RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.2□□□□□ -1.9
RNF38-210ENST00000611646 LEMD1Q68G75 181 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 MIR17HGQ75NE6 70 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 WFDC3Q8IUB2 231 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 OR1L8Q8NGR8 309 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 TMEM171Q8WVE6 324 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 NPIPB3Q92617 1050 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 HIST1H2BHQ93079 126 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 C14orf144Q96I85 54 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 HIST1H2BNQ99877 126 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 HIST1H2BMQ99879 126 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 RNASE7Q9H1E1 156 aaKnown RBP3.2□□□□□ -1.9
RNF38-210ENST00000611646 CNOT1A5YKK6 2376 aaKnown RBP3.2□□□□□ -1.9
RNF38-210ENST00000611646 CHD9Q3L8U1 2897 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 NOTCH4Q99466 2003 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 PPIAL4EA0A075B759 164 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 IGHV3OR16-10A0A075B7F0 116 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 IGHV3-66A0A0C4DH42 116 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 ZNF716A6NP11 495 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 PPIAL4DF5H284 164 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 C16orf97H3BN30 126 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 CA11O75493 328 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 IL6RP08887 468 aaPredicted RBP3.2□□□□□ -1.9
RNF38-210ENST00000611646 PPIAL4FP0DN26 164 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 ANOS1P23352 680 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 ACP1P24666 158 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 CD24P25063 80 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 CD40P25942 277 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 NMUP48645 174 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 LHX2P50458 406 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 PRRX1P54821 245 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 CLDN18P56856 261 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 ERVFRD-1P60508 538 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 C20orf204Q6ZNR8 217 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 MMD2Q8IY49 270 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 FAM89BQ8N5H3 189 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 EIF4E3Q8N5X7 224 aaKnown RBP3.2□□□□□ -1.9
RNF38-210ENST00000611646 ZBTB34Q8NCN2 500 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 GTF3AQ92664 365 aaKnown RBP3.2□□□□□ -1.9
RNF38-210ENST00000611646 NABP2Q9BQ15 211 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 CHRDL1Q9BU40 450 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 DERL1Q9BUN8 251 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 UBTD1Q9HAC8 227 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 PPIAL4AQ9Y536 164 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 DMRT1Q9Y5R6 373 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 ROS1P08922 2347 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 FER1L5A0AVI2 2057 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 IGHV3-49A0A0A0MS15 119 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 A0A0G2JRQ6 117 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 OR4C46A6NHA9 309 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 IGLV3-19P01714 112 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 FAM87AP0C7U9 286 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 BRS3P32247 399 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 SRP14P37108 136 aaKnown RBP3.2□□□□□ -1.9
RNF38-210ENST00000611646 RPL8P62917 257 aaKnown RBP3.2□□□□□ -1.9
RNF38-210ENST00000611646 CTAG1AP78358 180 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 ACP7Q6ZNF0 438 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 GUCD1Q96NT3 240 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 SSBP4Q9BWG4 385 aaPredicted RBP3.2□□□□□ -1.9
RNF38-210ENST00000611646 PKIBQ9C010 78 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 BET1LQ9NYM9 111 aa3.2□□□□□ -1.9
RNF38-210ENST00000611646 C9orf172C9J069 976 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 NAPSAO96009 420 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 CD3EP07766 207 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 GCHFRP30047 84 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 RPL23P62829 140 aaKnown RBP3.19□□□□□ -1.9
RNF38-210ENST00000611646 GNG5P63218 68 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 RELBQ01201 579 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 ASPHD1Q5U4P2 390 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 PCSK4Q6UW60 755 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 GGNQ86UU5 652 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 LHFPL1Q86WI0 220 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 OR4D5Q8NGN0 318 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 LSM10Q969L4 123 aaKnown RBP3.19□□□□□ -1.9
RNF38-210ENST00000611646 RAB37Q96AX2 223 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 ADTRPQ96IZ2 230 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 PMCHL2Q9BQD1 86 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 GSX1Q9H4S2 264 aaPredicted RBP3.19□□□□□ -1.9
RNF38-210ENST00000611646 SDF2L1Q9HCN8 221 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 FOXD3Q9UJU5 478 aaPredicted RBP3.19□□□□□ -1.9
RNF38-210ENST00000611646 GOLT1BQ9Y3E0 138 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 HEATR5AQ86XA9 2040 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 FAM90A10PA6NDY2 464 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 FAM90A18PA6NE21 464 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 FAM90A16PA6NEW6 464 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 WIPF3A6NGB9 483 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 FAM90A20PA6NIJ5 464 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 PRR19A6NJB7 356 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 FAM90A8PA6NJQ4 464 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 FAM90A7PA6NKC0 464 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 FAM90A22PA8MWA6 464 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 FAM90A12PA8MX19 464 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 FAM90A5PA8MXJ8 464 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 FAM90A23PA8MXZ1 464 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 RBFOX2O43251 390 aaKnown RBP eCLIP3.19□□□□□ -1.9
RNF38-210ENST00000611646 SIAH2O43255 324 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 CD5P06127 495 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 FAM90A15PP0C7V4 464 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 FAM90A13PP0C7W8 464 aa3.19□□□□□ -1.9
RNF38-210ENST00000611646 FAM90A14PP0C7W9 464 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms