RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 AP2S1P53680 142 aaPredicted RBP17.41■□□□□ 0.38
HOXA4-201ENST00000360046 PRCDQ00LT1 54 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 MFFQ9GZY8 342 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 C11orf1Q9H5F2 150 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 PLEKHA3Q9HB20 300 aa17.41■□□□□ 0.38
HOXA4-201ENST00000360046 A6NDX4 124 aa17.4■□□□□ 0.38
HOXA4-201ENST00000360046 BTBD17A6NE02 478 aa17.4■□□□□ 0.38
HOXA4-201ENST00000360046 GPR137BO60478 399 aa17.4■□□□□ 0.38
HOXA4-201ENST00000360046 P2RY1P47900 373 aa17.4■□□□□ 0.38
HOXA4-201ENST00000360046 COMPP49747 757 aaPredicted RBP17.4■□□□□ 0.38
HOXA4-201ENST00000360046 RPL23AP62750 156 aaKnown RBP17.4■□□□□ 0.38
HOXA4-201ENST00000360046 Q6YL49 198 aa17.4■□□□□ 0.38
HOXA4-201ENST00000360046 CIB3Q96Q77 187 aaPredicted RBP17.4■□□□□ 0.38
HOXA4-201ENST00000360046 HEYLQ9NQ87 328 aaPredicted RBP17.4■□□□□ 0.38
HOXA4-201ENST00000360046 ZC4H2Q9NQZ6 224 aa17.4■□□□□ 0.38
HOXA4-201ENST00000360046 TNFRSF19Q9NS68 423 aa17.4■□□□□ 0.38
HOXA4-201ENST00000360046 PSENENQ9NZ42 101 aa17.4■□□□□ 0.38
HOXA4-201ENST00000360046 WSB1Q9Y6I7 421 aa17.4■□□□□ 0.38
HOXA4-201ENST00000360046 RPL27AP46776 148 aaKnown RBP17.39■□□□□ 0.37
HOXA4-201ENST00000360046 PAX9P55771 341 aa17.39■□□□□ 0.37
HOXA4-201ENST00000360046 HIPK2Q9H2X6 1198 aa17.39■□□□□ 0.37
HOXA4-201ENST00000360046 NDUFA4L2Q9NRX3 87 aa17.39■□□□□ 0.37
HOXA4-201ENST00000360046 E7EUB6 86 aa17.38■□□□□ 0.37
HOXA4-201ENST00000360046 RPL12P30050 165 aaKnown RBP17.38■□□□□ 0.37
HOXA4-201ENST00000360046 C9orf62Q8N4C0 152 aa17.38■□□□□ 0.37
HOXA4-201ENST00000360046 OR2C3Q8N628 320 aa17.38■□□□□ 0.37
HOXA4-201ENST00000360046 OR5R1Q8NH85 324 aa17.38■□□□□ 0.37
HOXA4-201ENST00000360046 SMIM8Q96KF7 97 aa17.38■□□□□ 0.37
HOXA4-201ENST00000360046 GON7Q9BXV9 100 aa17.38■□□□□ 0.37
HOXA4-201ENST00000360046 LYRM2Q9NU23 88 aaPredicted RBP17.38■□□□□ 0.37
HOXA4-201ENST00000360046 CDC42EP3Q9UKI2 254 aa17.38■□□□□ 0.37
HOXA4-201ENST00000360046 HSPB11Q9Y547 144 aa17.38■□□□□ 0.37
HOXA4-201ENST00000360046 FAM24AA6NFZ4 105 aa17.38■□□□□ 0.37
HOXA4-201ENST00000360046 MSGN1A6NI15 193 aa17.38■□□□□ 0.37
HOXA4-201ENST00000360046 INAFM1C9JVW0 142 aa17.38■□□□□ 0.37
HOXA4-201ENST00000360046 CXCL2P19875 107 aa17.38■□□□□ 0.37
HOXA4-201ENST00000360046 TAS2R30P59541 319 aa17.38■□□□□ 0.37
HOXA4-201ENST00000360046 SPANXN5Q5MJ07 72 aa17.38■□□□□ 0.37
HOXA4-201ENST00000360046 ACOT7LQ6ZUV0 252 aa17.38■□□□□ 0.37
HOXA4-201ENST00000360046 SIGLECL1Q8N7X8 197 aa17.38■□□□□ 0.37
HOXA4-201ENST00000360046 C5orf56Q8N8D9 126 aa17.38■□□□□ 0.37
HOXA4-201ENST00000360046 OR10W1Q8NGF6 305 aa17.38■□□□□ 0.37
HOXA4-201ENST00000360046 SSMEM1Q8WWF3 244 aa17.38■□□□□ 0.37
HOXA4-201ENST00000360046 RNF222A6NCQ9 220 aa17.37■□□□□ 0.37
HOXA4-201ENST00000360046 FGF16O43320 207 aa17.37■□□□□ 0.37
HOXA4-201ENST00000360046 SRD5A1P18405 259 aa17.37■□□□□ 0.37
HOXA4-201ENST00000360046 VDAC2P45880 294 aaPredicted RBP17.37■□□□□ 0.37
HOXA4-201ENST00000360046 SSBP2P81877 361 aaPredicted RBP17.37■□□□□ 0.37
HOXA4-201ENST00000360046 SRSF12Q8WXF0 261 aaKnown RBP17.37■□□□□ 0.37
HOXA4-201ENST00000360046 PRDM13Q9H4Q3 707 aa17.37■□□□□ 0.37
HOXA4-201ENST00000360046 A0A1B0GW64 132 aa17.36■□□□□ 0.37
HOXA4-201ENST00000360046 CGB1A6NKQ9 187 aa17.36■□□□□ 0.37
HOXA4-201ENST00000360046 HOXA3O43365 443 aaPredicted RBP17.36■□□□□ 0.37
HOXA4-201ENST00000360046 TSC22D2O75157 780 aa17.36■□□□□ 0.37
HOXA4-201ENST00000360046 HLA-DRB1P01911 266 aa17.36■□□□□ 0.37
HOXA4-201ENST00000360046 HKR1P10072 659 aa17.36■□□□□ 0.37
HOXA4-201ENST00000360046 FXYD3Q14802 87 aa17.36■□□□□ 0.37
HOXA4-201ENST00000360046 LGALSLQ3ZCW2 172 aaPredicted RBP17.36■□□□□ 0.37
HOXA4-201ENST00000360046 LAMTOR1Q6IAA8 161 aa17.36■□□□□ 0.37
HOXA4-201ENST00000360046 RBMS3Q6XE24 437 aaKnown RBP17.36■□□□□ 0.37
HOXA4-201ENST00000360046 ABHD5Q8WTS1 349 aa17.36■□□□□ 0.37
HOXA4-201ENST00000360046 AQP10Q96PS8 301 aa17.36■□□□□ 0.37
HOXA4-201ENST00000360046 ANK3Q12955 4377 aaKnown RBP17.36■□□□□ 0.37
HOXA4-201ENST00000360046 A0A1W2PN81 502 aa17.35■□□□□ 0.37
HOXA4-201ENST00000360046 SH2D7A6NKC9 451 aaPredicted RBP17.35■□□□□ 0.37
HOXA4-201ENST00000360046 LY86O95711 162 aa17.35■□□□□ 0.37
HOXA4-201ENST00000360046 APELAP0DMC3 54 aa17.35■□□□□ 0.37
HOXA4-201ENST00000360046 CHRNA7P36544 502 aa17.35■□□□□ 0.37
HOXA4-201ENST00000360046 CX3CL1P78423 397 aa17.35■□□□□ 0.37
HOXA4-201ENST00000360046 TMEM267Q0VDI3 215 aaPredicted RBP17.35■□□□□ 0.37
HOXA4-201ENST00000360046 SCGB2A2Q13296 93 aa17.35■□□□□ 0.37
HOXA4-201ENST00000360046 ZNF562Q6V9R5 426 aa17.35■□□□□ 0.37
HOXA4-201ENST00000360046 SLC25A31Q9H0C2 315 aa17.35■□□□□ 0.37
HOXA4-201ENST00000360046 IGSF23A1L1A6 192 aa17.35■□□□□ 0.37
HOXA4-201ENST00000360046 IFNA10P01566 189 aa17.35■□□□□ 0.37
HOXA4-201ENST00000360046 OR2F1Q13607 317 aa17.35■□□□□ 0.37
HOXA4-201ENST00000360046 C16orf82Q7Z2V1 217 aa17.35■□□□□ 0.37
HOXA4-201ENST00000360046 TMEM252Q8N6L7 170 aa17.35■□□□□ 0.37
HOXA4-201ENST00000360046 ARPC1AQ92747 370 aa17.35■□□□□ 0.37
HOXA4-201ENST00000360046 VPREB3Q9UKI3 123 aa17.35■□□□□ 0.37
HOXA4-201ENST00000360046 STRAPQ9Y3F4 350 aaKnown RBP17.35■□□□□ 0.37
HOXA4-201ENST00000360046 NSD1Q96L73 2696 aaPredicted RBP17.35■□□□□ 0.37
HOXA4-201ENST00000360046 M0QZK8 103 aa17.34■□□□□ 0.37
HOXA4-201ENST00000360046 ZNF345Q14585 488 aa17.34■□□□□ 0.37
HOXA4-201ENST00000360046 MRPL41Q8IXM3 137 aaKnown RBP17.34■□□□□ 0.37
HOXA4-201ENST00000360046 OR4C12Q96R67 309 aa17.34■□□□□ 0.37
HOXA4-201ENST00000360046 HSPB9Q9BQS6 159 aa17.34■□□□□ 0.37
HOXA4-201ENST00000360046 FAM103A1Q9BTL3 118 aaKnown RBP17.34■□□□□ 0.37
HOXA4-201ENST00000360046 BOLA1Q9Y3E2 137 aa17.34■□□□□ 0.37
HOXA4-201ENST00000360046 IGHV7-81A0A0B4J1V7 117 aa17.33■□□□□ 0.37
HOXA4-201ENST00000360046 CST7O76096 145 aa17.33■□□□□ 0.37
HOXA4-201ENST00000360046 OR13C7P0DN81 318 aa17.33■□□□□ 0.37
HOXA4-201ENST00000360046 RPP30P78346 268 aaKnown RBP17.33■□□□□ 0.37
HOXA4-201ENST00000360046 ERHP84090 104 aaKnown RBP17.33■□□□□ 0.37
HOXA4-201ENST00000360046 EWSR1Q01844 656 aaKnown RBP eCLIP17.33■□□□□ 0.37
HOXA4-201ENST00000360046 WT1-ASQ06250 92 aa17.33■□□□□ 0.37
HOXA4-201ENST00000360046 STX12Q86Y82 276 aa17.33■□□□□ 0.37
HOXA4-201ENST00000360046 SLC24A4Q8NFF2 622 aa17.33■□□□□ 0.37
HOXA4-201ENST00000360046 ARL6Q9H0F7 186 aa17.33■□□□□ 0.37
HOXA4-201ENST00000360046 A0A0D9SG52 128 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms