RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 OR52B4Q8NGK2 314 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 CD300LFQ8TDQ1 290 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 SCARB1Q8WTV0 552 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 HSPB9Q9BQS6 159 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 BEX1Q9HBH7 125 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 PITPNC1Q9UKF7 332 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 SIGLEC9Q9Y336 463 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 IGHV7-81A0A0B4J1V7 117 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 DBX1A6NMT0 343 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 E7EUB6 86 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 SLC25A17O43808 307 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 SCO1O75880 301 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 SPDEFO95238 335 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 OR4E1P0C645 316 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 MYOD1P15172 320 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 RPA2P15927 270 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 IZUMO4Q1ZYL8 232 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 KRTAP24-1Q3LI83 254 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 Q6ZRM9 215 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 SGPP2Q8IWX5 399 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 LRTM2Q8N967 370 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 R3HDM4Q96D70 268 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 RHOVQ96L33 236 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 JMJD8Q96S16 334 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 COMMD9Q9P000 198 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 METTL1Q9UBP6 276 aaKnown RBP8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 PFDN2Q9UHV9 154 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 FBXO7Q9Y3I1 522 aa8.44□□□□□ -1.06
NPIPB3-210ENST00000542817 BTBD17A6NE02 478 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 CGB1A6NKQ9 187 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 MARCH11A6NNE9 402 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 NCBP2LA6PVI3 153 aaKnown RBP8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 G3V3Q6 166 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 KRASP01116 189 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 HLA-DRB1P01911 266 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 OR9G9P0C7N8 305 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 NQO2P16083 231 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 CXCL3P19876 107 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 G6PCP35575 357 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 HOXA1P49639 335 aaPredicted RBP8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 RPL15P61313 204 aaKnown RBP8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 PRSS8Q16651 343 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 OR4A47Q6IF82 309 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 SSX9Q7RTT3 188 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 LYG2Q86SG7 212 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 TEX45Q8NA69 505 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 TMEM167AQ8TBQ9 72 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 WIPF2Q8TF74 440 aaPredicted RBP8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 TSNAXQ99598 290 aaKnown RBP8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 SEC22CQ9BRL7 303 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 ZNF430Q9H8G1 570 aaPredicted RBP8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 SERTAD4Q9NUC0 356 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 TMEM140Q9NV12 185 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 BET1LQ9NYM9 111 aa8.43□□□□□ -1.06
NPIPB3-210ENST00000542817 FAM25EA8MYX2 175 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 M0QZK8 103 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 UPK2O00526 184 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 TSPAN4O14817 238 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 KBTBD11O94819 623 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 NDUFA7O95182 113 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 CFDP00746 253 aaPredicted RBP8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 HRASP01112 189 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 IFNA2P01563 188 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 IGHG2P01859 326 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 SERPINE2P07093 398 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 S100GP29377 79 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 TMEM95Q3KNT9 176 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 AARDQ4LEZ3 155 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 C19orf54Q5BKX5 351 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 NMSQ5H8A3 153 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 LIN54Q6MZP7 749 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 LYZL2Q7Z4W2 148 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 PPP1R27Q86WC6 154 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 OR2T35Q8NGX2 323 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 MITD1Q8WV92 249 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 IL22RA2Q969J5 263 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 C16orf95Q9H693 158 aa8.42□□□□□ -1.06
NPIPB3-210ENST00000542817 L7N2F9 121 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 DUS4LO95620 317 aaKnown RBP8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 CA2P00918 260 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 HLA-AP01891 365 aaKnown RBP8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 NMBP08949 121 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 HKR1P10072 659 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 VAMP1P23763 118 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 CX3CL1P78423 397 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 BTN1A1Q13410 526 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 C2orf68Q2NKX9 166 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 C10orf55Q5SWW7 151 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 ASPHD1Q5U4P2 390 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 TMEM268Q5VZI3 342 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 ZNF562Q6V9R5 426 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 SLC35G3Q8N808 338 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 LINC01006Q8NI28 216 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 CASTOR1Q8WTX7 329 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 GPR146Q96CH1 333 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 LINC00052Q96N35 136 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 CLCC1Q96S66 551 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 NPFFR1Q9GZQ6 430 aa8.41□□□□□ -1.06
NPIPB3-210ENST00000542817 WNT10AQ9GZT5 417 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms