RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 FNDC4Q9H6D8 234 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-201ENST00000352993 SH2D2AQ9NP31 389 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 ENY2Q9NPA8 101 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 ZNF355PQ9NSJ1 428 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 MYO15AQ9UKN7 3530 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 SAA2-SAA4A0A096LPE2 208 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 C5orf67F2Z3F1 127 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 CDIPTO14735 213 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 MPDU1O75352 247 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 GATA2P23769 480 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-201ENST00000352993 FABP6P51161 128 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 ERVK-16P61578 105 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 ZNF718Q3SXZ3 478 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 CXorf67Q86X51 503 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-201ENST00000352993 WDR54Q9H977 334 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 CHODLQ9H9P2 273 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 SAP30LQ9HAJ7 183 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 C9JCJ5 164 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 PPIAL4DF5H284 164 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 GOSR1O95249 250 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 P04436 131 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 OR9G9P0C7N8 305 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 BVES-AS1Q5T3Y7 98 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 LINC00596Q86U02 117 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 SCCPDHQ8NBX0 429 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 EXPH5Q8NEV8 1989 aa6.35□□□□□ -1.39
BRCA1-201ENST00000352993 CEP290O15078 2479 aa6.34□□□□□ -1.39
BRCA1-201ENST00000352993 CELA3BP08861 270 aa6.34□□□□□ -1.39
BRCA1-201ENST00000352993 TEPPQ6URK8 271 aa6.34□□□□□ -1.39
BRCA1-201ENST00000352993 PHF7Q9BWX1 381 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-201ENST00000352993 NPVFQ9HCQ7 196 aa6.34□□□□□ -1.39
BRCA1-201ENST00000352993 DNAJC13O75165 2243 aa6.34□□□□□ -1.39
BRCA1-201ENST00000352993 TRBV6-6A0A0A6YYG2 114 aa6.34□□□□□ -1.39
BRCA1-201ENST00000352993 HBZP02008 142 aa6.34□□□□□ -1.39
BRCA1-201ENST00000352993 TFF1P04155 84 aa6.34□□□□□ -1.39
BRCA1-201ENST00000352993 GDF1P27539 372 aa6.34□□□□□ -1.39
BRCA1-201ENST00000352993 FOXG1P55316 489 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-201ENST00000352993 RPS19BP1Q86WX3 136 aaKnown RBP6.34□□□□□ -1.39
BRCA1-201ENST00000352993 NANOS1Q8WY41 292 aaKnown RBP6.34□□□□□ -1.39
BRCA1-201ENST00000352993 TMEM191AQ9H0A3 160 aa6.34□□□□□ -1.39
BRCA1-201ENST00000352993 OSTCQ9NRP0 149 aa6.34□□□□□ -1.39
BRCA1-201ENST00000352993 PEF1Q9UBV8 284 aaKnown RBP6.34□□□□□ -1.39
BRCA1-201ENST00000352993 TRAV8-6A0A0B4J262 113 aa6.34□□□□□ -1.4
BRCA1-201ENST00000352993 IZUMO1RA6ND01 250 aa6.34□□□□□ -1.4
BRCA1-201ENST00000352993 C12orf77C9JDV5 145 aa6.34□□□□□ -1.4
BRCA1-201ENST00000352993 CORTO00230 105 aa6.34□□□□□ -1.4
BRCA1-201ENST00000352993 LEPROTL1O95214 131 aa6.34□□□□□ -1.4
BRCA1-201ENST00000352993 CD27P26842 260 aa6.34□□□□□ -1.4
BRCA1-201ENST00000352993 CLDN18P56856 261 aa6.34□□□□□ -1.4
BRCA1-201ENST00000352993 EDDM3AQ14507 147 aa6.34□□□□□ -1.4
BRCA1-201ENST00000352993 VWC2Q2TAL6 325 aa6.34□□□□□ -1.4
BRCA1-201ENST00000352993 ZNF497Q6ZNH5 498 aa6.34□□□□□ -1.4
BRCA1-201ENST00000352993 SPACA3Q8IXA5 215 aa6.34□□□□□ -1.4
BRCA1-201ENST00000352993 FAM168AQ92567 244 aa6.34□□□□□ -1.4
BRCA1-201ENST00000352993 SARAFQ96BY9 339 aa6.34□□□□□ -1.4
BRCA1-201ENST00000352993 TNFRSF19Q9NS68 423 aa6.34□□□□□ -1.4
BRCA1-201ENST00000352993 TMEM30CPA0ZSE6 113 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 ZNF716A6NP11 495 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 LINC00473A8K010 186 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 H0YJW9 148 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 J3QT63 122 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 GNG7O60262 68 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 CSN3P07498 182 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 CD24P25063 80 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 GPR12P47775 334 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 RHOGP84095 191 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 HES3Q5TGS1 186 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 TMEM251Q8N6I4 163 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 ZBTB34Q8NCN2 500 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 SGK494Q96LW2 274 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 ZNF576Q9H609 170 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 GNG12Q9UBI6 72 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 C7orf71A4D174 169 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 REG1AP05451 166 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 IGFBP2P18065 325 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 PPOXP50336 477 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 ZNF137PP52743 207 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 HOXA4Q00056 320 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-201ENST00000352993 Q6P435 159 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 DEFB125Q8N687 156 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 Q8N7P7 452 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 RNF138Q8WVD3 245 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 RAB37Q96AX2 223 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 LINC00479Q96M42 142 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 RTL8AQ9BWD3 113 aa6.33□□□□□ -1.4
BRCA1-201ENST00000352993 A0A0G2JMM0 328 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 A0A1W2PPB8 328 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 KIR3DP1A8MWS1 328 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 NPIPB11E5RHQ5 1161 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 RPL24P83731 157 aaKnown RBP6.32□□□□□ -1.4
BRCA1-201ENST00000352993 LINC00173Q6ZV60 143 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 GTF2H5Q6ZYL4 71 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 TMEM167BQ9NRX6 74 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 MRPL27Q9P0M9 148 aaKnown RBP6.32□□□□□ -1.4
BRCA1-201ENST00000352993 MPC1Q9Y5U8 109 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 EYSQ5T1H1 3165 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 COL5A1P20908 1838 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-201ENST00000352993 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 ARG2P78540 354 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 TRIP6Q15654 476 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms