RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 TIMD4Q96H15 378 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 ZNF714Q96N38 554 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 CLCC1Q96S66 551 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 ABHD14AQ9BUJ0 271 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 REG4Q9BYZ8 158 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 SMIM3Q9BZL3 60 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 WFDC1Q9HC57 220 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 PARP11Q9NR21 331 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 CBLN4Q9NTU7 201 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 PSENENQ9NZ42 101 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 HSPB7Q9UBY9 170 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 MIOXQ9UGB7 285 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 STRAPQ9Y3F4 350 aaKnown RBP3.63□□□□□ -1.83
SRP54-212ENST00000556992 ZNF407Q9C0G0 2248 aa3.63□□□□□ -1.83
SRP54-212ENST00000556992 A0A087X0M5 115 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 A0A0G2JRQ6 117 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 A0A1B0GX30 115 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 IGSF23A1L1A6 192 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 CEBPZOSA8MTT3 80 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 I3L521 148 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 FCGR3BO75015 233 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 CST7O76096 145 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 S1PR2O95136 353 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 PLAUP00749 431 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 IFNA17P01571 189 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 RBP4P02753 201 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 PRH1P02810 166 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 OR8U8P0C7N1 319 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 DANCRP0C864 163 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 SPP1P10451 314 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 COL8A2P25067 703 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 IL3RAP26951 378 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 LOXP28300 417 aaPredicted RBP3.62□□□□□ -1.83
SRP54-212ENST00000556992 MC5RP33032 325 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 DYNLT3P51808 116 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 F2RL1P55085 397 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 SPCS3P61009 180 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 RAB2AP61019 212 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 GNB2P62879 340 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 TFF3Q07654 80 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 ZNF816Q0VGE8 651 aaPredicted RBP3.62□□□□□ -1.83
SRP54-212ENST00000556992 PJVKQ0ZLH3 352 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 TWIST1Q15672 202 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 RTL8BQ17RB0 113 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 AARDQ4LEZ3 155 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 RPL39P5Q59GN2 51 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 OR2B11Q5JQS5 317 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 FAM74A1Q5RGS3 127 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 DHRS7BQ6IAN0 325 aaPredicted RBP3.62□□□□□ -1.83
SRP54-212ENST00000556992 FAM53AQ6NSI3 398 aaPredicted RBP3.62□□□□□ -1.83
SRP54-212ENST00000556992 SLC25A24Q6NUK1 477 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 LYPD2Q6UXB3 125 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 DPPA3Q6W0C5 159 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 SLC25A48Q6ZT89 311 aaKnown RBP3.62□□□□□ -1.83
SRP54-212ENST00000556992 TGIF2LYQ8IUE0 185 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 LYG1Q8N1E2 194 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 LINC00311Q8N616 119 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 TMEM217Q8N7C4 229 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 ZNF439Q8NDP4 499 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 OR5C1Q8NGR4 320 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 OR4S2Q8NH73 311 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 H1FXQ92522 213 aaKnown RBP3.62□□□□□ -1.83
SRP54-212ENST00000556992 TNFRSF14Q92956 283 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 TMEM186Q96B77 213 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 PINX1Q96BK5 328 aaKnown RBP3.62□□□□□ -1.83
SRP54-212ENST00000556992 CXorf58Q96LI9 332 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 ATP5SQ99766 215 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 IFI27L2Q9H2X8 130 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 RBKSQ9H477 322 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 MMP26Q9NRE1 261 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 C19orf12Q9NSK7 152 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 DCAF16Q9NXF7 216 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 FKBP11Q9NYL4 201 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 NCKAP5O14513 1909 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 CELSR1Q9NYQ6 3014 aa3.62□□□□□ -1.83
SRP54-212ENST00000556992 ADGRG4Q8IZF6 3080 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 SAA2-SAA4A0A096LPE2 208 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 MEX3AA1L020 520 aaKnown RBP3.61□□□□□ -1.83
SRP54-212ENST00000556992 BTBD17A6NE02 478 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 J3QKU1 62 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 J3QR06 171 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 GOSR1O95249 250 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 IGHV3-7P01780 117 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 SAA2P0DJI9 122 aaPredicted RBP3.61□□□□□ -1.83
SRP54-212ENST00000556992 CT45A6P0DMU7 189 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 CT45A5P0DMU8 189 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 CT45A7P0DMV0 189 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 SELLP14151 372 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 ZP3P21754 424 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 GNLYP22749 145 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 CAMLGP49069 296 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 HSPE1P61604 102 aaKnown RBP3.61□□□□□ -1.83
SRP54-212ENST00000556992 SERF2P84101 59 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 TLE4Q04727 773 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 CLINT1Q14677 625 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 PEA15Q15121 130 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 POU2AF1Q16633 256 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 IZUMO4Q1ZYL8 232 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 LRRC75BQ2VPJ9 315 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 TMEM155Q4W5P6 130 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms