RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 ANKRD55Q3KP44 614 aa13.03□□□□□ -0.32
CRTC3-208ENST00000560098 UBE2UQ5VVX9 321 aa13.03□□□□□ -0.32
CRTC3-208ENST00000560098 TPRA1Q86W33 373 aa13.03□□□□□ -0.32
CRTC3-208ENST00000560098 LGALS14Q8TCE9 139 aa13.03□□□□□ -0.32
CRTC3-208ENST00000560098 CXorf58Q96LI9 332 aa13.03□□□□□ -0.32
CRTC3-208ENST00000560098 GGTLC1Q9BX51 225 aa13.03□□□□□ -0.32
CRTC3-208ENST00000560098 CCL28Q9NRJ3 127 aa13.03□□□□□ -0.32
CRTC3-208ENST00000560098 MRPS14O60783 128 aaKnown RBP13.02□□□□□ -0.33
CRTC3-208ENST00000560098 FCGR2CP31995 323 aa13.02□□□□□ -0.33
CRTC3-208ENST00000560098 ARPC4P59998 168 aa13.02□□□□□ -0.33
CRTC3-208ENST00000560098 TIMM50Q3ZCQ8 353 aa13.02□□□□□ -0.33
CRTC3-208ENST00000560098 SFXN4Q6P4A7 337 aa13.02□□□□□ -0.33
CRTC3-208ENST00000560098 BTNL8Q6UX41 500 aa13.02□□□□□ -0.33
CRTC3-208ENST00000560098 SPAG16Q8N0X2 631 aa13.02□□□□□ -0.33
CRTC3-208ENST00000560098 BEST4Q8NFU0 473 aa13.02□□□□□ -0.33
CRTC3-208ENST00000560098 OR13F1Q8NGS4 319 aa13.02□□□□□ -0.33
CRTC3-208ENST00000560098 SECTM1Q8WVN6 248 aa13.02□□□□□ -0.33
CRTC3-208ENST00000560098 HRASLSQ9HDD0 168 aa13.02□□□□□ -0.33
CRTC3-208ENST00000560098 RHBDL2Q9NX52 303 aa13.02□□□□□ -0.33
CRTC3-208ENST00000560098 RRP15Q9Y3B9 282 aaKnown RBP13.02□□□□□ -0.33
CRTC3-208ENST00000560098 LOC102724200A0A096LPH7 203 aaPredicted RBP13.01□□□□□ -0.33
CRTC3-208ENST00000560098 PSMB9P28065 219 aa13.01□□□□□ -0.33
CRTC3-208ENST00000560098 OR2B8PP59922 312 aa13.01□□□□□ -0.33
CRTC3-208ENST00000560098 TM4SF20Q53R12 229 aa13.01□□□□□ -0.33
CRTC3-208ENST00000560098 UNQ9165/PRO28630Q6UXU0 137 aa13.01□□□□□ -0.33
CRTC3-208ENST00000560098 ZBTB34Q8NCN2 500 aa13.01□□□□□ -0.33
CRTC3-208ENST00000560098 MARC2Q969Z3 335 aa13.01□□□□□ -0.33
CRTC3-208ENST00000560098 OVOL2Q9BRP0 275 aa13.01□□□□□ -0.33
CRTC3-208ENST00000560098 TRAV25A0A0B4J276 109 aa13□□□□□ -0.33
CRTC3-208ENST00000560098 RBFOX2O43251 390 aaKnown RBP eCLIP13□□□□□ -0.33
CRTC3-208ENST00000560098 PPYP01298 95 aa13□□□□□ -0.33
CRTC3-208ENST00000560098 C8orf88P0DMB2 117 aa13□□□□□ -0.33
CRTC3-208ENST00000560098 PTHLHP12272 177 aa13□□□□□ -0.33
CRTC3-208ENST00000560098 GPR183P32249 361 aa13□□□□□ -0.33
CRTC3-208ENST00000560098 TAS2R31P59538 309 aa13□□□□□ -0.33
CRTC3-208ENST00000560098 SPARTQ8N0X7 666 aa13□□□□□ -0.33
CRTC3-208ENST00000560098 GVQW1Q8N7I0 195 aa13□□□□□ -0.33
CRTC3-208ENST00000560098 RAB26Q9ULW5 256 aa13□□□□□ -0.33
CRTC3-208ENST00000560098 SSR3Q9UNL2 185 aa13□□□□□ -0.33
CRTC3-208ENST00000560098 IGLC7A0M8Q6 106 aa12.99□□□□□ -0.33
CRTC3-208ENST00000560098 SULT1C2O00338 296 aa12.99□□□□□ -0.33
CRTC3-208ENST00000560098 HPRT1P00492 218 aa12.99□□□□□ -0.33
CRTC3-208ENST00000560098 ZNF585BQ52M93 769 aa12.99□□□□□ -0.33
CRTC3-208ENST00000560098 RBPMS2Q6ZRY4 209 aaKnown RBP12.99□□□□□ -0.33
CRTC3-208ENST00000560098 HOGA1Q86XE5 327 aa12.99□□□□□ -0.33
CRTC3-208ENST00000560098 ZNF502Q8TBZ5 544 aa12.99□□□□□ -0.33
CRTC3-208ENST00000560098 THYN1Q9P016 225 aa12.99□□□□□ -0.33
CRTC3-208ENST00000560098 MRPL27Q9P0M9 148 aaKnown RBP12.99□□□□□ -0.33
CRTC3-208ENST00000560098 TRAV18A0A075B6X5 111 aa12.98□□□□□ -0.33
CRTC3-208ENST00000560098 TRAV3A0A0B4J244 114 aa12.98□□□□□ -0.33
CRTC3-208ENST00000560098 UPK2O00526 184 aa12.98□□□□□ -0.33
CRTC3-208ENST00000560098 NQO2P16083 231 aa12.98□□□□□ -0.33
CRTC3-208ENST00000560098 ELLP55199 621 aaPredicted RBP12.98□□□□□ -0.33
CRTC3-208ENST00000560098 SCAND1P57086 179 aa12.98□□□□□ -0.33
CRTC3-208ENST00000560098 CATR1Q13166 79 aa12.98□□□□□ -0.33
CRTC3-208ENST00000560098 POU2AF1Q16633 256 aa12.98□□□□□ -0.33
CRTC3-208ENST00000560098 PLET1Q6UQ28 207 aa12.98□□□□□ -0.33
CRTC3-208ENST00000560098 OR1L6Q8NGR2 347 aa12.98□□□□□ -0.33
CRTC3-208ENST00000560098 FCGR1BQ92637 280 aa12.98□□□□□ -0.33
CRTC3-208ENST00000560098 SRSF8Q9BRL6 282 aaKnown RBP12.98□□□□□ -0.33
CRTC3-208ENST00000560098 COMMD5Q9GZQ3 224 aa12.98□□□□□ -0.33
CRTC3-208ENST00000560098 SLC5A7Q9GZV3 580 aa12.98□□□□□ -0.33
CRTC3-208ENST00000560098 UFC1Q9Y3C8 167 aa12.98□□□□□ -0.33
CRTC3-208ENST00000560098 PTBP1P26599 531 aaKnown RBP eCLIP12.97□□□□□ -0.33
CRTC3-208ENST00000560098 SDC2P34741 201 aa12.97□□□□□ -0.33
CRTC3-208ENST00000560098 ZNF773Q6PK81 442 aa12.97□□□□□ -0.33
CRTC3-208ENST00000560098 OR5H6Q8NGV6 325 aa12.97□□□□□ -0.33
CRTC3-208ENST00000560098 SLC25A38Q96DW6 304 aa12.97□□□□□ -0.33
CRTC3-208ENST00000560098 ETV7Q9Y603 341 aa12.97□□□□□ -0.33
CRTC3-208ENST00000560098 A0A0A6YYH2 397 aa12.96□□□□□ -0.33
CRTC3-208ENST00000560098 IGHV3-35A0A0C4DH35 117 aa12.96□□□□□ -0.33
CRTC3-208ENST00000560098 A6NJ64 397 aa12.96□□□□□ -0.33
CRTC3-208ENST00000560098 FGF2P09038 288 aa12.96□□□□□ -0.33
CRTC3-208ENST00000560098 FXYD4P59646 89 aa12.96□□□□□ -0.33
CRTC3-208ENST00000560098 MXD1Q05195 221 aa12.96□□□□□ -0.33
CRTC3-208ENST00000560098 SLC38A6Q8IZM9 456 aa12.96□□□□□ -0.33
CRTC3-208ENST00000560098 OR2C3Q8N628 320 aa12.96□□□□□ -0.33
CRTC3-208ENST00000560098 QTRT1Q9BXR0 403 aaKnown RBP12.96□□□□□ -0.33
CRTC3-208ENST00000560098 ZNF436Q9C0F3 470 aaPredicted RBP12.96□□□□□ -0.33
CRTC3-208ENST00000560098 C5orf66Q9H5L9 145 aa12.96□□□□□ -0.33
CRTC3-208ENST00000560098 PLEKHA2Q9HB19 425 aa12.96□□□□□ -0.33
CRTC3-208ENST00000560098 TMEM140Q9NV12 185 aa12.96□□□□□ -0.33
CRTC3-208ENST00000560098 CYB5BO43169 146 aa12.96□□□□□ -0.34
CRTC3-208ENST00000560098 TGOLN2O43493 480 aa12.96□□□□□ -0.34
CRTC3-208ENST00000560098 FCER2P06734 321 aa12.96□□□□□ -0.34
CRTC3-208ENST00000560098 CLEC2LP0C7M8 214 aa12.96□□□□□ -0.34
CRTC3-208ENST00000560098 ZNF818PQ6ZRF7 136 aa12.96□□□□□ -0.34
CRTC3-208ENST00000560098 DMBX1Q8NFW5 382 aa12.96□□□□□ -0.34
CRTC3-208ENST00000560098 OR10W1Q8NGF6 305 aa12.96□□□□□ -0.34
CRTC3-208ENST00000560098 OR51H1Q8NH63 302 aa12.96□□□□□ -0.34
CRTC3-208ENST00000560098 CD300LFQ8TDQ1 290 aa12.96□□□□□ -0.34
CRTC3-208ENST00000560098 VN1R17PQ8TDU5 208 aa12.96□□□□□ -0.34
CRTC3-208ENST00000560098 GIMAP1Q8WWP7 306 aa12.96□□□□□ -0.34
CRTC3-208ENST00000560098 LINC00476Q8WZB0 136 aa12.96□□□□□ -0.34
CRTC3-208ENST00000560098 SPAG8Q99932 426 aaPredicted RBP12.96□□□□□ -0.34
CRTC3-208ENST00000560098 CXorf65A6NEN9 183 aa12.95□□□□□ -0.34
CRTC3-208ENST00000560098 S1PR2O95136 353 aa12.95□□□□□ -0.34
CRTC3-208ENST00000560098 APOC4P55056 127 aa12.95□□□□□ -0.34
CRTC3-208ENST00000560098 IDNKQ5T6J7 187 aa12.95□□□□□ -0.34
CRTC3-208ENST00000560098 THOC7Q6I9Y2 204 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms