RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 PSMB6P28072 239 aa10.07□□□□□ -0.8
HNRNPC-205ENST00000553300 ALDH3B2P48448 385 aa10.07□□□□□ -0.8
HNRNPC-205ENST00000553300 ERVK-16P61578 105 aa10.07□□□□□ -0.8
HNRNPC-205ENST00000553300 EXOSC2Q13868 293 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-205ENST00000553300 C15orf32Q32M92 178 aa10.07□□□□□ -0.8
HNRNPC-205ENST00000553300 THOC7Q6I9Y2 204 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-205ENST00000553300 HSD17B13Q7Z5P4 300 aaPredicted RBP10.07□□□□□ -0.8
HNRNPC-205ENST00000553300 DGCR14Q96DF8 476 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-205ENST00000553300 NAA50Q9GZZ1 169 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-205ENST00000553300 SIGLEC8Q9NYZ4 499 aa10.07□□□□□ -0.8
HNRNPC-205ENST00000553300 PEMTQ9UBM1 199 aa10.07□□□□□ -0.8
HNRNPC-205ENST00000553300 MARCH11A6NNE9 402 aa10.06□□□□□ -0.8
HNRNPC-205ENST00000553300 E7EUB6 86 aa10.06□□□□□ -0.8
HNRNPC-205ENST00000553300 H0Y980 276 aa10.06□□□□□ -0.8
HNRNPC-205ENST00000553300 CYB5BO43169 146 aa10.06□□□□□ -0.8
HNRNPC-205ENST00000553300 PRH1P02810 166 aa10.06□□□□□ -0.8
HNRNPC-205ENST00000553300 RLN1P04808 185 aa10.06□□□□□ -0.8
HNRNPC-205ENST00000553300 DEFA4P12838 97 aa10.06□□□□□ -0.8
HNRNPC-205ENST00000553300 CTRB1P17538 263 aa10.06□□□□□ -0.8
HNRNPC-205ENST00000553300 UCP3P55916 312 aa10.06□□□□□ -0.8
HNRNPC-205ENST00000553300 SYNJ2BPP57105 145 aa10.06□□□□□ -0.8
HNRNPC-205ENST00000553300 CTRB2Q6GPI1 263 aa10.06□□□□□ -0.8
HNRNPC-205ENST00000553300 RSRP1Q9BUV0 290 aa10.06□□□□□ -0.8
HNRNPC-205ENST00000553300 TMEM140Q9NV12 185 aa10.06□□□□□ -0.8
HNRNPC-205ENST00000553300 FBXL7Q9UJT9 491 aa10.06□□□□□ -0.8
HNRNPC-205ENST00000553300 OR2J3O76001 311 aa10.05□□□□□ -0.8
HNRNPC-205ENST00000553300 S1PR2O95136 353 aa10.05□□□□□ -0.8
HNRNPC-205ENST00000553300 TRBV12-3P01733 135 aa10.05□□□□□ -0.8
HNRNPC-205ENST00000553300 IFNA6P05013 189 aa10.05□□□□□ -0.8
HNRNPC-205ENST00000553300 TBPP20226 339 aa10.05□□□□□ -0.8
HNRNPC-205ENST00000553300 OR2B8PP59922 312 aa10.05□□□□□ -0.8
HNRNPC-205ENST00000553300 DEFA5Q01523 94 aa10.05□□□□□ -0.8
HNRNPC-205ENST00000553300 SLC38A6Q8IZM9 456 aa10.05□□□□□ -0.8
HNRNPC-205ENST00000553300 BCL7BQ9BQE9 202 aa10.05□□□□□ -0.8
HNRNPC-205ENST00000553300 QTRT1Q9BXR0 403 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-205ENST00000553300 FXYD6Q9H0Q3 95 aa10.05□□□□□ -0.8
HNRNPC-205ENST00000553300 THYN1Q9P016 225 aa10.05□□□□□ -0.8
HNRNPC-205ENST00000553300 EXTL2Q9UBQ6 330 aa10.05□□□□□ -0.8
HNRNPC-205ENST00000553300 A0A1B0GW64 132 aa10.04□□□□□ -0.8
HNRNPC-205ENST00000553300 BMPR1BO00238 502 aa10.04□□□□□ -0.8
HNRNPC-205ENST00000553300 GGCTO75223 188 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-205ENST00000553300 AREGP15514 252 aa10.04□□□□□ -0.8
HNRNPC-205ENST00000553300 LPAR6P43657 344 aa10.04□□□□□ -0.8
HNRNPC-205ENST00000553300 IL34Q6ZMJ4 242 aa10.04□□□□□ -0.8
HNRNPC-205ENST00000553300 ARRDC1Q8N5I2 433 aa10.04□□□□□ -0.8
HNRNPC-205ENST00000553300 RAB2BQ8WUD1 216 aa10.04□□□□□ -0.8
HNRNPC-205ENST00000553300 FCAMRQ8WWV6 532 aa10.04□□□□□ -0.8
HNRNPC-205ENST00000553300 CXorf58Q96LI9 332 aa10.04□□□□□ -0.8
HNRNPC-205ENST00000553300 FANCD2OSQ96PS1 177 aa10.04□□□□□ -0.8
HNRNPC-205ENST00000553300 TSC22D3Q99576 134 aa10.04□□□□□ -0.8
HNRNPC-205ENST00000553300 FKBP11Q9NYL4 201 aa10.04□□□□□ -0.8
HNRNPC-205ENST00000553300 RABL2AQ9UBK7 228 aaPredicted RBP10.04□□□□□ -0.8
HNRNPC-205ENST00000553300 RABL2BQ9UNT1 228 aa10.04□□□□□ -0.8
HNRNPC-205ENST00000553300 TRBV7-1A0A0A6YYK4 115 aa10.03□□□□□ -0.8
HNRNPC-205ENST00000553300 CGB1A6NKQ9 187 aa10.03□□□□□ -0.8
HNRNPC-205ENST00000553300 SNAPC5O75971 98 aa10.03□□□□□ -0.8
HNRNPC-205ENST00000553300 KRASP01116 189 aa10.03□□□□□ -0.8
HNRNPC-205ENST00000553300 TRAPPC2P0DI81 140 aa10.03□□□□□ -0.8
HNRNPC-205ENST00000553300 TRAPPC2BP0DI82 140 aa10.03□□□□□ -0.8
HNRNPC-205ENST00000553300 TMBIM6P55061 237 aa10.03□□□□□ -0.8
HNRNPC-205ENST00000553300 MRPS10P82664 201 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-205ENST00000553300 RNASE10Q5GAN6 216 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-205ENST00000553300 OR1L8Q8NGR8 309 aa10.03□□□□□ -0.8
HNRNPC-205ENST00000553300 OR2K2Q8NGT1 345 aa10.03□□□□□ -0.8
HNRNPC-205ENST00000553300 EEF1AKMT3Q96AZ1 226 aa10.03□□□□□ -0.8
HNRNPC-205ENST00000553300 ZNF486Q96H40 463 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-205ENST00000553300 KLK11Q9UBX7 282 aa10.03□□□□□ -0.8
HNRNPC-205ENST00000553300 MTFP1Q9UDX5 166 aa10.03□□□□□ -0.8
HNRNPC-205ENST00000553300 PRNDQ9UKY0 176 aa10.03□□□□□ -0.8
HNRNPC-205ENST00000553300 TENM3Q9P273 2699 aa10.03□□□□□ -0.8
HNRNPC-205ENST00000553300 IGLV11-55A0A075B6I3 123 aa10.02□□□□□ -0.8
HNRNPC-205ENST00000553300 TRAV3A0A0B4J244 114 aa10.02□□□□□ -0.8
HNRNPC-205ENST00000553300 IGLC7A0M8Q6 106 aa10.02□□□□□ -0.8
HNRNPC-205ENST00000553300 LGALS9O00182 355 aa10.02□□□□□ -0.8
HNRNPC-205ENST00000553300 RGS5O15539 181 aa10.02□□□□□ -0.8
HNRNPC-205ENST00000553300 NDUFB8O95169 186 aa10.02□□□□□ -0.8
HNRNPC-205ENST00000553300 CSN3P07498 182 aa10.02□□□□□ -0.8
HNRNPC-205ENST00000553300 PTBP1P26599 531 aaKnown RBP eCLIP10.02□□□□□ -0.8
HNRNPC-205ENST00000553300 SSBP1Q04837 148 aaKnown RBP10.02□□□□□ -0.8
HNRNPC-205ENST00000553300 ZNF585BQ52M93 769 aa10.02□□□□□ -0.8
HNRNPC-205ENST00000553300 PHLDA2Q53GA4 152 aa10.02□□□□□ -0.8
HNRNPC-205ENST00000553300 LCN12Q6JVE5 192 aa10.02□□□□□ -0.8
HNRNPC-205ENST00000553300 C11orf87Q6NUJ2 197 aa10.02□□□□□ -0.8
HNRNPC-205ENST00000553300 GPHB5Q86YW7 130 aa10.02□□□□□ -0.8
HNRNPC-205ENST00000553300 CLVS1Q8IUQ0 354 aaPredicted RBP10.02□□□□□ -0.8
HNRNPC-205ENST00000553300 Q8N402 240 aa10.02□□□□□ -0.8
HNRNPC-205ENST00000553300 WWC2-AS2Q96NR7 200 aa10.02□□□□□ -0.8
HNRNPC-205ENST00000553300 ABHD1Q96SE0 405 aa10.02□□□□□ -0.8
HNRNPC-205ENST00000553300 TEX50A0A1B0GTY4 177 aa10.01□□□□□ -0.81
HNRNPC-205ENST00000553300 SERPINE2P07093 398 aa10.01□□□□□ -0.81
HNRNPC-205ENST00000553300 MYOD1P15172 320 aa10.01□□□□□ -0.81
HNRNPC-205ENST00000553300 RPA2P15927 270 aa10.01□□□□□ -0.81
HNRNPC-205ENST00000553300 RPL5P46777 297 aaKnown RBP10.01□□□□□ -0.81
HNRNPC-205ENST00000553300 TAS2R19P59542 299 aa10.01□□□□□ -0.81
HNRNPC-205ENST00000553300 FAM106AQ4KMX7 169 aa10.01□□□□□ -0.81
HNRNPC-205ENST00000553300 TBC1D26Q86UD7 250 aa10.01□□□□□ -0.81
HNRNPC-205ENST00000553300 GDPD1Q8N9F7 314 aa10.01□□□□□ -0.81
HNRNPC-205ENST00000553300 TMEM229BQ8NBD8 167 aa10.01□□□□□ -0.81
HNRNPC-205ENST00000553300 OR1L6Q8NGR2 347 aa10.01□□□□□ -0.81
HNRNPC-205ENST00000553300 OR5B3Q8NH48 314 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms