RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 HEYLQ9NQ87 328 aaPredicted RBP14.84□□□□□ -0.03
CLN3-206ENST00000360019 KIAA1456Q9P272 454 aa14.84□□□□□ -0.03
CLN3-206ENST00000360019 FAM96BQ9Y3D0 163 aa14.84□□□□□ -0.03
CLN3-206ENST00000360019 SULT1A1P50225 295 aa14.83□□□□□ -0.04
CLN3-206ENST00000360019 DYNLT3P51808 116 aa14.83□□□□□ -0.04
CLN3-206ENST00000360019 PLGLAQ15195 96 aa14.83□□□□□ -0.04
CLN3-206ENST00000360019 OR10W1Q8NGF6 305 aa14.83□□□□□ -0.04
CLN3-206ENST00000360019 HIPK2Q9H2X6 1198 aa14.83□□□□□ -0.04
CLN3-206ENST00000360019 PLEKHA3Q9HB20 300 aa14.83□□□□□ -0.04
CLN3-206ENST00000360019 WFDC1Q9HC57 220 aa14.83□□□□□ -0.04
CLN3-206ENST00000360019 C15orf62A8K5M9 175 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 CFDP00746 253 aaPredicted RBP14.82□□□□□ -0.04
CLN3-206ENST00000360019 FBP1P09467 338 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 BPIFB3P59826 476 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 KRTAP1-1Q07627 177 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 ARL16Q0P5N6 197 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 TNXAQ16473 311 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 C5orf64Q2M2E5 130 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 HAPLN4Q86UW8 402 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 STX12Q86Y82 276 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 TMEM170AQ8WVE7 144 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 STRAPQ9Y3F4 350 aaKnown RBP14.82□□□□□ -0.04
CLN3-206ENST00000360019 NAV3Q8IVL0 2385 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 NCBP2LA6PVI3 153 aaKnown RBP14.82□□□□□ -0.04
CLN3-206ENST00000360019 TAAR5O14804 337 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 LY86O95711 162 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 CA2P00918 260 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 COMPP49747 757 aaPredicted RBP14.82□□□□□ -0.04
CLN3-206ENST00000360019 GNB1P62873 340 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 TEX261Q6UWH6 196 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 BCL6BQ8N143 479 aaPredicted RBP14.82□□□□□ -0.04
CLN3-206ENST00000360019 OR8H1Q8NGG4 311 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 OR5C1Q8NGR4 320 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 ENY2Q9NPA8 101 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 U3KQ87 197 aa14.82□□□□□ -0.04
CLN3-206ENST00000360019 PMS2P5A8MQ11 134 aa14.81□□□□□ -0.04
CLN3-206ENST00000360019 ACTL6BO94805 426 aa14.81□□□□□ -0.04
CLN3-206ENST00000360019 MAS1LP35410 378 aa14.81□□□□□ -0.04
CLN3-206ENST00000360019 RPL7L1Q6DKI1 246 aaKnown RBP14.81□□□□□ -0.04
CLN3-206ENST00000360019 NANPQ8TBE9 248 aa14.81□□□□□ -0.04
CLN3-206ENST00000360019 C22orf15Q8WYQ4 148 aa14.81□□□□□ -0.04
CLN3-206ENST00000360019 SSX3Q99909 188 aa14.81□□□□□ -0.04
CLN3-206ENST00000360019 PAIP2BQ9ULR5 123 aaKnown RBP14.81□□□□□ -0.04
CLN3-206ENST00000360019 MDFIC2A0A1B0GVS7 189 aa14.8□□□□□ -0.04
CLN3-206ENST00000360019 IFNA10P01566 189 aa14.8□□□□□ -0.04
CLN3-206ENST00000360019 CLINT1Q14677 625 aa14.8□□□□□ -0.04
CLN3-206ENST00000360019 STPG2Q8N412 459 aa14.8□□□□□ -0.04
CLN3-206ENST00000360019 Q8N9W7 124 aa14.8□□□□□ -0.04
CLN3-206ENST00000360019 ST8SIA2Q92186 375 aa14.8□□□□□ -0.04
CLN3-206ENST00000360019 INS-IGF2F8WCM5 200 aa14.8□□□□□ -0.04
CLN3-206ENST00000360019 RGS13O14921 159 aa14.8□□□□□ -0.04
CLN3-206ENST00000360019 RPL27AP46776 148 aaKnown RBP14.8□□□□□ -0.04
CLN3-206ENST00000360019 WT1-ASQ06250 92 aa14.8□□□□□ -0.04
CLN3-206ENST00000360019 LRRC75BQ2VPJ9 315 aa14.8□□□□□ -0.04
CLN3-206ENST00000360019 SLC24A4Q8NFF2 622 aa14.8□□□□□ -0.04
CLN3-206ENST00000360019 STOML3Q8TAV4 291 aa14.8□□□□□ -0.04
CLN3-206ENST00000360019 SONP18583 2426 aaKnown RBP14.8□□□□□ -0.04
CLN3-206ENST00000360019 UBA52P62987 128 aaKnown RBP14.79□□□□□ -0.04
CLN3-206ENST00000360019 DEFB112Q30KQ8 113 aa14.79□□□□□ -0.04
CLN3-206ENST00000360019 OR8G2PQ6IF36 304 aa14.79□□□□□ -0.04
CLN3-206ENST00000360019 C9orf139Q6ZV77 190 aa14.79□□□□□ -0.04
CLN3-206ENST00000360019 OR1S2Q8NGQ3 325 aa14.79□□□□□ -0.04
CLN3-206ENST00000360019 SRSF12Q8WXF0 261 aaKnown RBP14.79□□□□□ -0.04
CLN3-206ENST00000360019 A0A1W2PN81 502 aa14.78□□□□□ -0.04
CLN3-206ENST00000360019 CHRNA7P36544 502 aa14.78□□□□□ -0.04
CLN3-206ENST00000360019 BSXQ3C1V8 233 aa14.78□□□□□ -0.04
CLN3-206ENST00000360019 TMEM219Q86XT9 240 aa14.78□□□□□ -0.04
CLN3-206ENST00000360019 ZNF680Q8NEM1 530 aa14.78□□□□□ -0.04
CLN3-206ENST00000360019 C1RLQ9NZP8 487 aa14.78□□□□□ -0.04
CLN3-206ENST00000360019 IGLC7A0M8Q6 106 aa14.78□□□□□ -0.04
CLN3-206ENST00000360019 TEX22C9J3V5 150 aa14.78□□□□□ -0.04
CLN3-206ENST00000360019 H3BUX3 64 aa14.78□□□□□ -0.04
CLN3-206ENST00000360019 NPY1RP25929 384 aa14.78□□□□□ -0.04
CLN3-206ENST00000360019 RPP30P78346 268 aaKnown RBP14.78□□□□□ -0.04
CLN3-206ENST00000360019 EXOSC2Q13868 293 aaKnown RBP14.78□□□□□ -0.04
CLN3-206ENST00000360019 CD5LO43866 347 aa14.77□□□□□ -0.05
CLN3-206ENST00000360019 JTBO76095 146 aa14.77□□□□□ -0.05
CLN3-206ENST00000360019 OR8U8P0C7N1 319 aa14.77□□□□□ -0.05
CLN3-206ENST00000360019 TPT1P13693 172 aaKnown RBP14.77□□□□□ -0.05
CLN3-206ENST00000360019 HTR2BP41595 481 aa14.77□□□□□ -0.05
CLN3-206ENST00000360019 HBG1P69891 147 aa14.77□□□□□ -0.05
CLN3-206ENST00000360019 HBG2P69892 147 aa14.77□□□□□ -0.05
CLN3-206ENST00000360019 SLC38A11Q08AI6 406 aa14.77□□□□□ -0.05
CLN3-206ENST00000360019 AANATQ16613 207 aa14.77□□□□□ -0.05
CLN3-206ENST00000360019 UBAC2Q8NBM4 344 aa14.77□□□□□ -0.05
CLN3-206ENST00000360019 RBM14Q96PK6 669 aaKnown RBP14.77□□□□□ -0.05
CLN3-206ENST00000360019 ATP5SQ99766 215 aa14.77□□□□□ -0.05
CLN3-206ENST00000360019 SLC25A33Q9BSK2 321 aa14.77□□□□□ -0.05
CLN3-206ENST00000360019 PRSS46E5RG02 174 aa14.76□□□□□ -0.05
CLN3-206ENST00000360019 CNIH1O95406 144 aa14.76□□□□□ -0.05
CLN3-206ENST00000360019 APELAP0DMC3 54 aa14.76□□□□□ -0.05
CLN3-206ENST00000360019 OR13C7P0DN81 318 aa14.76□□□□□ -0.05
CLN3-206ENST00000360019 RNASE2P10153 161 aaKnown RBP14.76□□□□□ -0.05
CLN3-206ENST00000360019 ERHP84090 104 aaKnown RBP14.76□□□□□ -0.05
CLN3-206ENST00000360019 NDPQ00604 133 aa14.76□□□□□ -0.05
CLN3-206ENST00000360019 ALKAL2Q6UX46 152 aa14.76□□□□□ -0.05
CLN3-206ENST00000360019 BAP18Q8IXM2 172 aa14.76□□□□□ -0.05
CLN3-206ENST00000360019 OR10P1Q8NGE3 313 aa14.76□□□□□ -0.05
CLN3-206ENST00000360019 A6NDX4 124 aa14.76□□□□□ -0.05
CLN3-206ENST00000360019 AREGP15514 252 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms