RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 ASCL2Q99929 193 aa13.88□□□□□ -0.19
VCX3A-203ENST00000612369 COMMD5Q9GZQ3 224 aa13.88□□□□□ -0.19
VCX3A-203ENST00000612369 TENM3Q9P273 2699 aa13.87□□□□□ -0.19
VCX3A-203ENST00000612369 GPR31O00270 319 aa13.87□□□□□ -0.19
VCX3A-203ENST00000612369 GGCTO75223 188 aaKnown RBP13.87□□□□□ -0.19
VCX3A-203ENST00000612369 GABARAPO95166 117 aa13.87□□□□□ -0.19
VCX3A-203ENST00000612369 AREGP15514 252 aa13.87□□□□□ -0.19
VCX3A-203ENST00000612369 ELK1P19419 428 aa13.87□□□□□ -0.19
VCX3A-203ENST00000612369 HLA-DMAP28067 261 aa13.87□□□□□ -0.19
VCX3A-203ENST00000612369 HRH1P35367 487 aa13.87□□□□□ -0.19
VCX3A-203ENST00000612369 OR2B8PP59922 312 aa13.87□□□□□ -0.19
VCX3A-203ENST00000612369 TSPAN5P62079 268 aa13.87□□□□□ -0.19
VCX3A-203ENST00000612369 LCN12Q6JVE5 192 aa13.87□□□□□ -0.19
VCX3A-203ENST00000612369 HAPLN4Q86UW8 402 aa13.87□□□□□ -0.19
VCX3A-203ENST00000612369 OR2K2Q8NGT1 345 aa13.87□□□□□ -0.19
VCX3A-203ENST00000612369 TMEM140Q9NV12 185 aa13.87□□□□□ -0.19
VCX3A-203ENST00000612369 CGB1A6NKQ9 187 aa13.86□□□□□ -0.19
VCX3A-203ENST00000612369 A8MZ25 164 aa13.86□□□□□ -0.19
VCX3A-203ENST00000612369 HPGDSO60760 199 aa13.86□□□□□ -0.19
VCX3A-203ENST00000612369 S1PR2O95136 353 aa13.86□□□□□ -0.19
VCX3A-203ENST00000612369 RLN1P04808 185 aa13.86□□□□□ -0.19
VCX3A-203ENST00000612369 FRMD6-AS1P0C7T7 363 aa13.86□□□□□ -0.19
VCX3A-203ENST00000612369 SMIM18P0DKX4 95 aa13.86□□□□□ -0.19
VCX3A-203ENST00000612369 DEFA4P12838 97 aa13.86□□□□□ -0.19
VCX3A-203ENST00000612369 S100GP29377 79 aa13.86□□□□□ -0.19
VCX3A-203ENST00000612369 RCVRNP35243 200 aa13.86□□□□□ -0.19
VCX3A-203ENST00000612369 ERVK-16P61578 105 aa13.86□□□□□ -0.19
VCX3A-203ENST00000612369 CTF1Q16619 201 aa13.86□□□□□ -0.19
VCX3A-203ENST00000612369 HSD17B13Q7Z5P4 300 aaPredicted RBP13.86□□□□□ -0.19
VCX3A-203ENST00000612369 SNX29P2Q8IUI4 249 aa13.86□□□□□ -0.19
VCX3A-203ENST00000612369 Q8N1Y9 231 aa13.86□□□□□ -0.19
VCX3A-203ENST00000612369 Q8N402 240 aa13.86□□□□□ -0.19
VCX3A-203ENST00000612369 DGCR14Q96DF8 476 aaKnown RBP13.86□□□□□ -0.19
VCX3A-203ENST00000612369 FXYD6Q9H0Q3 95 aa13.86□□□□□ -0.19
VCX3A-203ENST00000612369 DMRT1Q9Y5R6 373 aa13.86□□□□□ -0.19
VCX3A-203ENST00000612369 IGLV11-55A0A075B6I3 123 aa13.85□□□□□ -0.19
VCX3A-203ENST00000612369 TRAV3A0A0B4J244 114 aa13.85□□□□□ -0.19
VCX3A-203ENST00000612369 MARCH11A6NNE9 402 aa13.85□□□□□ -0.19
VCX3A-203ENST00000612369 TPPPO94811 219 aa13.85□□□□□ -0.19
VCX3A-203ENST00000612369 MYOD1P15172 320 aa13.85□□□□□ -0.19
VCX3A-203ENST00000612369 ZNF182P17025 639 aaPredicted RBP13.85□□□□□ -0.19
VCX3A-203ENST00000612369 MECP2P51608 486 aaKnown RBP13.85□□□□□ -0.19
VCX3A-203ENST00000612369 SBSPONQ8IVN8 264 aa13.85□□□□□ -0.19
VCX3A-203ENST00000612369 SGPP2Q8IWX5 399 aa13.85□□□□□ -0.19
VCX3A-203ENST00000612369 EEF1AKMT3Q96AZ1 226 aa13.85□□□□□ -0.19
VCX3A-203ENST00000612369 CXorf58Q96LI9 332 aa13.85□□□□□ -0.19
VCX3A-203ENST00000612369 QTRT1Q9BXR0 403 aaKnown RBP13.85□□□□□ -0.19
VCX3A-203ENST00000612369 FAM212BQ9NTI7 297 aaPredicted RBP13.85□□□□□ -0.19
VCX3A-203ENST00000612369 THYN1Q9P016 225 aa13.85□□□□□ -0.19
VCX3A-203ENST00000612369 IGLC7A0M8Q6 106 aa13.84□□□□□ -0.19
VCX3A-203ENST00000612369 LGALS9O00182 355 aa13.84□□□□□ -0.19
VCX3A-203ENST00000612369 CYB5BO43169 146 aa13.84□□□□□ -0.19
VCX3A-203ENST00000612369 NDUFB8O95169 186 aa13.84□□□□□ -0.19
VCX3A-203ENST00000612369 LPAR6P43657 344 aa13.84□□□□□ -0.19
VCX3A-203ENST00000612369 UCP3P55916 312 aa13.84□□□□□ -0.19
VCX3A-203ENST00000612369 C19orf35Q6ZS72 473 aa13.84□□□□□ -0.19
VCX3A-203ENST00000612369 GPHB5Q86YW7 130 aa13.84□□□□□ -0.19
VCX3A-203ENST00000612369 MRPS26Q9BYN8 205 aaKnown RBP13.84□□□□□ -0.19
VCX3A-203ENST00000612369 TRBV7-1A0A0A6YYK4 115 aa13.83□□□□□ -0.2
VCX3A-203ENST00000612369 FAM25AB3EWG3 89 aa13.83□□□□□ -0.2
VCX3A-203ENST00000612369 FAM25CB3EWG5 89 aa13.83□□□□□ -0.2
VCX3A-203ENST00000612369 FAM25GB3EWG6 89 aa13.83□□□□□ -0.2
VCX3A-203ENST00000612369 PPP5D1E7EU14 171 aa13.83□□□□□ -0.2
VCX3A-203ENST00000612369 TRAPPC2P0DI81 140 aa13.83□□□□□ -0.2
VCX3A-203ENST00000612369 TRAPPC2BP0DI82 140 aa13.83□□□□□ -0.2
VCX3A-203ENST00000612369 IGHV4-30-4P0DP06 118 aa13.83□□□□□ -0.2
VCX3A-203ENST00000612369 GTSCR1Q86UQ5 136 aa13.83□□□□□ -0.2
VCX3A-203ENST00000612369 OR1L8Q8NGR8 309 aa13.83□□□□□ -0.2
VCX3A-203ENST00000612369 C15orf40Q8WUR7 153 aa13.83□□□□□ -0.2
VCX3A-203ENST00000612369 FCAMRQ8WWV6 532 aa13.83□□□□□ -0.2
VCX3A-203ENST00000612369 CCDC140Q96MF4 163 aa13.83□□□□□ -0.2
VCX3A-203ENST00000612369 NAA50Q9GZZ1 169 aaKnown RBP13.83□□□□□ -0.2
VCX3A-203ENST00000612369 ZMAT4Q9H898 229 aa13.83□□□□□ -0.2
VCX3A-203ENST00000612369 KRASP01116 189 aa13.82□□□□□ -0.2
VCX3A-203ENST00000612369 REG1AP05451 166 aa13.82□□□□□ -0.2
VCX3A-203ENST00000612369 ARL3P36405 182 aa13.82□□□□□ -0.2
VCX3A-203ENST00000612369 FAM106AQ4KMX7 169 aa13.82□□□□□ -0.2
VCX3A-203ENST00000612369 ZNF585BQ52M93 769 aa13.82□□□□□ -0.2
VCX3A-203ENST00000612369 GPR107Q5VW38 600 aa13.82□□□□□ -0.2
VCX3A-203ENST00000612369 CLEC19AQ6UXS0 136 aa13.82□□□□□ -0.2
VCX3A-203ENST00000612369 SLC38A6Q8IZM9 456 aa13.82□□□□□ -0.2
VCX3A-203ENST00000612369 TSC22D3Q99576 134 aa13.82□□□□□ -0.2
VCX3A-203ENST00000612369 THAP7Q9BT49 309 aaPredicted RBP13.82□□□□□ -0.2
VCX3A-203ENST00000612369 C19orf73Q9NVV2 129 aa13.82□□□□□ -0.2
VCX3A-203ENST00000612369 STAB2Q8WWQ8 2551 aa13.81□□□□□ -0.2
VCX3A-203ENST00000612369 TEX50A0A1B0GTY4 177 aa13.81□□□□□ -0.2
VCX3A-203ENST00000612369 SNAPC5O75971 98 aa13.81□□□□□ -0.2
VCX3A-203ENST00000612369 OR2C1O95371 312 aa13.81□□□□□ -0.2
VCX3A-203ENST00000612369 RPA2P15927 270 aa13.81□□□□□ -0.2
VCX3A-203ENST00000612369 LAX1Q8IWV1 398 aa13.81□□□□□ -0.2
VCX3A-203ENST00000612369 NDUFA4L2Q9NRX3 87 aa13.81□□□□□ -0.2
VCX3A-203ENST00000612369 FKBP11Q9NYL4 201 aa13.81□□□□□ -0.2
VCX3A-203ENST00000612369 TECRQ9NZ01 308 aaKnown RBP13.81□□□□□ -0.2
VCX3A-203ENST00000612369 PRNDQ9UKY0 176 aa13.81□□□□□ -0.2
VCX3A-203ENST00000612369 C2orf70A6NJV1 201 aa13.8□□□□□ -0.2
VCX3A-203ENST00000612369 IGHV3-23P01764 117 aa13.8□□□□□ -0.2
VCX3A-203ENST00000612369 HLA-AP01891 365 aaKnown RBP13.8□□□□□ -0.2
VCX3A-203ENST00000612369 SERPINE2P07093 398 aa13.8□□□□□ -0.2
VCX3A-203ENST00000612369 TBPP20226 339 aa13.8□□□□□ -0.2
VCX3A-203ENST00000612369 PTBP1P26599 531 aaKnown RBP eCLIP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms