RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 GNB1P62873 340 aa18.18■□□□□ 0.5
NKX2-1-201ENST00000354822 STPG3Q8N7X2 389 aa18.18■□□□□ 0.5
NKX2-1-201ENST00000354822 SSMEM1Q8WWF3 244 aa18.18■□□□□ 0.5
NKX2-1-201ENST00000354822 TMEM204Q9BSN7 226 aa18.18■□□□□ 0.5
NKX2-1-201ENST00000354822 SH3BGRL2Q9UJC5 107 aa18.18■□□□□ 0.5
NKX2-1-201ENST00000354822 CUL9Q8IWT3 2517 aa18.18■□□□□ 0.5
NKX2-1-201ENST00000354822 TEX50A0A1B0GTY4 177 aa18.17■□□□□ 0.5
NKX2-1-201ENST00000354822 SRRM4A7MD48 611 aaKnown RBP18.17■□□□□ 0.5
NKX2-1-201ENST00000354822 NDUFB3O43676 98 aa18.17■□□□□ 0.5
NKX2-1-201ENST00000354822 ATP5G3P48201 142 aa18.17■□□□□ 0.5
NKX2-1-201ENST00000354822 EFNB3Q15768 340 aa18.17■□□□□ 0.5
NKX2-1-201ENST00000354822 TMEM200BQ69YZ2 307 aa18.17■□□□□ 0.5
NKX2-1-201ENST00000354822 ZCCHC24Q8N2G6 241 aaKnown RBP18.17■□□□□ 0.5
NKX2-1-201ENST00000354822 TMEM106BQ9NUM4 274 aa18.17■□□□□ 0.5
NKX2-1-201ENST00000354822 BOD1L1Q8NFC6 3051 aa18.17■□□□□ 0.5
NKX2-1-201ENST00000354822 PPP5D1E7EU14 171 aa18.17■□□□□ 0.5
NKX2-1-201ENST00000354822 RBPJQ06330 500 aa18.17■□□□□ 0.5
NKX2-1-201ENST00000354822 C2orf83Q53S99 150 aa18.17■□□□□ 0.5
NKX2-1-201ENST00000354822 LRRC10Q5BKY1 277 aa18.17■□□□□ 0.5
NKX2-1-201ENST00000354822 FAM71F2Q6NXP2 309 aa18.17■□□□□ 0.5
NKX2-1-201ENST00000354822 C8orf31Q8N9H6 132 aa18.17■□□□□ 0.5
NKX2-1-201ENST00000354822 OR51M1Q9H341 326 aa18.17■□□□□ 0.5
NKX2-1-201ENST00000354822 TNFRSF13BO14836 293 aaPredicted RBP18.16■□□□□ 0.5
NKX2-1-201ENST00000354822 NDUFB4O95168 129 aa18.16■□□□□ 0.5
NKX2-1-201ENST00000354822 PRR20EP86478 221 aa18.16■□□□□ 0.5
NKX2-1-201ENST00000354822 PRR20CP86479 221 aa18.16■□□□□ 0.5
NKX2-1-201ENST00000354822 PRR20DP86480 221 aa18.16■□□□□ 0.5
NKX2-1-201ENST00000354822 PRR20BP86481 221 aa18.16■□□□□ 0.5
NKX2-1-201ENST00000354822 PRR20AP86496 221 aa18.16■□□□□ 0.5
NKX2-1-201ENST00000354822 NHLH1Q02575 133 aa18.16■□□□□ 0.5
NKX2-1-201ENST00000354822 TMEM144Q7Z5S9 345 aa18.16■□□□□ 0.5
NKX2-1-201ENST00000354822 LINC01551Q86U37 167 aa18.16■□□□□ 0.5
NKX2-1-201ENST00000354822 CCL17Q92583 94 aa18.16■□□□□ 0.5
NKX2-1-201ENST00000354822 YLPM1P49750 1951 aaKnown RBP18.16■□□□□ 0.5
NKX2-1-201ENST00000354822 APC2O95996 2303 aa18.16■□□□□ 0.5
NKX2-1-201ENST00000354822 KCNIP4Q6PIL6 250 aa18.15■□□□□ 0.5
NKX2-1-201ENST00000354822 NECAP1Q8NC96 275 aa18.15■□□□□ 0.5
NKX2-1-201ENST00000354822 OR5AN1Q8NGI8 311 aa18.15■□□□□ 0.5
NKX2-1-201ENST00000354822 OR1L8Q8NGR8 309 aa18.15■□□□□ 0.5
NKX2-1-201ENST00000354822 RNASE6Q93091 150 aaKnown RBP18.15■□□□□ 0.5
NKX2-1-201ENST00000354822 BTF3L4Q96K17 158 aa18.15■□□□□ 0.5
NKX2-1-201ENST00000354822 IFITM10A6NMD0 228 aa18.15■□□□□ 0.5
NKX2-1-201ENST00000354822 SAA1P0DJI8 122 aaPredicted RBP18.15■□□□□ 0.5
NKX2-1-201ENST00000354822 MYOD1P15172 320 aa18.15■□□□□ 0.5
NKX2-1-201ENST00000354822 FAM3BP58499 235 aaPredicted RBP18.15■□□□□ 0.5
NKX2-1-201ENST00000354822 TMEM177Q53S58 311 aa18.15■□□□□ 0.5
NKX2-1-201ENST00000354822 LINC00311Q8N616 119 aa18.15■□□□□ 0.5
NKX2-1-201ENST00000354822 RND1Q92730 232 aa18.15■□□□□ 0.5
NKX2-1-201ENST00000354822 RP1L1Q8IWN7 2480 aaPredicted RBP18.15■□□□□ 0.5
NKX2-1-201ENST00000354822 ZGRF1Q86YA3 2104 aa18.15■□□□□ 0.5
NKX2-1-201ENST00000354822 FABP1P07148 127 aa18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 GCHFRP30047 84 aa18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 PRR30Q53SZ7 412 aaPredicted RBP18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 OR2T10Q8NGZ9 312 aa18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 ZNF596Q8TC21 504 aa18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 WFIKKN1Q96NZ8 548 aa18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 IMMP2LQ96T52 175 aa18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 MRPL20Q9BYC9 149 aaKnown RBP18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 PITPNC1Q9UKF7 332 aa18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 H0YJW9 148 aa18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 GGCTO75223 188 aaKnown RBP18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 CCL3L1P16619 93 aa18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 IGFBP2P18065 325 aa18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 HIST3H2BBQ8N257 126 aa18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 OR4X1Q8NH49 305 aa18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 TMEM186Q96B77 213 aa18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 FLYWCH2Q96CP2 140 aaKnown RBP18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 HARBI1Q96MB7 349 aa18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 CHODLQ9H9P2 273 aa18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 SEPSECSQ9HD40 501 aaKnown RBP18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 KAAG1Q9UBP8 84 aa18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 SLC45A2Q9UMX9 530 aa18.14■□□□□ 0.49
NKX2-1-201ENST00000354822 OR4A5Q8NH83 315 aa18.13■□□□□ 0.49
NKX2-1-201ENST00000354822 SLC35E1Q96K37 410 aa18.13■□□□□ 0.49
NKX2-1-201ENST00000354822 C19orf24Q9BVV8 132 aa18.13■□□□□ 0.49
NKX2-1-201ENST00000354822 GSN-AS1Q9NRJ2 163 aa18.13■□□□□ 0.49
NKX2-1-201ENST00000354822 ZNRD1Q9P1U0 126 aa18.13■□□□□ 0.49
NKX2-1-201ENST00000354822 INS-IGF2F8WCM5 200 aa18.13■□□□□ 0.49
NKX2-1-201ENST00000354822 C4orf17Q53FE4 359 aa18.13■□□□□ 0.49
NKX2-1-201ENST00000354822 VSTM2AQ8TAG5 236 aa18.13■□□□□ 0.49
NKX2-1-201ENST00000354822 H1FXQ92522 213 aaKnown RBP18.13■□□□□ 0.49
NKX2-1-201ENST00000354822 COMMD5Q9GZQ3 224 aa18.13■□□□□ 0.49
NKX2-1-201ENST00000354822 ARL2-SNX15V9GYD0 113 aa18.13■□□□□ 0.49
NKX2-1-201ENST00000354822 MGAQ8IWI9 3026 aa18.12■□□□□ 0.49
NKX2-1-201ENST00000354822 FAM87AP0C7U9 286 aa18.12■□□□□ 0.49
NKX2-1-201ENST00000354822 LINC00869P0C866 280 aa18.12■□□□□ 0.49
NKX2-1-201ENST00000354822 USF1P22415 310 aaPredicted RBP18.12■□□□□ 0.49
NKX2-1-201ENST00000354822 LCN2P80188 198 aa18.12■□□□□ 0.49
NKX2-1-201ENST00000354822 ERHP84090 104 aaKnown RBP18.12■□□□□ 0.49
NKX2-1-201ENST00000354822 OR4C13Q8NGP0 309 aa18.12■□□□□ 0.49
NKX2-1-201ENST00000354822 OR10X1Q8NGY0 326 aa18.12■□□□□ 0.49
NKX2-1-201ENST00000354822 DYNLRB1Q9NP97 96 aa18.12■□□□□ 0.49
NKX2-1-201ENST00000354822 NBEAQ8NFP9 2946 aa18.12■□□□□ 0.49
NKX2-1-201ENST00000354822 TYMSP04818 313 aa18.11■□□□□ 0.49
NKX2-1-201ENST00000354822 SOD3P08294 240 aa18.11■□□□□ 0.49
NKX2-1-201ENST00000354822 RPL8P62917 257 aaKnown RBP18.11■□□□□ 0.49
NKX2-1-201ENST00000354822 CTAG1AP78358 180 aa18.11■□□□□ 0.49
NKX2-1-201ENST00000354822 PDPNQ86YL7 162 aa18.11■□□□□ 0.49
NKX2-1-201ENST00000354822 PCGF1Q9BSM1 259 aa18.11■□□□□ 0.49
NKX2-1-201ENST00000354822 NDUFA4L2Q9NRX3 87 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms