RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 KBTBD11O94819 623 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 HSPE1P61604 102 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 VMA21Q3ZAQ7 101 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 CCDC144NLQ6NUI1 221 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 LHFPL4Q7Z7J7 247 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 STX12Q86Y82 276 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 C1orf159Q96HA4 380 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 RNF5Q99942 180 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 SMIM3Q9BZL3 60 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 B4DSR2 109 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 IGLV2-23P01705 113 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 MSMBP08118 114 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 CD1BP29016 333 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 SULT1A1P50225 295 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 SPANXN5Q5MJ07 72 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 BAP18Q8IXM2 172 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 SVBPQ8N300 66 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 ZDHHC16Q969W1 377 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 CLCC1Q96S66 551 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 TCF19Q9Y242 345 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 ZNF257Q9Y2Q1 563 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 HILPDAQ9Y5L2 63 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 OR51B2Q9Y5P1 312 aa14.23□□□□□ -0.13
SHKBP1-224ENST00000600718 UTP20O75691 2785 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-224ENST00000600718 H3BP45 60 aa14.22□□□□□ -0.13
SHKBP1-224ENST00000600718 TIMM23O14925 209 aa14.22□□□□□ -0.13
SHKBP1-224ENST00000600718 FAM74A1Q5RGS3 127 aa14.22□□□□□ -0.13
SHKBP1-224ENST00000600718 RPL7L1Q6DKI1 246 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-224ENST00000600718 TMEM167AQ8TBQ9 72 aa14.22□□□□□ -0.13
SHKBP1-224ENST00000600718 MLXQ9UH92 298 aa14.22□□□□□ -0.13
SHKBP1-224ENST00000600718 ARID1AO14497 2285 aa14.22□□□□□ -0.13
SHKBP1-224ENST00000600718 BORCS7-ASMTA0A0B4J1R7 106 aa14.22□□□□□ -0.13
SHKBP1-224ENST00000600718 TMEM218A2RU14 115 aa14.22□□□□□ -0.13
SHKBP1-224ENST00000600718 CST7O76096 145 aa14.22□□□□□ -0.13
SHKBP1-224ENST00000600718 HABP2Q14520 560 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-224ENST00000600718 HIST2H2BCQ6DN03 193 aa14.22□□□□□ -0.13
SHKBP1-224ENST00000600718 TEX45Q8NA69 505 aa14.22□□□□□ -0.13
SHKBP1-224ENST00000600718 TSNAXQ99598 290 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-224ENST00000600718 STRAPQ9Y3F4 350 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-224ENST00000600718 A0A096LNT2 108 aa14.21□□□□□ -0.13
SHKBP1-224ENST00000600718 SPINK9Q5DT21 86 aa14.21□□□□□ -0.13
SHKBP1-224ENST00000600718 PRSS57Q6UWY2 283 aa14.21□□□□□ -0.13
SHKBP1-224ENST00000600718 TMEM14EPQ6UXP3 125 aa14.21□□□□□ -0.13
SHKBP1-224ENST00000600718 LURAP1LQ8IV03 231 aa14.21□□□□□ -0.13
SHKBP1-224ENST00000600718 UBAC2Q8NBM4 344 aa14.21□□□□□ -0.13
SHKBP1-224ENST00000600718 MALSU1Q96EH3 234 aa14.21□□□□□ -0.13
SHKBP1-224ENST00000600718 NARS2Q96I59 477 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-224ENST00000600718 RITA1Q96K30 269 aa14.21□□□□□ -0.13
SHKBP1-224ENST00000600718 HIPK2Q9H2X6 1198 aa14.21□□□□□ -0.13
SHKBP1-224ENST00000600718 WFDC1Q9HC57 220 aa14.21□□□□□ -0.13
SHKBP1-224ENST00000600718 VDAC2P45880 294 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 DYNLT3P51808 116 aa14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 RPP30P78346 268 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 LOXL1Q08397 574 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 TMEM267Q0VDI3 215 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 SSX2Q16385 188 aa14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 OR1S2Q8NGQ3 325 aa14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 OR5B3Q8NH48 314 aa14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 CFHR4Q92496 578 aa14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 TRAV20A0A0B4J274 112 aa14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 TEX50A0A1B0GTY4 177 aa14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 NUDT19A8MXV4 375 aa14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 VENTXO95231 258 aa14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 METTL15P1P0C7V9 234 aa14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 RPL8P62917 257 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 TMEM217Q8N7C4 229 aa14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 OR5C1Q8NGR4 320 aa14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 C12orf57Q99622 126 aa14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 ENY2Q9NPA8 101 aa14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 HEYLQ9NQ87 328 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 BIN3Q9NQY0 253 aa14.2□□□□□ -0.14
SHKBP1-224ENST00000600718 CENPVL3A0A0U1RRI6 287 aa14.19□□□□□ -0.14
SHKBP1-224ENST00000600718 SLC25A17O43808 307 aa14.19□□□□□ -0.14
SHKBP1-224ENST00000600718 GATA3P23771 443 aa14.19□□□□□ -0.14
SHKBP1-224ENST00000600718 HBG1P69891 147 aa14.19□□□□□ -0.14
SHKBP1-224ENST00000600718 HBG2P69892 147 aa14.19□□□□□ -0.14
SHKBP1-224ENST00000600718 Q5PR19 223 aa14.19□□□□□ -0.14
SHKBP1-224ENST00000600718 C10orf91Q5T1B1 145 aa14.19□□□□□ -0.14
SHKBP1-224ENST00000600718 LINC01356Q8N9X3 169 aa14.19□□□□□ -0.14
SHKBP1-224ENST00000600718 OR4C12Q96R67 309 aa14.19□□□□□ -0.14
SHKBP1-224ENST00000600718 ARV1Q9H2C2 271 aa14.19□□□□□ -0.14
SHKBP1-224ENST00000600718 NPFFO15130 113 aa14.18□□□□□ -0.14
SHKBP1-224ENST00000600718 SCAF4O95104 1147 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-224ENST00000600718 CRYGBP07316 175 aa14.18□□□□□ -0.14
SHKBP1-224ENST00000600718 PRCDQ00LT1 54 aa14.18□□□□□ -0.14
SHKBP1-224ENST00000600718 ZNF266Q14584 549 aa14.18□□□□□ -0.14
SHKBP1-224ENST00000600718 CLINT1Q14677 625 aa14.18□□□□□ -0.14
SHKBP1-224ENST00000600718 PSG5Q15238 335 aa14.18□□□□□ -0.14
SHKBP1-224ENST00000600718 EIF5AL1Q6IS14 154 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-224ENST00000600718 COMMD5Q9GZQ3 224 aa14.18□□□□□ -0.14
SHKBP1-224ENST00000600718 CARHSP1Q9Y2V2 147 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-224ENST00000600718 USP9YO00507 2555 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-224ENST00000600718 F8W036 122 aa14.18□□□□□ -0.14
SHKBP1-224ENST00000600718 FGF16O43320 207 aa14.18□□□□□ -0.14
SHKBP1-224ENST00000600718 DFFBO76075 338 aa14.18□□□□□ -0.14
SHKBP1-224ENST00000600718 RPL35P42766 123 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-224ENST00000600718 AKR1D1P51857 326 aa14.18□□□□□ -0.14
SHKBP1-224ENST00000600718 DYNAPQ8N1N2 210 aa14.18□□□□□ -0.14
SHKBP1-224ENST00000600718 OR1L8Q8NGR8 309 aa14.18□□□□□ -0.14
SHKBP1-224ENST00000600718 MOSP00540 346 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 188.2 ms