RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 TMEM128Q5BJH2 165 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 NMSQ5H8A3 153 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 LIN54Q6MZP7 749 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 MZT2BQ6NZ67 158 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 ZNF562Q6V9R5 426 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 LYZL2Q7Z4W2 148 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 SLC35E3Q7Z769 313 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 LYG2Q86SG7 212 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 STPG2Q8N412 459 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 SLC35G3Q8N808 338 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 LRTM2Q8N967 370 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 MINDY2Q8NBR6 621 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 OR4F5Q8NH21 305 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 CD300LFQ8TDQ1 290 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 TMEM158Q8WZ71 300 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 GPR146Q96CH1 333 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 SCGB3A2Q96PL1 93 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 OR2A7Q96R45 310 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 ALX4Q9H161 411 aaPredicted RBP4.61□□□□□ -1.67
SSX3-201ENST00000298396 PARP11Q9NR21 331 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 TMEM14BQ9NUH8 114 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 KIAA1456Q9P272 454 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 ZNF580Q9UK33 172 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 NUBP2Q9Y5Y2 271 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 WSB1Q9Y6I7 421 aa4.61□□□□□ -1.67
SSX3-201ENST00000298396 MGAM2Q2M2H8 2515 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 TEX50A0A1B0GTY4 177 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 IGLC7A0M8Q6 106 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 HMX3A6NHT5 357 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 C15orf61A6NNL5 157 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 MPTX1A8MV57 137 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 B3GALNT1O75752 331 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 HLA-AP01891 365 aaKnown RBP4.6□□□□□ -1.67
SSX3-201ENST00000298396 OPN1MWP04001 364 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 SERPINE2P07093 398 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 APELAP0DMC3 54 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 OPN1MW2P0DN77 364 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 OPN1MW3P0DN78 364 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 CD28P10747 220 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 AREGP15514 252 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 HLA-GP17693 338 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 S100GP29377 79 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 PPIFP30405 207 aaKnown RBP4.6□□□□□ -1.67
SSX3-201ENST00000298396 GNB1P62873 340 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 RPL8P62917 257 aaKnown RBP4.6□□□□□ -1.67
SSX3-201ENST00000298396 DEFA5Q01523 94 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 FOXL1Q12952 345 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 DCTN2Q13561 401 aaKnown RBP4.6□□□□□ -1.67
SSX3-201ENST00000298396 FXYD3Q14802 87 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 PLGLAQ15195 96 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 TRIM16LQ309B1 348 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 AARDQ4LEZ3 155 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 CT83Q5H943 113 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 TMEM268Q5VZI3 342 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 C18orf65Q6ZTR6 163 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 ZNF329Q86UD4 541 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 FAM219AQ8IW50 185 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 FOXRED2Q8IWF2 684 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 SGPP2Q8IWX5 399 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 MMD2Q8IY49 270 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 DMBX1Q8NFW5 382 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 OR10W1Q8NGF6 305 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 OR4A5Q8NH83 315 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 OR2T6Q8NHC8 308 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 SGMS2Q8NHU3 365 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 GRPEL2Q8TAA5 225 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 CASTOR1Q8WTX7 329 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 SRSF12Q8WXF0 261 aaKnown RBP4.6□□□□□ -1.67
SSX3-201ENST00000298396 ARPC1AQ92747 370 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 RBPMSQ93062 196 aaKnown RBP4.6□□□□□ -1.67
SSX3-201ENST00000298396 IL22RA2Q969J5 263 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 MARVELD1Q9BSK0 173 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 QTRT1Q9BXR0 403 aaKnown RBP4.6□□□□□ -1.67
SSX3-201ENST00000298396 PALMDQ9NP74 551 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 FOXA2Q9Y261 457 aaPredicted RBP4.6□□□□□ -1.67
SSX3-201ENST00000298396 DMRT1Q9Y5R6 373 aa4.6□□□□□ -1.67
SSX3-201ENST00000298396 NOTCH1P46531 2555 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 NBEAL1Q6ZS30 2694 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 TRAV41A0A0B4J266 112 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 A0A0B4J2A0 478 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 MSGN1A6NI15 193 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 INMT-MINDY4F8WBC2 141 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 AP4M1O00189 453 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 ST8SIA3O43173 380 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 KCNAB3O43448 404 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 PITX3O75364 302 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 ADAP1O75689 374 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 PTTG1O95997 202 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 IGHG4P01861 327 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 IL5P05113 134 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 REG1AP05451 166 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 FGF2P09038 288 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 MAS1LP35410 378 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 RPL27AP46776 148 aaKnown RBP4.59□□□□□ -1.67
SSX3-201ENST00000298396 MFAP2P55001 183 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 ERVK-16P61578 105 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 WT1-ASQ06250 92 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 ECSCRQ19T08 205 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 RNF151Q2KHN1 245 aa4.59□□□□□ -1.67
SSX3-201ENST00000298396 GAGE13Q4V321 117 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms