RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 SRD5A1P18405 259 aa9.71□□□□□ -0.85
PTPN4-201ENST00000263708 FHITP49789 147 aa9.71□□□□□ -0.85
PTPN4-201ENST00000263708 WFDC12Q8WWY7 111 aa9.71□□□□□ -0.85
PTPN4-201ENST00000263708 C7orf69Q9H7B7 122 aa9.71□□□□□ -0.85
PTPN4-201ENST00000263708 LAMB2P55268 1798 aa9.71□□□□□ -0.85
PTPN4-201ENST00000263708 NABP2Q9BQ15 211 aa9.71□□□□□ -0.85
PTPN4-201ENST00000263708 DMRTA1Q5VZB9 504 aa9.71□□□□□ -0.85
PTPN4-201ENST00000263708 KLF14Q8TD94 323 aaPredicted RBP9.71□□□□□ -0.85
PTPN4-201ENST00000263708 H0YL77 283 aa9.71□□□□□ -0.86
PTPN4-201ENST00000263708 ST20Q9HBF5 79 aa9.71□□□□□ -0.86
PTPN4-201ENST00000263708 ABCA4P78363 2273 aa9.71□□□□□ -0.86
PTPN4-201ENST00000263708 COLCA1Q6ZS62 124 aa9.71□□□□□ -0.86
PTPN4-201ENST00000263708 ISXQ2M1V0 245 aa9.71□□□□□ -0.86
PTPN4-201ENST00000263708 ORAOV1Q8WV07 137 aa9.71□□□□□ -0.86
PTPN4-201ENST00000263708 B9A039 149 aa9.71□□□□□ -0.86
PTPN4-201ENST00000263708 TMEM155Q4W5P6 130 aa9.71□□□□□ -0.86
PTPN4-201ENST00000263708 SEPSECSQ9HD40 501 aaKnown RBP9.71□□□□□ -0.86
PTPN4-201ENST00000263708 IGKV1D-42A0A075B6H8 117 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 SPINT1O43278 529 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 DRD3P35462 400 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 CLDN16Q9Y5I7 305 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 NIT1Q86X76 327 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 FMC1Q96HJ9 113 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 VKORC1Q9BQB6 163 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 C19orf24Q9BVV8 132 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 DOCK8Q8NF50 2099 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 ADAMTSL3P82987 1691 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 LILRA1O75019 489 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 IL6RP08887 468 aaPredicted RBP9.7□□□□□ -0.86
PTPN4-201ENST00000263708 ZNF79Q15937 498 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 BCORQ6W2J9 1755 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 RPL39P5Q59GN2 51 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 COX14Q96I36 57 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 KLHDC2Q9Y2U9 406 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 WNT2BQ93097 391 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 COX11Q9Y6N1 276 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 V9GYH0 126 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 SFXN3Q9BWM7 321 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 NPCDR1Q9BY65 106 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 SPTBN2O15020 2390 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 ZNF250P15622 560 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 PLXNA1Q9UIW2 1896 aa9.7□□□□□ -0.86
PTPN4-201ENST00000263708 FAM27BQ5VT28 67 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 FAM57AQ8TBR7 257 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 TNRC6CQ9HCJ0 1690 aaKnown RBP9.69□□□□□ -0.86
PTPN4-201ENST00000263708 IGLV3-16A0A075B6K0 115 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 A0A0J9YW62 118 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 PLNP26678 52 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 GCHFRP30047 84 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 GPR132Q9UNW8 380 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 PGPEP1LA6NFU8 196 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 CD300CQ08708 224 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 FER1L6-AS1Q8NA97 138 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 FXYD1O00168 92 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 EVI2AP22794 236 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 ZNF600Q6ZNG1 722 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 TMEM252Q8N6L7 170 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 ZIC1Q15915 447 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 FBXL15Q9H469 300 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 DLEC1Q9Y238 1755 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 GLIPR1P48060 266 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 DLL3Q9NYJ7 618 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 TCF19Q9Y242 345 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 A0A1B0GUT8 65 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 M0R2P5 195 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 PTP4A3O75365 173 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 FNDC4Q9H6D8 234 aaPredicted RBP9.69□□□□□ -0.86
PTPN4-201ENST00000263708 APOBEC3AP31941 199 aaPredicted RBP9.69□□□□□ -0.86
PTPN4-201ENST00000263708 GAGE2EQ4V326 116 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 OR13A1Q8NGR1 328 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 GAGE2DQ9UEU5 116 aa9.69□□□□□ -0.86
PTPN4-201ENST00000263708 PATJQ8NI35 1801 aa9.68□□□□□ -0.86
PTPN4-201ENST00000263708 ZPLD1Q8TCW7 415 aa9.68□□□□□ -0.86
PTPN4-201ENST00000263708 ZNF257Q9Y2Q1 563 aa9.68□□□□□ -0.86
PTPN4-201ENST00000263708 PRB3Q04118 309 aaPredicted RBP9.68□□□□□ -0.86
PTPN4-201ENST00000263708 ZAR1Q86SH2 424 aa9.68□□□□□ -0.86
PTPN4-201ENST00000263708 ZNRF1Q8ND25 227 aa9.68□□□□□ -0.86
PTPN4-201ENST00000263708 TBR1Q16650 682 aa9.68□□□□□ -0.86
PTPN4-201ENST00000263708 ABCA7Q8IZY2 2146 aa9.68□□□□□ -0.86
PTPN4-201ENST00000263708 IGHV3-73A0A0B4J1V6 119 aa9.68□□□□□ -0.86
PTPN4-201ENST00000263708 ZNF729A6NN14 1252 aaPredicted RBP9.68□□□□□ -0.86
PTPN4-201ENST00000263708 ZNF585BQ52M93 769 aa9.68□□□□□ -0.86
PTPN4-201ENST00000263708 LRRK1Q38SD2 2015 aa9.68□□□□□ -0.86
PTPN4-201ENST00000263708 MYOD1P15172 320 aa9.68□□□□□ -0.86
PTPN4-201ENST00000263708 A0A087WX48 190 aa9.68□□□□□ -0.86
PTPN4-201ENST00000263708 GCM2O75603 506 aaPredicted RBP9.68□□□□□ -0.86
PTPN4-201ENST00000263708 ATP1A1-AS1Q5TC04 95 aa9.68□□□□□ -0.86
PTPN4-201ENST00000263708 VWC2LB2RUY7 222 aa9.67□□□□□ -0.86
PTPN4-201ENST00000263708 PTGDSP41222 190 aa9.67□□□□□ -0.86
PTPN4-201ENST00000263708 HIST1H2BAQ96A08 127 aa9.67□□□□□ -0.86
PTPN4-201ENST00000263708 PRADC1Q9BSG0 188 aa9.67□□□□□ -0.86
PTPN4-201ENST00000263708 JPT1Q9UK76 154 aa9.67□□□□□ -0.86
PTPN4-201ENST00000263708 SELENOKQ9Y6D0 94 aa9.67□□□□□ -0.86
PTPN4-201ENST00000263708 PAX4O43316 350 aa9.67□□□□□ -0.86
PTPN4-201ENST00000263708 ORMDL3Q8N138 153 aa9.67□□□□□ -0.86
PTPN4-201ENST00000263708 MEGF9Q9H1U4 602 aa9.67□□□□□ -0.86
PTPN4-201ENST00000263708 LGALS1P09382 135 aaKnown RBP9.67□□□□□ -0.86
PTPN4-201ENST00000263708 ZNF703Q9H7S9 590 aaPredicted RBP9.67□□□□□ -0.86
PTPN4-201ENST00000263708 DTX4Q9Y2E6 619 aa9.67□□□□□ -0.86
PTPN4-201ENST00000263708 CGAP01215 116 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms