RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 IFNA17P01571 189 aa9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 CRHBPP24387 322 aa9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 PTBP1P26599 531 aaKnown RBP eCLIP9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 MAPK3P27361 379 aaPredicted RBP9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 TNP2Q05952 138 aa9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 INSL4Q14641 139 aa9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 IRF3Q14653 427 aa9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 C12orf74Q32Q52 190 aa9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 C1orf146Q5VVC0 180 aa9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 KCTD9Q7L273 389 aa9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 LRRTM1Q86UE6 522 aa9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 PUSL1Q8N0Z8 303 aaKnown RBP9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 GBGT1Q8N5D6 347 aa9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 FAM89BQ8N5H3 189 aa9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 ZNF485Q8NCK3 441 aa9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 GINS4Q9BRT9 223 aa9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 SMPXQ9UHP9 88 aa9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 DIMT1Q9UNQ2 313 aaKnown RBP9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 MRPS7Q9Y2R9 242 aaKnown RBP9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 PRELID3BQ9Y3B1 194 aa9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 NACAE9PAV3 2078 aa9.06□□□□□ -0.96
CSNK1D-218ENST00000581655 J3QRK9 145 aa9.05□□□□□ -0.96
CSNK1D-218ENST00000581655 WBP4O75554 376 aaKnown RBP9.05□□□□□ -0.96
CSNK1D-218ENST00000581655 BPNT1O95861 308 aa9.05□□□□□ -0.96
CSNK1D-218ENST00000581655 CD74P04233 296 aa9.05□□□□□ -0.96
CSNK1D-218ENST00000581655 CELP19835 753 aa9.05□□□□□ -0.96
CSNK1D-218ENST00000581655 RPL30P62888 115 aaKnown RBP9.05□□□□□ -0.96
CSNK1D-218ENST00000581655 LEMD1Q68G75 181 aa9.05□□□□□ -0.96
CSNK1D-218ENST00000581655 THYN1Q9P016 225 aa9.05□□□□□ -0.96
CSNK1D-218ENST00000581655 X6R8D5 127 aa9.05□□□□□ -0.96
CSNK1D-218ENST00000581655 IGHV3-49A0A0A0MS15 119 aa9.04□□□□□ -0.96
CSNK1D-218ENST00000581655 LOC100130705A0A1B0GUX0 176 aa9.04□□□□□ -0.96
CSNK1D-218ENST00000581655 FCGR3AP08637 254 aa9.04□□□□□ -0.96
CSNK1D-218ENST00000581655 GIG44P09565 113 aaPredicted RBP9.04□□□□□ -0.96
CSNK1D-218ENST00000581655 TAS2R43P59537 309 aa9.04□□□□□ -0.96
CSNK1D-218ENST00000581655 RPL8P62917 257 aaKnown RBP9.04□□□□□ -0.96
CSNK1D-218ENST00000581655 PLAC9Q5JTB6 97 aa9.04□□□□□ -0.96
CSNK1D-218ENST00000581655 RBM48Q5RL73 367 aaKnown RBP9.04□□□□□ -0.96
CSNK1D-218ENST00000581655 CBR4Q8N4T8 237 aa9.04□□□□□ -0.96
CSNK1D-218ENST00000581655 VN1R17PQ8TDU5 208 aa9.04□□□□□ -0.96
CSNK1D-218ENST00000581655 MAFIPQ8WZ33 124 aa9.04□□□□□ -0.96
CSNK1D-218ENST00000581655 BSCL2Q96G97 398 aaPredicted RBP9.04□□□□□ -0.96
CSNK1D-218ENST00000581655 RHPN1-AS1Q9BWJ2 59 aa9.04□□□□□ -0.96
CSNK1D-218ENST00000581655 IGHV7-4-1A0A0J9YVY3 117 aa9.03□□□□□ -0.96
CSNK1D-218ENST00000581655 IGLC7A0M8Q6 106 aa9.03□□□□□ -0.96
CSNK1D-218ENST00000581655 IRGMA1A4Y4 181 aa9.03□□□□□ -0.96
CSNK1D-218ENST00000581655 C15orf62A8K5M9 175 aa9.03□□□□□ -0.96
CSNK1D-218ENST00000581655 ZNF705EA8MWA4 302 aaPredicted RBP9.03□□□□□ -0.96
CSNK1D-218ENST00000581655 CHEK1O14757 476 aa9.03□□□□□ -0.96
CSNK1D-218ENST00000581655 DIRAS3O95661 229 aa9.03□□□□□ -0.96
CSNK1D-218ENST00000581655 DEFB131AP59861 70 aa9.03□□□□□ -0.96
CSNK1D-218ENST00000581655 MRPS15P82914 257 aaKnown RBP9.03□□□□□ -0.96
CSNK1D-218ENST00000581655 P2RY14Q15391 338 aa9.03□□□□□ -0.96
CSNK1D-218ENST00000581655 SPSB3Q6PJ21 355 aa9.03□□□□□ -0.96
CSNK1D-218ENST00000581655 H1FOOQ8IZA3 346 aaPredicted RBP9.03□□□□□ -0.96
CSNK1D-218ENST00000581655 OR4S2Q8NH73 311 aa9.03□□□□□ -0.96
CSNK1D-218ENST00000581655 IGHV3-21A0A0B4J1V1 117 aa9.02□□□□□ -0.97
CSNK1D-218ENST00000581655 CD1AP06126 327 aa9.02□□□□□ -0.97
CSNK1D-218ENST00000581655 HLA-GP17693 338 aa9.02□□□□□ -0.97
CSNK1D-218ENST00000581655 OR2B8PP59922 312 aa9.02□□□□□ -0.97
CSNK1D-218ENST00000581655 ACSM3Q53FZ2 586 aa9.02□□□□□ -0.97
CSNK1D-218ENST00000581655 LIPKQ5VXJ0 399 aa9.02□□□□□ -0.97
CSNK1D-218ENST00000581655 FAM90A2PQ658T7 463 aa9.02□□□□□ -0.97
CSNK1D-218ENST00000581655 STHQ8IWL8 128 aa9.02□□□□□ -0.97
CSNK1D-218ENST00000581655 TMEM116Q8NCL8 245 aa9.02□□□□□ -0.97
CSNK1D-218ENST00000581655 PHYHIPQ92561 330 aa9.02□□□□□ -0.97
CSNK1D-218ENST00000581655 TMEM80Q96HE8 168 aa9.02□□□□□ -0.97
CSNK1D-218ENST00000581655 CMTM3Q96MX0 182 aa9.02□□□□□ -0.97
CSNK1D-218ENST00000581655 KCNK7Q9Y2U2 307 aa9.02□□□□□ -0.97
CSNK1D-218ENST00000581655 RBMX2Q9Y388 322 aaKnown RBP9.02□□□□□ -0.97
CSNK1D-218ENST00000581655 IGHV3OR16-13A0A075B7E8 117 aa9.01□□□□□ -0.97
CSNK1D-218ENST00000581655 IGHV3-74A0A0B4J1X5 117 aa9.01□□□□□ -0.97
CSNK1D-218ENST00000581655 CDK1P06493 297 aa9.01□□□□□ -0.97
CSNK1D-218ENST00000581655 CD36P16671 472 aa9.01□□□□□ -0.97
CSNK1D-218ENST00000581655 C4BPBP20851 252 aa9.01□□□□□ -0.97
CSNK1D-218ENST00000581655 PAFAH1B2P68402 229 aa9.01□□□□□ -0.97
CSNK1D-218ENST00000581655 TMEM41BQ5BJD5 291 aa9.01□□□□□ -0.97
CSNK1D-218ENST00000581655 UBAC2Q8NBM4 344 aa9.01□□□□□ -0.97
CSNK1D-218ENST00000581655 OR56B1Q8NGI3 324 aa9.01□□□□□ -0.97
CSNK1D-218ENST00000581655 TCTEX1D2Q8WW35 142 aa9.01□□□□□ -0.97
CSNK1D-218ENST00000581655 GIMAP1Q8WWP7 306 aa9.01□□□□□ -0.97
CSNK1D-218ENST00000581655 PYDC1Q8WXC3 89 aa9.01□□□□□ -0.97
CSNK1D-218ENST00000581655 C21orf62Q9NYP8 219 aa9.01□□□□□ -0.97
CSNK1D-218ENST00000581655 TBC1D24Q9ULP9 559 aa9.01□□□□□ -0.97
CSNK1D-218ENST00000581655 F8W735 103 aaPredicted RBP9□□□□□ -0.97
CSNK1D-218ENST00000581655 DFFBO76075 338 aa9□□□□□ -0.97
CSNK1D-218ENST00000581655 HRASP01112 189 aa9□□□□□ -0.97
CSNK1D-218ENST00000581655 CD37P11049 281 aa9□□□□□ -0.97
CSNK1D-218ENST00000581655 NPY1RP25929 384 aa9□□□□□ -0.97
CSNK1D-218ENST00000581655 BRWD1-AS2P59051 145 aa9□□□□□ -0.97
CSNK1D-218ENST00000581655 PLA2G7Q13093 441 aa9□□□□□ -0.97
CSNK1D-218ENST00000581655 SLC25A24Q6NUK1 477 aa9□□□□□ -0.97
CSNK1D-218ENST00000581655 TCF24Q7RTU0 167 aa9□□□□□ -0.97
CSNK1D-218ENST00000581655 FAM24BQ8N5W8 94 aa9□□□□□ -0.97
CSNK1D-218ENST00000581655 ZNF414Q96IQ9 312 aa9□□□□□ -0.97
CSNK1D-218ENST00000581655 PLGRKTQ9HBL7 147 aa9□□□□□ -0.97
CSNK1D-218ENST00000581655 CLEC5AQ9NY25 188 aa9□□□□□ -0.97
CSNK1D-218ENST00000581655 SMPD3Q9NY59 655 aaPredicted RBP9□□□□□ -0.97
CSNK1D-218ENST00000581655 SPATA2Q9UM82 520 aa9□□□□□ -0.97
CSNK1D-218ENST00000581655 SRRM2Q9UQ35 2752 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms