RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 OR10X1Q8NGY0 326 aa8.85□□□□□ -0.99
RABGGTA-204ENST00000558376 HSD17B10Q99714 261 aaKnown RBP8.85□□□□□ -0.99
RABGGTA-204ENST00000558376 MAGT1Q9H0U3 335 aa8.85□□□□□ -0.99
RABGGTA-204ENST00000558376 LIN7CQ9NUP9 197 aaKnown RBP8.85□□□□□ -0.99
RABGGTA-204ENST00000558376 PITPNC1Q9UKF7 332 aa8.85□□□□□ -0.99
RABGGTA-204ENST00000558376 LSM5Q9Y4Y9 91 aaKnown RBP8.85□□□□□ -0.99
RABGGTA-204ENST00000558376 SESN1Q9Y6P5 492 aa8.85□□□□□ -0.99
RABGGTA-204ENST00000558376 IGHV2-26A0A0B4J1V2 119 aa8.85□□□□□ -0.99
RABGGTA-204ENST00000558376 TCRBV4S1A1TA0A5B7 111 aa8.85□□□□□ -0.99
RABGGTA-204ENST00000558376 DYNLT3P51808 116 aa8.85□□□□□ -0.99
RABGGTA-204ENST00000558376 SRPXP78539 464 aa8.85□□□□□ -0.99
RABGGTA-204ENST00000558376 CATR1Q13166 79 aa8.85□□□□□ -0.99
RABGGTA-204ENST00000558376 SSX9Q7RTT3 188 aa8.85□□□□□ -0.99
RABGGTA-204ENST00000558376 OR11H6Q8NGC7 330 aa8.85□□□□□ -0.99
RABGGTA-204ENST00000558376 THAP6Q8TBB0 222 aa8.85□□□□□ -0.99
RABGGTA-204ENST00000558376 RRNAD1Q96FB5 475 aaKnown RBP8.85□□□□□ -0.99
RABGGTA-204ENST00000558376 HILPDAQ9Y5L2 63 aa8.85□□□□□ -0.99
RABGGTA-204ENST00000558376 A0A087X0M5 115 aa8.84□□□□□ -0.99
RABGGTA-204ENST00000558376 A0A1B0GX30 115 aa8.84□□□□□ -0.99
RABGGTA-204ENST00000558376 TOR1AO14656 332 aa8.84□□□□□ -0.99
RABGGTA-204ENST00000558376 AKR1C2P52895 323 aa8.84□□□□□ -0.99
RABGGTA-204ENST00000558376 FGL1Q08830 312 aa8.84□□□□□ -0.99
RABGGTA-204ENST00000558376 EGFEM1PQ0D2K5 195 aa8.84□□□□□ -0.99
RABGGTA-204ENST00000558376 MSMO1Q15800 293 aa8.84□□□□□ -0.99
RABGGTA-204ENST00000558376 OR4D5Q8NGN0 318 aa8.84□□□□□ -0.99
RABGGTA-204ENST00000558376 OR13D1Q8NGV5 346 aa8.84□□□□□ -0.99
RABGGTA-204ENST00000558376 OR9G1Q8NH87 305 aa8.84□□□□□ -0.99
RABGGTA-204ENST00000558376 OR1S1Q8NH92 325 aa8.84□□□□□ -0.99
RABGGTA-204ENST00000558376 RNASE11Q8TAA1 199 aaKnown RBP8.84□□□□□ -0.99
RABGGTA-204ENST00000558376 DDB2Q92466 427 aa8.84□□□□□ -0.99
RABGGTA-204ENST00000558376 RCC1LQ96I51 464 aaKnown RBP8.84□□□□□ -0.99
RABGGTA-204ENST00000558376 S1PR3Q99500 378 aa8.84□□□□□ -0.99
RABGGTA-204ENST00000558376 GAB2Q9UQC2 676 aa8.84□□□□□ -0.99
RABGGTA-204ENST00000558376 NSG2Q9Y328 171 aa8.84□□□□□ -0.99
RABGGTA-204ENST00000558376 PF4P02776 101 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 IGKV1-16P04430 117 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 SLC25A4P12235 298 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 POLR2GP62487 172 aaKnown RBP eCLIP8.83□□□□□ -1
RABGGTA-204ENST00000558376 TAGLNQ01995 201 aaKnown RBP8.83□□□□□ -1
RABGGTA-204ENST00000558376 CD69Q07108 199 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 TMEM30BQ3MIR4 351 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 C10orf99Q6UWK7 81 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 CENPVQ7Z7K6 275 aaPredicted RBP8.83□□□□□ -1
RABGGTA-204ENST00000558376 ASB13Q8WXK3 278 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 DCUN1D4Q92564 292 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 IL22RA2Q969J5 263 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 B9D2Q9BPU9 175 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 MRPL20Q9BYC9 149 aaKnown RBP8.83□□□□□ -1
RABGGTA-204ENST00000558376 MFFQ9GZY8 342 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 CACNG5Q9UF02 275 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 TSSC4Q9Y5U2 329 aaPredicted RBP8.83□□□□□ -1
RABGGTA-204ENST00000558376 MSGN1A6NI15 193 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 HMSDA8MTL9 139 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 K7EPK0 472 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 B3GALNT1O75752 331 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 CRYZL1O95825 349 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 ZNF833PQ6ZTB9 187 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 FAM71E2Q8N5Q1 922 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 ZNF596Q8TC21 504 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 ST6GALNAC6Q969X2 333 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 RITA1Q96K30 269 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 TNFSF18Q9UNG2 199 aa8.83□□□□□ -1
RABGGTA-204ENST00000558376 STAB2Q8WWQ8 2551 aa8.82□□□□□ -1
RABGGTA-204ENST00000558376 IGHV3-72A0A0B4J1Y9 119 aa8.82□□□□□ -1
RABGGTA-204ENST00000558376 TRAV3A0A0B4J244 114 aa8.82□□□□□ -1
RABGGTA-204ENST00000558376 SRRM4A7MD48 611 aaKnown RBP8.82□□□□□ -1
RABGGTA-204ENST00000558376 L7N2F9 121 aa8.82□□□□□ -1
RABGGTA-204ENST00000558376 IGLV1-47P01700 117 aa8.82□□□□□ -1
RABGGTA-204ENST00000558376 CD24P25063 80 aa8.82□□□□□ -1
RABGGTA-204ENST00000558376 PRSS54Q6PEW0 395 aa8.82□□□□□ -1
RABGGTA-204ENST00000558376 TMEM65Q6PI78 240 aa8.82□□□□□ -1
RABGGTA-204ENST00000558376 TMUB2Q71RG4 321 aa8.82□□□□□ -1
RABGGTA-204ENST00000558376 ZNF767PQ75MW2 155 aa8.82□□□□□ -1
RABGGTA-204ENST00000558376 LINC00311Q8N616 119 aa8.82□□□□□ -1
RABGGTA-204ENST00000558376 LINC00482Q8N8I6 264 aa8.82□□□□□ -1
RABGGTA-204ENST00000558376 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.82□□□□□ -1
RABGGTA-204ENST00000558376 CLEC7AQ9BXN2 247 aa8.82□□□□□ -1
RABGGTA-204ENST00000558376 PRELID3BQ9Y3B1 194 aa8.82□□□□□ -1
RABGGTA-204ENST00000558376 RNF222A6NCQ9 220 aa8.81□□□□□ -1
RABGGTA-204ENST00000558376 SH2D7A6NKC9 451 aaPredicted RBP8.81□□□□□ -1
RABGGTA-204ENST00000558376 MARCH11A6NNE9 402 aa8.81□□□□□ -1
RABGGTA-204ENST00000558376 BUB1B-PAK6H3BSN5 160 aa8.81□□□□□ -1
RABGGTA-204ENST00000558376 PITX3O75364 302 aa8.81□□□□□ -1
RABGGTA-204ENST00000558376 DEDDO75618 318 aa8.81□□□□□ -1
RABGGTA-204ENST00000558376 HPRT1P00492 218 aa8.81□□□□□ -1
RABGGTA-204ENST00000558376 RBP4P02753 201 aa8.81□□□□□ -1
RABGGTA-204ENST00000558376 NKX2-1P43699 371 aaPredicted RBP8.81□□□□□ -1
RABGGTA-204ENST00000558376 PRRX1P54821 245 aa8.81□□□□□ -1
RABGGTA-204ENST00000558376 ID3Q02535 119 aa8.81□□□□□ -1
RABGGTA-204ENST00000558376 HLA-DRB5Q30154 266 aa8.81□□□□□ -1
RABGGTA-204ENST00000558376 MINOS1Q5TGZ0 78 aa8.81□□□□□ -1
RABGGTA-204ENST00000558376 DMBX1Q8NFW5 382 aa8.81□□□□□ -1
RABGGTA-204ENST00000558376 OR4P4Q8NGL7 312 aa8.81□□□□□ -1
RABGGTA-204ENST00000558376 LSM10Q969L4 123 aaKnown RBP8.81□□□□□ -1
RABGGTA-204ENST00000558376 ARL6Q9H0F7 186 aa8.81□□□□□ -1
RABGGTA-204ENST00000558376 RCL1Q9Y2P8 373 aaKnown RBP8.81□□□□□ -1
RABGGTA-204ENST00000558376 MINOS1-NBL1R4GNA1 71 aa8.81□□□□□ -1
RABGGTA-204ENST00000558376 SACSQ9NZJ4 4579 aa8.81□□□□□ -1
RABGGTA-204ENST00000558376 A0A1B0GU03 582 aa8.81□□□□□ -1
RABGGTA-204ENST00000558376 DUXBA0A1W2PPF3 345 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms