RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 OR10G4Q8NGN3 311 aa14.77□□□□□ -0.04
SMPD3-211ENST00000568373 OR10G9Q8NGN4 311 aa14.77□□□□□ -0.04
SMPD3-211ENST00000568373 OR10G7Q8NGN6 311 aa14.77□□□□□ -0.04
SMPD3-211ENST00000568373 TMEM186Q96B77 213 aa14.77□□□□□ -0.04
SMPD3-211ENST00000568373 C20orf24Q9BUV8 137 aa14.77□□□□□ -0.04
SMPD3-211ENST00000568373 BET1LQ9NYM9 111 aa14.77□□□□□ -0.04
SMPD3-211ENST00000568373 RALYQ9UKM9 306 aaKnown RBP14.77□□□□□ -0.04
SMPD3-211ENST00000568373 ZFYVE26Q68DK2 2539 aa14.77□□□□□ -0.05
SMPD3-211ENST00000568373 H7C2Y5 167 aa14.77□□□□□ -0.05
SMPD3-211ENST00000568373 MPDU1O75352 247 aa14.77□□□□□ -0.05
SMPD3-211ENST00000568373 IGHV2-70P01814 119 aa14.77□□□□□ -0.05
SMPD3-211ENST00000568373 IFNA4P05014 189 aa14.77□□□□□ -0.05
SMPD3-211ENST00000568373 FBP1P09467 338 aa14.77□□□□□ -0.05
SMPD3-211ENST00000568373 SAA1P0DJI8 122 aaPredicted RBP14.77□□□□□ -0.05
SMPD3-211ENST00000568373 AKR1C3P42330 323 aa14.77□□□□□ -0.05
SMPD3-211ENST00000568373 REG1BP48304 166 aa14.77□□□□□ -0.05
SMPD3-211ENST00000568373 DLK1P80370 383 aa14.77□□□□□ -0.05
SMPD3-211ENST00000568373 OR9G1Q8NH87 305 aa14.77□□□□□ -0.05
SMPD3-211ENST00000568373 LHX4Q969G2 390 aa14.77□□□□□ -0.05
SMPD3-211ENST00000568373 ST6GALNAC6Q969X2 333 aa14.77□□□□□ -0.05
SMPD3-211ENST00000568373 CTXND1A0A1B0GTU2 59 aa14.76□□□□□ -0.05
SMPD3-211ENST00000568373 MYOD1P15172 320 aa14.76□□□□□ -0.05
SMPD3-211ENST00000568373 NPY1RP25929 384 aa14.76□□□□□ -0.05
SMPD3-211ENST00000568373 ZNF137PP52743 207 aa14.76□□□□□ -0.05
SMPD3-211ENST00000568373 PMS2P11Q13670 270 aa14.76□□□□□ -0.05
SMPD3-211ENST00000568373 RHEBQ15382 184 aa14.76□□□□□ -0.05
SMPD3-211ENST00000568373 C11orf42Q8N5U0 333 aa14.76□□□□□ -0.05
SMPD3-211ENST00000568373 HARBI1Q96MB7 349 aa14.76□□□□□ -0.05
SMPD3-211ENST00000568373 SLC25A22Q9H936 323 aa14.76□□□□□ -0.05
SMPD3-211ENST00000568373 HIVEP3Q5T1R4 2406 aa14.76□□□□□ -0.05
SMPD3-211ENST00000568373 MALRD1Q5VYJ5 2156 aa14.75□□□□□ -0.05
SMPD3-211ENST00000568373 SMCO3A2RU48 225 aa14.75□□□□□ -0.05
SMPD3-211ENST00000568373 KBTBD11O94819 623 aa14.75□□□□□ -0.05
SMPD3-211ENST00000568373 CEBPGP53567 150 aa14.75□□□□□ -0.05
SMPD3-211ENST00000568373 PRCDQ00LT1 54 aa14.75□□□□□ -0.05
SMPD3-211ENST00000568373 TMEM177Q53S58 311 aa14.75□□□□□ -0.05
SMPD3-211ENST00000568373 TREML4Q6UXN2 200 aa14.75□□□□□ -0.05
SMPD3-211ENST00000568373 ZNF841Q6ZN19 808 aa14.75□□□□□ -0.05
SMPD3-211ENST00000568373 NABP2Q9BQ15 211 aa14.75□□□□□ -0.05
SMPD3-211ENST00000568373 PUS1Q9Y606 427 aaKnown RBP eCLIP14.75□□□□□ -0.05
SMPD3-211ENST00000568373 EIF3GO75821 320 aaKnown RBP eCLIP14.75□□□□□ -0.05
SMPD3-211ENST00000568373 DIAPH2-AS1Q14236 149 aa14.75□□□□□ -0.05
SMPD3-211ENST00000568373 HINT2Q9BX68 163 aa14.75□□□□□ -0.05
SMPD3-211ENST00000568373 ACTR3CQ9C0K3 210 aaPredicted RBP14.75□□□□□ -0.05
SMPD3-211ENST00000568373 PLEKHA3Q9HB20 300 aa14.75□□□□□ -0.05
SMPD3-211ENST00000568373 FKBP11Q9NYL4 201 aa14.75□□□□□ -0.05
SMPD3-211ENST00000568373 SPTBN1Q01082 2364 aaKnown RBP14.74□□□□□ -0.05
SMPD3-211ENST00000568373 SOX15O60248 233 aa14.74□□□□□ -0.05
SMPD3-211ENST00000568373 IFNA1P01562 189 aa14.74□□□□□ -0.05
SMPD3-211ENST00000568373 PAX6P26367 422 aa14.74□□□□□ -0.05
SMPD3-211ENST00000568373 PDPNQ86YL7 162 aa14.74□□□□□ -0.05
SMPD3-211ENST00000568373 FLYWCH2Q96CP2 140 aaKnown RBP14.74□□□□□ -0.05
SMPD3-211ENST00000568373 RAB1BQ9H0U4 201 aa14.74□□□□□ -0.05
SMPD3-211ENST00000568373 TMEM133Q9H2Q1 129 aa14.74□□□□□ -0.05
SMPD3-211ENST00000568373 H3BQ15 152 aa14.73□□□□□ -0.05
SMPD3-211ENST00000568373 CA2P00918 260 aa14.73□□□□□ -0.05
SMPD3-211ENST00000568373 ACOT6Q3I5F7 207 aaPredicted RBP14.73□□□□□ -0.05
SMPD3-211ENST00000568373 FAM122CQ6P4D5 195 aa14.73□□□□□ -0.05
SMPD3-211ENST00000568373 OR4C13Q8NGP0 309 aa14.73□□□□□ -0.05
SMPD3-211ENST00000568373 OR5B3Q8NH48 314 aa14.73□□□□□ -0.05
SMPD3-211ENST00000568373 CBLN4Q9NTU7 201 aa14.73□□□□□ -0.05
SMPD3-211ENST00000568373 VAX2Q9UIW0 290 aa14.73□□□□□ -0.05
SMPD3-211ENST00000568373 TEX50A0A1B0GTY4 177 aa14.73□□□□□ -0.05
SMPD3-211ENST00000568373 HRNRQ86YZ3 2850 aaPredicted RBP14.73□□□□□ -0.05
SMPD3-211ENST00000568373 PCGF1Q9BSM1 259 aa14.73□□□□□ -0.05
SMPD3-211ENST00000568373 PRELID1Q9Y255 219 aa14.73□□□□□ -0.05
SMPD3-211ENST00000568373 DCHS2Q6V1P9 2916 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 HMGB3O15347 200 aaKnown RBP14.72□□□□□ -0.05
SMPD3-211ENST00000568373 CYB5BO43169 146 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 OPRK1P41145 380 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 AVPI1Q5T686 147 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 RBMS3Q6XE24 437 aaKnown RBP14.72□□□□□ -0.05
SMPD3-211ENST00000568373 TGIF2LXQ8IUE1 241 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 RAB24Q969Q5 203 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 P2RX4Q99571 388 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 MGST2Q99735 147 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 TUBA4BQ9H853 241 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 WASHC3Q9Y3C0 194 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 CFAP46Q8IYW2 2715 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 COLCA2A8K830 154 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 OPN1MWP04001 364 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 OPN1MW2P0DN77 364 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 OPN1MW3P0DN78 364 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 RAB13P51153 203 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 ARSJQ5FYB0 599 aaPredicted RBP14.72□□□□□ -0.05
SMPD3-211ENST00000568373 C11orf71Q6IPW1 123 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 C15orf54Q8N8G6 183 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 TNFRSF14Q92956 283 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 NIPSNAP3BQ9BS92 247 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 NPVFQ9HCQ7 196 aa14.72□□□□□ -0.05
SMPD3-211ENST00000568373 LSM4Q9Y4Z0 139 aaKnown RBP14.72□□□□□ -0.05
SMPD3-211ENST00000568373 IL3RAP26951 378 aa14.71□□□□□ -0.05
SMPD3-211ENST00000568373 GGTLC1Q9BX51 225 aa14.71□□□□□ -0.05
SMPD3-211ENST00000568373 A0A1W2PPH5 198 aa14.7□□□□□ -0.06
SMPD3-211ENST00000568373 SEC14L6B5MCN3 397 aa14.7□□□□□ -0.06
SMPD3-211ENST00000568373 USF1P22415 310 aaPredicted RBP14.7□□□□□ -0.06
SMPD3-211ENST00000568373 CDC34P49427 236 aaPredicted RBP14.7□□□□□ -0.06
SMPD3-211ENST00000568373 RPL8P62917 257 aaKnown RBP14.7□□□□□ -0.06
SMPD3-211ENST00000568373 FAM90A2PQ658T7 463 aa14.7□□□□□ -0.06
SMPD3-211ENST00000568373 VSTM2AQ8TAG5 236 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms