RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 SLC9A3R2Q15599 337 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 PRSS8Q16651 343 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 IMPG1Q17R60 797 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 CEACAM21Q3KPI0 293 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 CLLU1Q5K131 121 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 LPCAT3Q6P1A2 487 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 C22orf39Q6P5X5 142 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 GALNT10Q86SR1 603 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 SLC35F6Q8N357 371 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 ZNF433Q8N7K0 673 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-217ENST00000541578 ZNF283Q8N7M2 679 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 GDPD1Q8N9F7 314 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 OR1L1Q8NH94 360 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 C16orf78Q8WTQ4 265 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 ORAOV1Q8WV07 137 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 RORBQ92753 470 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 FAM104AQ969W3 186 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 SMIM12Q96EX1 92 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 MRAP2Q96G30 205 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 OR10C1Q96KK4 312 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 AIF1LQ9BQI0 150 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 TCEAL2Q9H3H9 227 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-217ENST00000541578 ZNF430Q9H8G1 570 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-217ENST00000541578 EFCAB1Q9HAE3 211 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 WFDC1Q9HC57 220 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 TMEM138Q9NPI0 162 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 CISHQ9NSE2 258 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 IMP3Q9NV31 184 aaKnown RBP2.76□□□□□ -1.97
SNHG1-217ENST00000541578 USE1Q9NZ43 259 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 COMMD9Q9P000 198 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 SCP2D1Q9UJQ7 156 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 SSR3Q9UNL2 185 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.76□□□□□ -1.97
SNHG1-217ENST00000541578 OR51B4Q9Y5P0 310 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 INSIG2Q9Y5U4 225 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 YLPM1P49750 1951 aaKnown RBP2.76□□□□□ -1.97
SNHG1-217ENST00000541578 ARHGAP21Q5T5U3 1957 aa2.76□□□□□ -1.97
SNHG1-217ENST00000541578 IGLV3-16A0A075B6K0 115 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 IGHV3-49A0A0A0MS15 119 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 IGHV6-1A0A0B4J1U7 121 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 IGHV7-4-1A0A0J9YVY3 117 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 A0A1W2PQL4 384 aaPredicted RBP2.75□□□□□ -1.97
SNHG1-217ENST00000541578 WI2-2373I1.2A0A1W2PRP0 233 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 C5orf63A6NC05 138 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 FABP12A6NFH5 140 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 RBFOX3A6NFN3 312 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 H0YJW9 148 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 M0QXV9 152 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 CDIPTO14735 213 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 SNAPC5O75971 98 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 IFNA21P01568 189 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 ADRA2AP08913 450 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 ATF1P18846 271 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 MDKP21741 143 aaPredicted RBP2.75□□□□□ -1.97
SNHG1-217ENST00000541578 CASP1P29466 404 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 SLC6A1P30531 599 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 S100A11P31949 105 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 TMBIM6P55061 237 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 AQP5P55064 265 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 TMEM33P57088 247 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 RAB8AP61006 207 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 RAB2AP61019 212 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 PKIAP61925 76 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 LOXL1Q08397 574 aaPredicted RBP2.75□□□□□ -1.97
SNHG1-217ENST00000541578 SLAMF1Q13291 335 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 ZNF181Q2M3W8 571 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 OR10J3Q5JRS4 329 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 UBE2NLQ5JXB2 153 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 TRIQKQ629K1 86 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 KDM4DQ6B0I6 523 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 Q6ZS92 163 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 Q6ZT83 130 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 FAM19A1Q7Z5A9 133 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 KRTAP11-1Q8IUC1 163 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 TCTE3Q8IZS6 198 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 GAPTQ8N292 157 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 ZCCHC24Q8N2G6 241 aaKnown RBP2.75□□□□□ -1.97
SNHG1-217ENST00000541578 FDCSPQ8NFU4 85 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 OR2M7Q8NG81 312 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 OR10G2Q8NGC3 310 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 OR51D1Q8NGF3 324 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 OR2AE1Q8NHA4 323 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 RNASEH2CQ8TDP1 164 aaKnown RBP2.75□□□□□ -1.97
SNHG1-217ENST00000541578 C1orf54Q8WWF1 131 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 OR5P2Q8WZ92 322 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 RBPMSQ93062 196 aaKnown RBP2.75□□□□□ -1.97
SNHG1-217ENST00000541578 C12orf43Q96C57 262 aaKnown RBP2.75□□□□□ -1.97
SNHG1-217ENST00000541578 ISOC1Q96CN7 298 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 TLCD1Q96CP7 247 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 SLC25A31Q9H0C2 315 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 RHOFQ9HBH0 211 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 DMAC2Q9NW81 257 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 METTL1Q9UBP6 276 aaKnown RBP2.75□□□□□ -1.97
SNHG1-217ENST00000541578 RWDD2AQ9UIY3 292 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 ZNF337Q9Y3M9 751 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 TBL2Q9Y4P3 447 aaKnown RBP2.75□□□□□ -1.97
SNHG1-217ENST00000541578 INTS1Q8N201 2190 aaKnown RBP2.75□□□□□ -1.97
SNHG1-217ENST00000541578 FN1P02751 2386 aaKnown RBP2.75□□□□□ -1.97
SNHG1-217ENST00000541578 SPTBP11277 2137 aa2.75□□□□□ -1.97
SNHG1-217ENST00000541578 DNHD1Q96M86 4753 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms