RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 MARCH11A6NNE9 402 aa12.81□□□□□ -0.36
USB1-211ENST00000565662 A8MZ25 164 aa12.81□□□□□ -0.36
USB1-211ENST00000565662 APELAP0DMC3 54 aa12.81□□□□□ -0.36
USB1-211ENST00000565662 CTRB1P17538 263 aa12.81□□□□□ -0.36
USB1-211ENST00000565662 GNRHRP30968 328 aa12.81□□□□□ -0.36
USB1-211ENST00000565662 HRH1P35367 487 aa12.81□□□□□ -0.36
USB1-211ENST00000565662 TGFBR1P36897 503 aa12.81□□□□□ -0.36
USB1-211ENST00000565662 UCP3P55916 312 aa12.81□□□□□ -0.36
USB1-211ENST00000565662 SYNJ2BPP57105 145 aa12.81□□□□□ -0.36
USB1-211ENST00000565662 MRPS10P82664 201 aaKnown RBP12.81□□□□□ -0.36
USB1-211ENST00000565662 CTRB2Q6GPI1 263 aa12.81□□□□□ -0.36
USB1-211ENST00000565662 SLC38A6Q8IZM9 456 aa12.81□□□□□ -0.36
USB1-211ENST00000565662 DGCR14Q96DF8 476 aaKnown RBP12.81□□□□□ -0.36
USB1-211ENST00000565662 ZNF486Q96H40 463 aaPredicted RBP12.81□□□□□ -0.36
USB1-211ENST00000565662 QTRT1Q9BXR0 403 aaKnown RBP12.81□□□□□ -0.36
USB1-211ENST00000565662 ZMAT4Q9H898 229 aa12.81□□□□□ -0.36
USB1-211ENST00000565662 TMEM140Q9NV12 185 aa12.81□□□□□ -0.36
USB1-211ENST00000565662 FAM25AB3EWG3 89 aa12.8□□□□□ -0.36
USB1-211ENST00000565662 FAM25CB3EWG5 89 aa12.8□□□□□ -0.36
USB1-211ENST00000565662 FAM25GB3EWG6 89 aa12.8□□□□□ -0.36
USB1-211ENST00000565662 LGALS9O00182 355 aa12.8□□□□□ -0.36
USB1-211ENST00000565662 UPK2O00526 184 aa12.8□□□□□ -0.36
USB1-211ENST00000565662 SNAPC5O75971 98 aa12.8□□□□□ -0.36
USB1-211ENST00000565662 ATG12O94817 140 aa12.8□□□□□ -0.36
USB1-211ENST00000565662 RLN1P04808 185 aa12.8□□□□□ -0.36
USB1-211ENST00000565662 EIF4EP06730 217 aaKnown RBP12.8□□□□□ -0.36
USB1-211ENST00000565662 RFX2P48378 723 aa12.8□□□□□ -0.36
USB1-211ENST00000565662 BRWD1-AS2P59051 145 aa12.8□□□□□ -0.36
USB1-211ENST00000565662 SSBP1Q04837 148 aaKnown RBP12.8□□□□□ -0.36
USB1-211ENST00000565662 C10orf55Q5SWW7 151 aa12.8□□□□□ -0.36
USB1-211ENST00000565662 GPR141Q7Z602 305 aa12.8□□□□□ -0.36
USB1-211ENST00000565662 ARRDC1Q8N5I2 433 aa12.8□□□□□ -0.36
USB1-211ENST00000565662 FBXL7Q9UJT9 491 aa12.8□□□□□ -0.36
USB1-211ENST00000565662 PRNDQ9UKY0 176 aa12.8□□□□□ -0.36
USB1-211ENST00000565662 PGLYRP1O75594 196 aaPredicted RBP12.79□□□□□ -0.36
USB1-211ENST00000565662 OR2J3O76001 311 aa12.79□□□□□ -0.36
USB1-211ENST00000565662 PMP2P02689 132 aa12.79□□□□□ -0.36
USB1-211ENST00000565662 IFNA6P05013 189 aa12.79□□□□□ -0.36
USB1-211ENST00000565662 IL6RP08887 468 aaPredicted RBP12.79□□□□□ -0.36
USB1-211ENST00000565662 PTHLHP12272 177 aa12.79□□□□□ -0.36
USB1-211ENST00000565662 RPA2P15927 270 aa12.79□□□□□ -0.36
USB1-211ENST00000565662 ZNF45Q02386 682 aa12.79□□□□□ -0.36
USB1-211ENST00000565662 FAM106AQ4KMX7 169 aa12.79□□□□□ -0.36
USB1-211ENST00000565662 GPR107Q5VW38 600 aa12.79□□□□□ -0.36
USB1-211ENST00000565662 OR1L8Q8NGR8 309 aa12.79□□□□□ -0.36
USB1-211ENST00000565662 OR5B3Q8NH48 314 aa12.79□□□□□ -0.36
USB1-211ENST00000565662 TMEM56Q96MV1 263 aa12.79□□□□□ -0.36
USB1-211ENST00000565662 TECRQ9NZ01 308 aaKnown RBP12.79□□□□□ -0.36
USB1-211ENST00000565662 HMX3A6NHT5 357 aa12.78□□□□□ -0.36
USB1-211ENST00000565662 BMPR1BO00238 502 aa12.78□□□□□ -0.36
USB1-211ENST00000565662 B3GALNT1O75752 331 aa12.78□□□□□ -0.36
USB1-211ENST00000565662 S1PR2O95136 353 aa12.78□□□□□ -0.36
USB1-211ENST00000565662 PTBP1P26599 531 aaKnown RBP eCLIP12.78□□□□□ -0.36
USB1-211ENST00000565662 HLA-DMAP28067 261 aa12.78□□□□□ -0.36
USB1-211ENST00000565662 OR2B8PP59922 312 aa12.78□□□□□ -0.36
USB1-211ENST00000565662 RNASE10Q5GAN6 216 aaKnown RBP12.78□□□□□ -0.36
USB1-211ENST00000565662 GPHB5Q86YW7 130 aa12.78□□□□□ -0.36
USB1-211ENST00000565662 SNX29P2Q8IUI4 249 aa12.78□□□□□ -0.36
USB1-211ENST00000565662 DYNLRB2Q8TF09 96 aa12.78□□□□□ -0.36
USB1-211ENST00000565662 LSM10Q969L4 123 aaKnown RBP12.78□□□□□ -0.36
USB1-211ENST00000565662 FXYD6Q9H0Q3 95 aa12.78□□□□□ -0.36
USB1-211ENST00000565662 PALMDQ9NP74 551 aa12.78□□□□□ -0.36
USB1-211ENST00000565662 GAR1Q9NY12 217 aaKnown RBP12.78□□□□□ -0.36
USB1-211ENST00000565662 IGLV11-55A0A075B6I3 123 aa12.77□□□□□ -0.37
USB1-211ENST00000565662 HPGDSO60760 199 aa12.77□□□□□ -0.37
USB1-211ENST00000565662 NOL3O60936 208 aaKnown RBP12.77□□□□□ -0.37
USB1-211ENST00000565662 TRAPPC2P0DI81 140 aa12.77□□□□□ -0.37
USB1-211ENST00000565662 TRAPPC2BP0DI82 140 aa12.77□□□□□ -0.37
USB1-211ENST00000565662 ELK1P19419 428 aa12.77□□□□□ -0.37
USB1-211ENST00000565662 ARL3P36405 182 aa12.77□□□□□ -0.37
USB1-211ENST00000565662 CTF1Q16619 201 aa12.77□□□□□ -0.37
USB1-211ENST00000565662 C11orf87Q6NUJ2 197 aa12.77□□□□□ -0.37
USB1-211ENST00000565662 GDPD1Q8N9F7 314 aa12.77□□□□□ -0.37
USB1-211ENST00000565662 VN1R17PQ8TDU5 208 aa12.77□□□□□ -0.37
USB1-211ENST00000565662 RAB2BQ8WUD1 216 aa12.77□□□□□ -0.37
USB1-211ENST00000565662 MARC2Q969Z3 335 aa12.77□□□□□ -0.37
USB1-211ENST00000565662 A8MWP6 167 aa12.76□□□□□ -0.37
USB1-211ENST00000565662 FCER2P06734 321 aa12.76□□□□□ -0.37
USB1-211ENST00000565662 CSN3P07498 182 aa12.76□□□□□ -0.37
USB1-211ENST00000565662 SMIM18P0DKX4 95 aa12.76□□□□□ -0.37
USB1-211ENST00000565662 FANCD2OSQ96PS1 177 aa12.76□□□□□ -0.37
USB1-211ENST00000565662 SLC2A8Q9NY64 477 aa12.76□□□□□ -0.37
USB1-211ENST00000565662 IGLC7A0M8Q6 106 aa12.75□□□□□ -0.37
USB1-211ENST00000565662 PRH1P02810 166 aa12.75□□□□□ -0.37
USB1-211ENST00000565662 AREGP15514 252 aa12.75□□□□□ -0.37
USB1-211ENST00000565662 RND3P61587 244 aa12.75□□□□□ -0.37
USB1-211ENST00000565662 SPSB3Q6PJ21 355 aa12.75□□□□□ -0.37
USB1-211ENST00000565662 LYSMD2Q8IV50 215 aa12.75□□□□□ -0.37
USB1-211ENST00000565662 CCDC71LQ8N9Z2 235 aa12.75□□□□□ -0.37
USB1-211ENST00000565662 FCAMRQ8WWV6 532 aa12.75□□□□□ -0.37
USB1-211ENST00000565662 GPHA2Q96T91 129 aa12.75□□□□□ -0.37
USB1-211ENST00000565662 EXTL2Q9UBQ6 330 aa12.75□□□□□ -0.37
USB1-211ENST00000565662 TRBV12-3P01733 135 aa12.74□□□□□ -0.37
USB1-211ENST00000565662 SERPINE2P07093 398 aa12.74□□□□□ -0.37
USB1-211ENST00000565662 FRMD6-AS1P0C7T7 363 aa12.74□□□□□ -0.37
USB1-211ENST00000565662 MYOD1P15172 320 aa12.74□□□□□ -0.37
USB1-211ENST00000565662 LPAR6P43657 344 aa12.74□□□□□ -0.37
USB1-211ENST00000565662 ELLP55199 621 aaPredicted RBP12.74□□□□□ -0.37
USB1-211ENST00000565662 TAS2R19P59542 299 aa12.74□□□□□ -0.37
USB1-211ENST00000565662 DEFA5Q01523 94 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms