RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 HAPLN4Q86UW8 402 aa5.32□□□□□ -1.56
LINC00517-202ENST00000554257 PPP1R27Q86WC6 154 aa5.32□□□□□ -1.56
LINC00517-202ENST00000554257 OR5R1Q8NH85 324 aa5.32□□□□□ -1.56
LINC00517-202ENST00000554257 MYOZ3Q8TDC0 251 aa5.32□□□□□ -1.56
LINC00517-202ENST00000554257 C22orf15Q8WYQ4 148 aa5.32□□□□□ -1.56
LINC00517-202ENST00000554257 SLC25A33Q9BSK2 321 aa5.32□□□□□ -1.56
LINC00517-202ENST00000554257 FBXL15Q9H469 300 aa5.32□□□□□ -1.56
LINC00517-202ENST00000554257 CACNG5Q9UF02 275 aa5.32□□□□□ -1.56
LINC00517-202ENST00000554257 FLNBO75369 2602 aaKnown RBP5.32□□□□□ -1.56
LINC00517-202ENST00000554257 TRRAPQ9Y4A5 3859 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 FAM90A26D6RGX4 464 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 DEDDO75618 318 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 CA2P00918 260 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 HRASP01112 189 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 CRYGCP07315 174 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 HOXB5P09067 269 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 FAM157CP0CG43 387 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 FAM106CPP0CH98 169 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 MDKP21741 143 aaPredicted RBP5.31□□□□□ -1.56
LINC00517-202ENST00000554257 PPIFP30405 207 aaKnown RBP5.31□□□□□ -1.56
LINC00517-202ENST00000554257 TNFRSF9Q07011 255 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 KIAA0141Q14154 515 aaPredicted RBP5.31□□□□□ -1.56
LINC00517-202ENST00000554257 C10orf55Q5SWW7 151 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 ZNF695Q8IW36 515 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 RRNAD1Q96FB5 475 aaKnown RBP5.31□□□□□ -1.56
LINC00517-202ENST00000554257 WNT10AQ9GZT5 417 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 C16orf95Q9H693 158 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 RANGRFQ9HD47 186 aaPredicted RBP5.31□□□□□ -1.56
LINC00517-202ENST00000554257 OR5AC2Q9NZP5 309 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 TENM1Q9UKZ4 2725 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 SLC25A4P12235 298 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 UBA52P62987 128 aaKnown RBP5.31□□□□□ -1.56
LINC00517-202ENST00000554257 ZNF562Q6V9R5 426 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 Q71RC1 249 aaPredicted RBP5.31□□□□□ -1.56
LINC00517-202ENST00000554257 SSMEM1Q8WWF3 244 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 ZDHHC16Q969W1 377 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 TSNAXQ99598 290 aaKnown RBP5.31□□□□□ -1.56
LINC00517-202ENST00000554257 RBKSQ9H477 322 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 SERTAD4Q9NUC0 356 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 METTL1Q9UBP6 276 aaKnown RBP5.31□□□□□ -1.56
LINC00517-202ENST00000554257 NSG2Q9Y328 171 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 SHOXO15266 292 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 TSPAN9O75954 239 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 SERPINE2P07093 398 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 BLCAPP62952 87 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 LAMTOR1Q6IAA8 161 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 STPG2Q8N412 459 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 RNF152Q8N8N0 203 aa5.31□□□□□ -1.56
LINC00517-202ENST00000554257 RNF222A6NCQ9 220 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 SH2D7A6NKC9 451 aaPredicted RBP5.3□□□□□ -1.56
LINC00517-202ENST00000554257 SMLR1H3BR10 107 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 SOX15O60248 233 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 IGLV1-40P01703 118 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 BRS3P32247 399 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 RPL15P61313 204 aaKnown RBP5.3□□□□□ -1.56
LINC00517-202ENST00000554257 RAB32Q13637 225 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 PRIMA1Q86XR5 153 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 OR4C12Q96R67 309 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 SRSF8Q9BRL6 282 aaKnown RBP5.3□□□□□ -1.56
LINC00517-202ENST00000554257 MED28Q9H204 178 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 C1RLQ9NZP8 487 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 TRBV9A0A0B4J1U6 114 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 C15orf62A8K5M9 175 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 F8W735 103 aaPredicted RBP5.3□□□□□ -1.56
LINC00517-202ENST00000554257 H7C2Y5 167 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 FBXO24O75426 580 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 MPC2O95563 127 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 S100GP29377 79 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 RPS16P62249 146 aaKnown RBP5.3□□□□□ -1.56
LINC00517-202ENST00000554257 SSX9Q7RTT3 188 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 TTC9CQ8N5M4 171 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 OR10W1Q8NGF6 305 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 SGMS2Q8NHU3 365 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 RANBP3Q9H6Z4 567 aaPredicted RBP5.3□□□□□ -1.56
LINC00517-202ENST00000554257 OR51B2Q9Y5P1 312 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 CSPG4Q6UVK1 2322 aa5.3□□□□□ -1.56
LINC00517-202ENST00000554257 GPR137BO60478 399 aa5.29□□□□□ -1.56
LINC00517-202ENST00000554257 CTRB1P17538 263 aa5.29□□□□□ -1.56
LINC00517-202ENST00000554257 SRD5A1P18405 259 aa5.29□□□□□ -1.56
LINC00517-202ENST00000554257 SPCS3P61009 180 aa5.29□□□□□ -1.56
LINC00517-202ENST00000554257 RPL8P62917 257 aaKnown RBP5.29□□□□□ -1.56
LINC00517-202ENST00000554257 CX3CL1P78423 397 aa5.29□□□□□ -1.56
LINC00517-202ENST00000554257 MMDQ15546 238 aa5.29□□□□□ -1.56
LINC00517-202ENST00000554257 IAH1Q2TAA2 248 aaPredicted RBP5.29□□□□□ -1.56
LINC00517-202ENST00000554257 CTRB2Q6GPI1 263 aa5.29□□□□□ -1.56
LINC00517-202ENST00000554257 TMEM14EPQ6UXP3 125 aa5.29□□□□□ -1.56
LINC00517-202ENST00000554257 C19orf35Q6ZS72 473 aa5.29□□□□□ -1.56
LINC00517-202ENST00000554257 H2BFWTQ7Z2G1 175 aa5.29□□□□□ -1.56
LINC00517-202ENST00000554257 OR5B3Q8NH48 314 aa5.29□□□□□ -1.56
LINC00517-202ENST00000554257 PPP1R1CQ8WVI7 109 aa5.29□□□□□ -1.56
LINC00517-202ENST00000554257 TAF15Q92804 592 aaKnown RBP eCLIP5.29□□□□□ -1.56
LINC00517-202ENST00000554257 BSCL2Q96G97 398 aaPredicted RBP5.29□□□□□ -1.56
LINC00517-202ENST00000554257 PRNDQ9UKY0 176 aa5.29□□□□□ -1.56
LINC00517-202ENST00000554257 hCG_2014768A0A024R1R8 64 aa5.29□□□□□ -1.56
LINC00517-202ENST00000554257 NPIPB5A8MRT5 1133 aa5.29□□□□□ -1.56
LINC00517-202ENST00000554257 ATP6V0E1O15342 81 aa5.29□□□□□ -1.56
LINC00517-202ENST00000554257 RNASE2P10153 161 aaKnown RBP5.29□□□□□ -1.56
LINC00517-202ENST00000554257 AREGP15514 252 aa5.29□□□□□ -1.56
LINC00517-202ENST00000554257 TAS2R30P59541 319 aa5.29□□□□□ -1.56
LINC00517-202ENST00000554257 KRTAP10-3P60369 221 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms