RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 GLRXP35754 106 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 GCSAMLQ5JQS6 135 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 WDR82Q6UXN9 313 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 LOXL4Q96JB6 756 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 TMEM74BQ9NUR3 256 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 RNF115Q9Y4L5 304 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 SVILO95425 2214 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 LOC105371242A0A075B767 164 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 IGHV1-69-2A0A0G2JMI3 117 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 A0A1W2PR77 199 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 SFTPCP11686 197 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 FGF11Q92914 225 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 PILRBQ9UKJ0 227 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 H0YIZ8 118 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 SNAI2O43623 268 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 DNAL4O96015 105 aa12.53□□□□□ -0.4
CHD4-201ENST00000357008 ALPK2Q86TB3 2170 aa12.52□□□□□ -0.4
CHD4-201ENST00000357008 MIR17HGQ75NE6 70 aa12.52□□□□□ -0.4
CHD4-201ENST00000357008 RGPD4Q7Z3J3 1758 aa12.52□□□□□ -0.4
CHD4-201ENST00000357008 HIST1H2BKO60814 126 aa12.52□□□□□ -0.4
CHD4-201ENST00000357008 HIST1H2BJP06899 126 aa12.52□□□□□ -0.4
CHD4-201ENST00000357008 HIST1H2BOP23527 126 aa12.52□□□□□ -0.4
CHD4-201ENST00000357008 HIST1H2BBP33778 126 aa12.52□□□□□ -0.4
CHD4-201ENST00000357008 HIST1H2BDP58876 126 aa12.52□□□□□ -0.4
CHD4-201ENST00000357008 HIST1H2BCP62807 126 aa12.52□□□□□ -0.4
CHD4-201ENST00000357008 HIST2H2BEQ16778 126 aa12.52□□□□□ -0.4
CHD4-201ENST00000357008 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.52□□□□□ -0.4
CHD4-201ENST00000357008 CIARTQ8N365 385 aaPredicted RBP12.52□□□□□ -0.4
CHD4-201ENST00000357008 HIST1H2BHQ93079 126 aa12.52□□□□□ -0.4
CHD4-201ENST00000357008 SLC25A28Q96A46 364 aa12.52□□□□□ -0.4
CHD4-201ENST00000357008 HIST1H2BNQ99877 126 aa12.52□□□□□ -0.4
CHD4-201ENST00000357008 HIST1H2BMQ99879 126 aa12.52□□□□□ -0.4
CHD4-201ENST00000357008 AICDAQ9GZX7 198 aa12.52□□□□□ -0.4
CHD4-201ENST00000357008 PLXNB2O15031 1838 aa12.52□□□□□ -0.4
CHD4-201ENST00000357008 TBX6O95947 436 aaPredicted RBP12.52□□□□□ -0.41
CHD4-201ENST00000357008 OR13A1Q8NGR1 328 aa12.52□□□□□ -0.41
CHD4-201ENST00000357008 TMEM106BQ9NUM4 274 aa12.52□□□□□ -0.41
CHD4-201ENST00000357008 TRBV6-7A0A0A0MS04 114 aa12.52□□□□□ -0.41
CHD4-201ENST00000357008 TGFBR3LH3BV60 316 aa12.52□□□□□ -0.41
CHD4-201ENST00000357008 TIAF1O95411 115 aa12.52□□□□□ -0.41
CHD4-201ENST00000357008 CCL20P78556 96 aa12.52□□□□□ -0.41
CHD4-201ENST00000357008 RNASEH2CQ8TDP1 164 aaKnown RBP12.52□□□□□ -0.41
CHD4-201ENST00000357008 SPOCK3Q9BQ16 436 aa12.52□□□□□ -0.41
CHD4-201ENST00000357008 PPP1R32Q7Z5V6 425 aa12.51□□□□□ -0.41
CHD4-201ENST00000357008 ALKBH7Q9BT30 221 aaPredicted RBP12.51□□□□□ -0.41
CHD4-201ENST00000357008 J3QRE1 110 aa12.51□□□□□ -0.41
CHD4-201ENST00000357008 RFPL3SP0C7P2 107 aa12.51□□□□□ -0.41
CHD4-201ENST00000357008 CLDN16Q9Y5I7 305 aa12.51□□□□□ -0.41
CHD4-201ENST00000357008 GPR183P32249 361 aa12.51□□□□□ -0.41
CHD4-201ENST00000357008 ORMDL3Q8N138 153 aa12.51□□□□□ -0.41
CHD4-201ENST00000357008 FTH1P19P0C7X4 201 aa12.51□□□□□ -0.41
CHD4-201ENST00000357008 KLRB1Q12918 225 aa12.51□□□□□ -0.41
CHD4-201ENST00000357008 FOXC2Q99958 501 aa12.51□□□□□ -0.41
CHD4-201ENST00000357008 IGHV3OR16-12A0A075B7B8 117 aa12.51□□□□□ -0.41
CHD4-201ENST00000357008 LDLRAD4O15165 306 aa12.51□□□□□ -0.41
CHD4-201ENST00000357008 TSPAN13O95857 204 aa12.51□□□□□ -0.41
CHD4-201ENST00000357008 TMEM144Q7Z5S9 345 aa12.51□□□□□ -0.41
CHD4-201ENST00000357008 DICER1Q9UPY3 1922 aaKnown RBP12.5□□□□□ -0.41
CHD4-201ENST00000357008 HIGD1CA8MV81 97 aa12.5□□□□□ -0.41
CHD4-201ENST00000357008 RNASE1P07998 156 aaKnown RBP12.5□□□□□ -0.41
CHD4-201ENST00000357008 STARD6P59095 220 aa12.5□□□□□ -0.41
CHD4-201ENST00000357008 SCGB3A1Q96QR1 104 aa12.5□□□□□ -0.41
CHD4-201ENST00000357008 JKAMPQ9P055 326 aa12.5□□□□□ -0.41
CHD4-201ENST00000357008 IGHV3-35A0A0C4DH35 117 aa12.5□□□□□ -0.41
CHD4-201ENST00000357008 KBTBD11-OT1A0A1B0GTJ5 212 aa12.5□□□□□ -0.41
CHD4-201ENST00000357008 SNRPD3P62318 126 aaKnown RBP12.5□□□□□ -0.41
CHD4-201ENST00000357008 ZNF418Q8TF45 676 aaPredicted RBP12.5□□□□□ -0.41
CHD4-201ENST00000357008 ZNF703Q9H7S9 590 aaPredicted RBP12.5□□□□□ -0.41
CHD4-201ENST00000357008 TIMM23BQ5SRD1 257 aa12.5□□□□□ -0.41
CHD4-201ENST00000357008 HEPN1Q6WQI6 88 aa12.5□□□□□ -0.41
CHD4-201ENST00000357008 ADMP35318 185 aa12.5□□□□□ -0.41
CHD4-201ENST00000357008 FAM89BQ8N5H3 189 aa12.5□□□□□ -0.41
CHD4-201ENST00000357008 C5orf30Q96GV9 206 aa12.5□□□□□ -0.41
CHD4-201ENST00000357008 ASIPP42127 132 aa12.49□□□□□ -0.41
CHD4-201ENST00000357008 NEUROG3Q9Y4Z2 214 aa12.49□□□□□ -0.41
CHD4-201ENST00000357008 B9A039 149 aa12.49□□□□□ -0.41
CHD4-201ENST00000357008 ID3Q02535 119 aa12.49□□□□□ -0.41
CHD4-201ENST00000357008 STPG1Q5TH74 334 aa12.49□□□□□ -0.41
CHD4-201ENST00000357008 C10orf126Q8N4M7 172 aa12.49□□□□□ -0.41
CHD4-201ENST00000357008 PIKFYVEQ9Y2I7 2098 aa12.49□□□□□ -0.41
CHD4-201ENST00000357008 H7C1H1 209 aa12.49□□□□□ -0.41
CHD4-201ENST00000357008 C1QTNF9P0C862 333 aa12.49□□□□□ -0.41
CHD4-201ENST00000357008 VCX2Q9H322 139 aa12.49□□□□□ -0.41
CHD4-201ENST00000357008 FOXD3Q9UJU5 478 aaPredicted RBP12.49□□□□□ -0.41
CHD4-201ENST00000357008 SUMO2P61956 95 aaKnown RBP12.49□□□□□ -0.41
CHD4-201ENST00000357008 FAM90A1Q86YD7 464 aa12.49□□□□□ -0.41
CHD4-201ENST00000357008 FAM169BQ8N8A8 192 aa12.49□□□□□ -0.41
CHD4-201ENST00000357008 FADS6Q8N9I5 356 aa12.49□□□□□ -0.41
CHD4-201ENST00000357008 MRAP2Q96G30 205 aa12.49□□□□□ -0.41
CHD4-201ENST00000357008 OSTCQ9NRP0 149 aa12.49□□□□□ -0.41
CHD4-201ENST00000357008 M0R381 172 aa12.49□□□□□ -0.41
CHD4-201ENST00000357008 CECR9P0C854 216 aa12.49□□□□□ -0.41
CHD4-201ENST00000357008 CCL1P22362 96 aa12.49□□□□□ -0.41
CHD4-201ENST00000357008 AHCTF1Q8WYP5 2266 aa12.48□□□□□ -0.41
CHD4-201ENST00000357008 CEACAM4O75871 244 aa12.48□□□□□ -0.41
CHD4-201ENST00000357008 GTF3AQ92664 365 aaKnown RBP12.48□□□□□ -0.41
CHD4-201ENST00000357008 IGKV1D-13A0A0B4J2D9 117 aa12.48□□□□□ -0.41
CHD4-201ENST00000357008 NPFFO15130 113 aa12.48□□□□□ -0.41
CHD4-201ENST00000357008 CD5P06127 495 aa12.48□□□□□ -0.41
CHD4-201ENST00000357008 LINC00271P0C7V0 271 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms