RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 BTN1A1Q13410 526 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 LINC00303Q3SY05 128 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 CD200R1LQ6Q8B3 271 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 TOMM5Q8N4H5 51 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 LINC01555Q8NAE3 123 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 OR10D3Q8NH80 312 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 LINC01560Q8TB33 94 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 DEDD2Q8WXF8 326 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 HYLS1Q96M11 299 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 EBPLQ9BY08 206 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 PECRQ9BY49 303 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 EIF5A2Q9GZV4 153 aaKnown RBP1.03□□□□□ -2.24
BRCA1-202ENST00000354071 FAIMQ9NVQ4 179 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 BABAM2Q9NXR7 383 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 COMMD3Q9UBI1 195 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 DNAH9Q9NYC9 4486 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF532Q9HCE3 1301 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 MYOM3Q5VTT5 1437 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 ADGRL3Q9HAR2 1447 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 LRRC37AA6NMS7 1700 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 TMED7-TICAM2A0A0A6YYA0 188 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 IGHV7-4-1A0A0J9YVY3 117 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 TMEM223A0PJW6 202 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 FUOMA2VDF0 154 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 INMT-MINDY4F8WBC2 141 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 M0QYV0 167 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 IFNA21P01568 189 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 TRGV3P03979 118 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 SHBGP04278 402 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 GYPCP04921 128 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 DBIP07108 87 aaKnown RBP1.03□□□□□ -2.24
BRCA1-202ENST00000354071 LINC00869P0C866 280 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 UCHL3P15374 230 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 S100A3P33764 101 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 MP68P56378 58 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 MRPS10P82664 201 aaKnown RBP1.03□□□□□ -2.24
BRCA1-202ENST00000354071 TMEM267Q0VDI3 215 aaPredicted RBP1.03□□□□□ -2.24
BRCA1-202ENST00000354071 ARHGAP11BQ3KRB8 267 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 GUSBP11Q6P575 273 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 Q6ZRU5 148 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 OLIG3Q7RTU3 272 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 SLC25A45Q8N413 288 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 OR1M1Q8NGA1 313 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 OR52L1Q8NGH7 329 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 OR9I1Q8NGQ6 314 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 APOBEC3DQ96AK3 386 aaPredicted RBP1.03□□□□□ -2.24
BRCA1-202ENST00000354071 MALSU1Q96EH3 234 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 PPP3R2Q96LZ3 170 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 LINC00477Q96M19 166 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 PBDC1Q9BVG4 233 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 TBL1XR1Q9BZK7 514 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 RPP21Q9H633 154 aaKnown RBP1.03□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF430Q9H8G1 570 aaPredicted RBP1.03□□□□□ -2.24
BRCA1-202ENST00000354071 TMEM216Q9P0N5 145 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 POLR1DQ9Y2S0 133 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 SAMHD1Q9Y3Z3 626 aaKnown RBP1.03□□□□□ -2.24
BRCA1-202ENST00000354071 MED23Q9ULK4 1368 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 MRC1P22897 1456 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 SHANK1Q9Y566 2161 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.03□□□□□ -2.24
BRCA1-202ENST00000354071 BORCS7-ASMTA0A0B4J1R7 106 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 MDFIC2A0A1B0GVS7 189 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 PDCD5O14737 125 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 TAAR5O14804 337 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 ACOX3O15254 700 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 HMGN1P05114 100 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 TFPTP0C1Z6 253 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 CECR9P0C854 216 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 MPIP34949 423 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 DAPP51397 102 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 AQP4P55087 323 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 LINC00313P59037 77 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 TPI1P60174 286 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 ATP5G2Q06055 141 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF181Q2M3W8 571 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 MRPL2Q5T653 305 aaKnown RBP1.03□□□□□ -2.24
BRCA1-202ENST00000354071 SYPL2Q5VXT5 272 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 SPINK14Q6IE38 97 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 ZCCHC23Q6ZST2 131 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 TMEM144Q7Z5S9 345 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF561Q8N587 486 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 Q8N7P7 452 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 ZDHHC22Q8N966 263 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 ZFP62Q8NB50 900 aaPredicted RBP1.03□□□□□ -2.24
BRCA1-202ENST00000354071 OR2Z1Q8NG97 314 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 HOPXQ9BPY8 73 aaPredicted RBP1.03□□□□□ -2.24
BRCA1-202ENST00000354071 CCDC32Q9BV29 185 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 DCSTAMPQ9H295 470 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 LINC00597Q9H2U6 94 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 CKLFQ9UBR5 152 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 DKKL1Q9UK85 242 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 CELA1Q9UNI1 258 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 NRCAMQ92823 1304 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 ANKRD50Q9ULJ7 1429 aa1.03□□□□□ -2.24
BRCA1-202ENST00000354071 ZFYVE26Q68DK2 2539 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 IGHV2-26A0A0B4J1V2 119 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 C3orf84H3BNL1 204 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 BPY2O14599 106 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 TCAPO15273 167 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 EIF1BO60739 113 aaKnown RBP1.03□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms