RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 A0A1B0GX30 115 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 TMEM30CPA0ZSE6 113 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 DNAJC9-AS1A6NH13 148 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 COLCA2A8K830 154 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 ODF3BA8MYP8 253 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 TRDCB7Z8K6 153 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 C12orf77C9JDV5 145 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 FAM90A26D6RGX4 464 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 NPIPB11E5RHQ5 1161 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 M0QZK8 103 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 SDCBPO00560 298 aaPredicted RBP4.24□□□□□ -1.73
SHMT1-211ENST00000618902 NAPSAO96009 420 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 PPYP01298 95 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 IFNA5P01569 189 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 PRH1P02810 166 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 HSPB1P04792 205 aaKnown RBP4.24□□□□□ -1.73
SHMT1-211ENST00000618902 SFTA3P0C7M3 94 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 IGHV1-8P0DP01 117 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 CAMLGP49069 296 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 RPL23AP62750 156 aaKnown RBP4.24□□□□□ -1.73
SHMT1-211ENST00000618902 VAMP2P63027 116 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 CTAG1AP78358 180 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 PNRC1Q12796 327 aaPredicted RBP4.24□□□□□ -1.73
SHMT1-211ENST00000618902 GUK1Q16774 197 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 DEFB112Q30KQ8 113 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 FBLN7Q53RD9 439 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 KHDC3LQ587J8 217 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 DNLZQ5SXM8 178 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 RPL7L1Q6DKI1 246 aaKnown RBP4.24□□□□□ -1.73
SHMT1-211ENST00000618902 ZNF880Q6PDB4 577 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 ATRAIDQ6UW56 229 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 HEPN1Q6WQI6 88 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 MOB1BQ7L9L4 216 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 LHFPL4Q7Z7J7 247 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 C8orf31Q8N9H6 132 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 OR4D5Q8NGN0 318 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 OR4A4PQ8NGN8 299 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 OR1L1Q8NH94 360 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 ZNF596Q8TC21 504 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 TCTEX1D2Q8WW35 142 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 LSM10Q969L4 123 aaKnown RBP4.24□□□□□ -1.73
SHMT1-211ENST00000618902 PINX1Q96BK5 328 aaKnown RBP4.24□□□□□ -1.73
SHMT1-211ENST00000618902 ZNF714Q96N38 554 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 P2RX4Q99571 388 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 EIF5A2Q9GZV4 153 aaKnown RBP4.24□□□□□ -1.73
SHMT1-211ENST00000618902 PARP12Q9H0J9 701 aaKnown RBP4.24□□□□□ -1.73
SHMT1-211ENST00000618902 C16orf95Q9H693 158 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 Q9N2K0 584 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 MBNL3Q9NUK0 354 aaKnown RBP4.24□□□□□ -1.73
SHMT1-211ENST00000618902 CALYQ9NYX4 217 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 KIAA1456Q9P272 454 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 METTL1Q9UBP6 276 aaKnown RBP4.24□□□□□ -1.73
SHMT1-211ENST00000618902 FBXL17Q9UF56 701 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 AK3Q9UIJ7 227 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 VPREB3Q9UKI3 123 aa4.24□□□□□ -1.73
SHMT1-211ENST00000618902 IGHV2-26A0A0B4J1V2 119 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 IGHV3-43A0A0B4J1X8 118 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 IGKV1-6A0A0C4DH72 117 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 A0A1W2PPE3 182 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 CLPSL1A2RUU4 121 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 MSGN1A6NI15 193 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 FAM74A7A6NL05 159 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 ZNF729A6NN14 1252 aaPredicted RBP4.23□□□□□ -1.73
SHMT1-211ENST00000618902 H0Y980 276 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 F2RL2O00254 374 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 WRBO00258 174 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 TIMM23O14925 209 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 SLC31A2O15432 143 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 PITX3O75364 302 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 TUSC2O75896 110 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 IGHV3-7P01780 117 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 MBP02144 154 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 OR5AC1P0C628 307 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 OR8U9P0C7N5 309 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 SMIM6P0DI80 62 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 IGHV3-43DP0DP04 118 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 PRRX1P54821 245 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 LOXL3P58215 753 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 HBG1P69891 147 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 HBG2P69892 147 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 CLINT1Q14677 625 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 SSX2Q16385 188 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 ATP6V1FQ16864 119 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 LTC4SQ16873 150 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 FAM74A3Q4VXF1 159 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 AWAT1Q58HT5 328 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 SOHLH1Q5JUK2 328 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 Q6ZRG5 221 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 SLC35E3Q7Z769 313 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 STX12Q86Y82 276 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 FAM219AQ8IW50 185 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 H1FOOQ8IZA3 346 aaPredicted RBP4.23□□□□□ -1.73
SHMT1-211ENST00000618902 ZNF439Q8NDP4 499 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 OR52M1Q8NGK5 317 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 OR4P4Q8NGL7 312 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 NEK7Q8TDX7 302 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 MAFIPQ8WZ33 124 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 TAF15Q92804 592 aaKnown RBP eCLIP4.23□□□□□ -1.73
SHMT1-211ENST00000618902 LEAP2Q969E1 77 aa4.23□□□□□ -1.73
SHMT1-211ENST00000618902 DUX5Q96PT3 197 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 252.1 ms