RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 BTNL8Q6UX41 500 aa13.03□□□□□ -0.32
TFF3-201ENST00000291525 RBPMS2Q6ZRY4 209 aaKnown RBP13.03□□□□□ -0.32
TFF3-201ENST00000291525 GDPD1Q8N9F7 314 aa13.03□□□□□ -0.32
TFF3-201ENST00000291525 OR1L8Q8NGR8 309 aa13.03□□□□□ -0.32
TFF3-201ENST00000291525 OR5H2Q8NGV7 314 aa13.03□□□□□ -0.32
TFF3-201ENST00000291525 MOB3AQ96BX8 217 aa13.03□□□□□ -0.32
TFF3-201ENST00000291525 ZNF2Q9BSG1 426 aaPredicted RBP13.03□□□□□ -0.32
TFF3-201ENST00000291525 MARCH11A6NNE9 402 aa13.02□□□□□ -0.33
TFF3-201ENST00000291525 SCAF4O95104 1147 aaKnown RBP13.02□□□□□ -0.33
TFF3-201ENST00000291525 RLN1P04808 185 aa13.02□□□□□ -0.33
TFF3-201ENST00000291525 S100GP29377 79 aa13.02□□□□□ -0.33
TFF3-201ENST00000291525 GNRHRP30968 328 aa13.02□□□□□ -0.33
TFF3-201ENST00000291525 TM4SF20Q53R12 229 aa13.02□□□□□ -0.33
TFF3-201ENST00000291525 SLC38A6Q8IZM9 456 aa13.02□□□□□ -0.33
TFF3-201ENST00000291525 SAMD12Q8N8I0 201 aa13.02□□□□□ -0.33
TFF3-201ENST00000291525 OR1L6Q8NGR2 347 aa13.02□□□□□ -0.33
TFF3-201ENST00000291525 GGTLC1Q9BX51 225 aa13.02□□□□□ -0.33
TFF3-201ENST00000291525 GAR1Q9NY12 217 aaKnown RBP13.02□□□□□ -0.33
TFF3-201ENST00000291525 ANAPC10Q9UM13 185 aa13.02□□□□□ -0.33
TFF3-201ENST00000291525 LOC102724200A0A096LPH7 203 aaPredicted RBP13.01□□□□□ -0.33
TFF3-201ENST00000291525 TGOLN2O43493 480 aa13.01□□□□□ -0.33
TFF3-201ENST00000291525 PGLYRP1O75594 196 aaPredicted RBP13.01□□□□□ -0.33
TFF3-201ENST00000291525 SNAPC5O75971 98 aa13.01□□□□□ -0.33
TFF3-201ENST00000291525 SERPINE2P07093 398 aa13.01□□□□□ -0.33
TFF3-201ENST00000291525 C8orf88P0DMB2 117 aa13.01□□□□□ -0.33
TFF3-201ENST00000291525 OR13C7P0DN81 318 aa13.01□□□□□ -0.33
TFF3-201ENST00000291525 RPA2P15927 270 aa13.01□□□□□ -0.33
TFF3-201ENST00000291525 TAS2R20P59543 309 aa13.01□□□□□ -0.33
TFF3-201ENST00000291525 ZNF585BQ52M93 769 aa13.01□□□□□ -0.33
TFF3-201ENST00000291525 SLC25A24Q6NUK1 477 aa13.01□□□□□ -0.33
TFF3-201ENST00000291525 SPSB3Q6PJ21 355 aa13.01□□□□□ -0.33
TFF3-201ENST00000291525 UNQ9165/PRO28630Q6UXU0 137 aa13.01□□□□□ -0.33
TFF3-201ENST00000291525 CADM3Q8N126 398 aa13.01□□□□□ -0.33
TFF3-201ENST00000291525 OR10W1Q8NGF6 305 aa13.01□□□□□ -0.33
TFF3-201ENST00000291525 LSM10Q969L4 123 aaKnown RBP13.01□□□□□ -0.33
TFF3-201ENST00000291525 BSCL2Q96G97 398 aaPredicted RBP13.01□□□□□ -0.33
TFF3-201ENST00000291525 ATP6V0BQ99437 205 aa13.01□□□□□ -0.33
TFF3-201ENST00000291525 ZNF436Q9C0F3 470 aaPredicted RBP13.01□□□□□ -0.33
TFF3-201ENST00000291525 GPR31O00270 319 aa13□□□□□ -0.33
TFF3-201ENST00000291525 PMP2P02689 132 aa13□□□□□ -0.33
TFF3-201ENST00000291525 NAT1P18440 290 aa13□□□□□ -0.33
TFF3-201ENST00000291525 PRSS3P35030 304 aa13□□□□□ -0.33
TFF3-201ENST00000291525 RFX2P48378 723 aa13□□□□□ -0.33
TFF3-201ENST00000291525 OR6F1Q8NGZ6 308 aa13□□□□□ -0.33
TFF3-201ENST00000291525 DGCR14Q96DF8 476 aaKnown RBP13□□□□□ -0.33
TFF3-201ENST00000291525 SPAG8Q99932 426 aaPredicted RBP13□□□□□ -0.33
TFF3-201ENST00000291525 HINT2Q9BX68 163 aa13□□□□□ -0.33
TFF3-201ENST00000291525 C5orf66Q9H5L9 145 aa13□□□□□ -0.33
TFF3-201ENST00000291525 FKBP11Q9NYL4 201 aa13□□□□□ -0.33
TFF3-201ENST00000291525 PRNDQ9UKY0 176 aa13□□□□□ -0.33
TFF3-201ENST00000291525 SELENOKQ9Y6D0 94 aa13□□□□□ -0.33
TFF3-201ENST00000291525 IGHV3-35A0A0C4DH35 117 aa12.99□□□□□ -0.33
TFF3-201ENST00000291525 TEX50A0A1B0GTY4 177 aa12.99□□□□□ -0.33
TFF3-201ENST00000291525 OR2T8A6NH00 312 aa12.99□□□□□ -0.33
TFF3-201ENST00000291525 RPS19P39019 145 aaKnown RBP12.99□□□□□ -0.33
TFF3-201ENST00000291525 LPAR6P43657 344 aa12.99□□□□□ -0.33
TFF3-201ENST00000291525 LAMTOR1Q6IAA8 161 aa12.99□□□□□ -0.33
TFF3-201ENST00000291525 LPCAT3Q6P1A2 487 aa12.99□□□□□ -0.33
TFF3-201ENST00000291525 OR2C3Q8N628 320 aa12.99□□□□□ -0.33
TFF3-201ENST00000291525 TMEM190Q8WZ59 177 aa12.99□□□□□ -0.33
TFF3-201ENST00000291525 TMEM56Q96MV1 263 aa12.99□□□□□ -0.33
TFF3-201ENST00000291525 TSC22D3Q99576 134 aa12.99□□□□□ -0.33
TFF3-201ENST00000291525 DAZ1Q9NQZ3 744 aaKnown RBP12.99□□□□□ -0.33
TFF3-201ENST00000291525 NDUFA4L2Q9NRX3 87 aa12.99□□□□□ -0.33
TFF3-201ENST00000291525 OR51B2Q9Y5P1 312 aa12.99□□□□□ -0.33
TFF3-201ENST00000291525 F11RQ9Y624 299 aaKnown RBP12.99□□□□□ -0.33
TFF3-201ENST00000291525 CSMD3Q7Z407 3707 aa12.99□□□□□ -0.33
TFF3-201ENST00000291525 RYR2Q92736 4967 aa12.98□□□□□ -0.33
TFF3-201ENST00000291525 STARD9Q9P2P6 4700 aa12.98□□□□□ -0.33
TFF3-201ENST00000291525 NDUFA4O00483 81 aa12.98□□□□□ -0.33
TFF3-201ENST00000291525 KRASP01116 189 aa12.98□□□□□ -0.33
TFF3-201ENST00000291525 TGFBR1P36897 503 aa12.98□□□□□ -0.33
TFF3-201ENST00000291525 WT1-ASQ06250 92 aa12.98□□□□□ -0.33
TFF3-201ENST00000291525 OR5B3Q8NH48 314 aa12.98□□□□□ -0.33
TFF3-201ENST00000291525 FCAMRQ8WWV6 532 aa12.98□□□□□ -0.33
TFF3-201ENST00000291525 FXYD6Q9H0Q3 95 aa12.98□□□□□ -0.33
TFF3-201ENST00000291525 FAM212BQ9NTI7 297 aaPredicted RBP12.98□□□□□ -0.33
TFF3-201ENST00000291525 C21orf62Q9NYP8 219 aa12.98□□□□□ -0.33
TFF3-201ENST00000291525 LYSTQ99698 3801 aa12.97□□□□□ -0.33
TFF3-201ENST00000291525 A0A087WXM4 84 aa12.97□□□□□ -0.33
TFF3-201ENST00000291525 SMIM31A0A1B0GVY4 71 aa12.97□□□□□ -0.33
TFF3-201ENST00000291525 HRH1P35367 487 aa12.97□□□□□ -0.33
TFF3-201ENST00000291525 G6PCP35575 357 aa12.97□□□□□ -0.33
TFF3-201ENST00000291525 APOC4P55056 127 aa12.97□□□□□ -0.33
TFF3-201ENST00000291525 TSPAN5P62079 268 aa12.97□□□□□ -0.33
TFF3-201ENST00000291525 LSM3P62310 102 aaKnown RBP12.97□□□□□ -0.33
TFF3-201ENST00000291525 YIPF6Q96EC8 236 aa12.97□□□□□ -0.33
TFF3-201ENST00000291525 TSPAN4O14817 238 aa12.96□□□□□ -0.33
TFF3-201ENST00000291525 TNFAIP8O95379 198 aa12.96□□□□□ -0.33
TFF3-201ENST00000291525 Q56UQ5 140 aa12.96□□□□□ -0.33
TFF3-201ENST00000291525 UBAC2Q8NBM4 344 aa12.96□□□□□ -0.33
TFF3-201ENST00000291525 CMTM3Q96MX0 182 aa12.96□□□□□ -0.33
TFF3-201ENST00000291525 SCPEP1Q9HB40 452 aa12.96□□□□□ -0.33
TFF3-201ENST00000291525 NSG2Q9Y328 171 aa12.96□□□□□ -0.33
TFF3-201ENST00000291525 SACSQ9NZJ4 4579 aa12.96□□□□□ -0.34
TFF3-201ENST00000291525 HLA-DMAP28067 261 aa12.95□□□□□ -0.34
TFF3-201ENST00000291525 PHLDA2Q53GA4 152 aa12.95□□□□□ -0.34
TFF3-201ENST00000291525 GPX8Q8TED1 209 aa12.95□□□□□ -0.34
TFF3-201ENST00000291525 SCARB1Q8WTV0 552 aa12.95□□□□□ -0.34
TFF3-201ENST00000291525 SLC25A46Q96AG3 418 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms