RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 LHFPL1Q86WI0 220 aa9.42□□□□□ -0.9
CAPN1-223ENST00000533079 DRAXINQ8NBI3 349 aaPredicted RBP9.42□□□□□ -0.9
CAPN1-223ENST00000533079 LFNGQ8NES3 379 aa9.42□□□□□ -0.9
CAPN1-223ENST00000533079 OR2AK2Q8NG84 335 aa9.42□□□□□ -0.9
CAPN1-223ENST00000533079 OR13C8Q8NGS7 320 aa9.42□□□□□ -0.9
CAPN1-223ENST00000533079 OR5H2Q8NGV7 314 aa9.42□□□□□ -0.9
CAPN1-223ENST00000533079 GIMAP1Q8WWP7 306 aa9.42□□□□□ -0.9
CAPN1-223ENST00000533079 CMSS1Q9BQ75 279 aaKnown RBP9.42□□□□□ -0.9
CAPN1-223ENST00000533079 SULT4A1Q9BR01 284 aa9.42□□□□□ -0.9
CAPN1-223ENST00000533079 TAF9BQ9HBM6 251 aa9.42□□□□□ -0.9
CAPN1-223ENST00000533079 KCNIP1Q9NZI2 227 aa9.42□□□□□ -0.9
CAPN1-223ENST00000533079 PIPOXQ9P0Z9 390 aa9.42□□□□□ -0.9
CAPN1-223ENST00000533079 AK3Q9UIJ7 227 aa9.42□□□□□ -0.9
CAPN1-223ENST00000533079 ZNF221Q9UK13 617 aa9.42□□□□□ -0.9
CAPN1-223ENST00000533079 FLVCR2Q9UPI3 526 aa9.42□□□□□ -0.9
CAPN1-223ENST00000533079 NAPSAO96009 420 aa9.41□□□□□ -0.9
CAPN1-223ENST00000533079 CSN3P07498 182 aa9.41□□□□□ -0.9
CAPN1-223ENST00000533079 SULT1A3P0DMM9 295 aa9.41□□□□□ -0.9
CAPN1-223ENST00000533079 SULT1A4P0DMN0 295 aa9.41□□□□□ -0.9
CAPN1-223ENST00000533079 RCC1P18754 421 aaPredicted RBP9.41□□□□□ -0.9
CAPN1-223ENST00000533079 PPP1CCP36873 323 aaKnown RBP9.41□□□□□ -0.9
CAPN1-223ENST00000533079 OR3A3P47888 321 aa9.41□□□□□ -0.9
CAPN1-223ENST00000533079 GNMTQ14749 295 aa9.41□□□□□ -0.9
CAPN1-223ENST00000533079 SLC25A42Q86VD7 318 aa9.41□□□□□ -0.9
CAPN1-223ENST00000533079 ASB13Q8WXK3 278 aa9.41□□□□□ -0.9
CAPN1-223ENST00000533079 FAM103A1Q9BTL3 118 aaKnown RBP9.41□□□□□ -0.9
CAPN1-223ENST00000533079 C12orf4Q9NQ89 552 aa9.41□□□□□ -0.9
CAPN1-223ENST00000533079 ANXA10Q9UJ72 324 aa9.41□□□□□ -0.9
CAPN1-223ENST00000533079 KMT2AQ03164 3969 aa9.4□□□□□ -0.9
CAPN1-223ENST00000533079 CXorf65A6NEN9 183 aa9.4□□□□□ -0.9
CAPN1-223ENST00000533079 BOLA2-SMG1P6H3BVE0 249 aa9.4□□□□□ -0.9
CAPN1-223ENST00000533079 RAB29O14966 203 aa9.4□□□□□ -0.9
CAPN1-223ENST00000533079 CREBL2O60519 120 aaPredicted RBP9.4□□□□□ -0.9
CAPN1-223ENST00000533079 SNAPC5O75971 98 aa9.4□□□□□ -0.9
CAPN1-223ENST00000533079 CA2P00918 260 aa9.4□□□□□ -0.9
CAPN1-223ENST00000533079 FCGR3AP08637 254 aa9.4□□□□□ -0.9
CAPN1-223ENST00000533079 CD300CQ08708 224 aa9.4□□□□□ -0.9
CAPN1-223ENST00000533079 RPEL1Q2QD12 228 aa9.4□□□□□ -0.9
CAPN1-223ENST00000533079 GALMQ96C23 342 aa9.4□□□□□ -0.9
CAPN1-223ENST00000533079 TMEM68Q96MH6 324 aa9.4□□□□□ -0.9
CAPN1-223ENST00000533079 IFI27L2Q9H2X8 130 aa9.4□□□□□ -0.9
CAPN1-223ENST00000533079 SRD5A3Q9H8P0 318 aa9.4□□□□□ -0.9
CAPN1-223ENST00000533079 ZNF355PQ9NSJ1 428 aa9.4□□□□□ -0.9
CAPN1-223ENST00000533079 METTL1Q9UBP6 276 aaKnown RBP9.4□□□□□ -0.9
CAPN1-223ENST00000533079 PEF1Q9UBV8 284 aaKnown RBP9.4□□□□□ -0.9
CAPN1-223ENST00000533079 GPR132Q9UNW8 380 aa9.4□□□□□ -0.9
CAPN1-223ENST00000533079 GAB2Q9UQC2 676 aa9.4□□□□□ -0.9
CAPN1-223ENST00000533079 WASHC3Q9Y3C0 194 aa9.4□□□□□ -0.9
CAPN1-223ENST00000533079 UBE2QL1A1L167 161 aa9.39□□□□□ -0.91
CAPN1-223ENST00000533079 IZUMO1RA6ND01 250 aa9.39□□□□□ -0.91
CAPN1-223ENST00000533079 H0YJW9 148 aa9.39□□□□□ -0.91
CAPN1-223ENST00000533079 FCN1O00602 326 aa9.39□□□□□ -0.91
CAPN1-223ENST00000533079 PMP2P02689 132 aa9.39□□□□□ -0.91
CAPN1-223ENST00000533079 RLN1P04808 185 aa9.39□□□□□ -0.91
CAPN1-223ENST00000533079 CTXN2P0C2S0 81 aa9.39□□□□□ -0.91
CAPN1-223ENST00000533079 ANXA7P20073 488 aaKnown RBP9.39□□□□□ -0.91
CAPN1-223ENST00000533079 EIF2B2P49770 351 aaKnown RBP9.39□□□□□ -0.91
CAPN1-223ENST00000533079 TAS2R31P59538 309 aa9.39□□□□□ -0.91
CAPN1-223ENST00000533079 DHODHQ02127 395 aa9.39□□□□□ -0.91
CAPN1-223ENST00000533079 FCN2Q15485 313 aa9.39□□□□□ -0.91
CAPN1-223ENST00000533079 ZNF343Q6P1L6 599 aa9.39□□□□□ -0.91
CAPN1-223ENST00000533079 ZNF880Q6PDB4 577 aa9.39□□□□□ -0.91
CAPN1-223ENST00000533079 OR52L2PQ8NGH6 319 aa9.39□□□□□ -0.91
CAPN1-223ENST00000533079 ZNF431Q8TF32 576 aaPredicted RBP9.39□□□□□ -0.91
CAPN1-223ENST00000533079 GATAD1Q8WUU5 269 aa9.39□□□□□ -0.91
CAPN1-223ENST00000533079 MRGPRFQ96AM1 343 aa9.39□□□□□ -0.91
CAPN1-223ENST00000533079 TSNAXQ99598 290 aaKnown RBP9.39□□□□□ -0.91
CAPN1-223ENST00000533079 SLC23A1Q9UHI7 598 aa9.39□□□□□ -0.91
CAPN1-223ENST00000533079 MGAT4AQ9UM21 535 aa9.39□□□□□ -0.91
CAPN1-223ENST00000533079 KLK5Q9Y337 293 aaPredicted RBP9.39□□□□□ -0.91
CAPN1-223ENST00000533079 ANKRD34BA5PLL1 514 aa9.38□□□□□ -0.91
CAPN1-223ENST00000533079 OR11H12B2RN74 326 aa9.38□□□□□ -0.91
CAPN1-223ENST00000533079 H7C2Y5 167 aa9.38□□□□□ -0.91
CAPN1-223ENST00000533079 NDUFB8O95169 186 aa9.38□□□□□ -0.91
CAPN1-223ENST00000533079 DIRAS3O95661 229 aa9.38□□□□□ -0.91
CAPN1-223ENST00000533079 C1QBP02746 253 aa9.38□□□□□ -0.91
CAPN1-223ENST00000533079 OR4E1P0C645 316 aa9.38□□□□□ -0.91
CAPN1-223ENST00000533079 HLA-GP17693 338 aa9.38□□□□□ -0.91
CAPN1-223ENST00000533079 ATF4P18848 351 aaPredicted RBP9.38□□□□□ -0.91
CAPN1-223ENST00000533079 UCP3P55916 312 aa9.38□□□□□ -0.91
CAPN1-223ENST00000533079 TSPAN5P62079 268 aa9.38□□□□□ -0.91
CAPN1-223ENST00000533079 CBX3Q13185 183 aa9.38□□□□□ -0.91
CAPN1-223ENST00000533079 SCGB2B2Q4G0G5 96 aa9.38□□□□□ -0.91
CAPN1-223ENST00000533079 AADACL3Q5VUY0 350 aa9.38□□□□□ -0.91
CAPN1-223ENST00000533079 CEMP1Q6PRD7 247 aaPredicted RBP9.38□□□□□ -0.91
CAPN1-223ENST00000533079 DEFB125Q8N687 156 aa9.38□□□□□ -0.91
CAPN1-223ENST00000533079 OR11H7Q8NGC8 314 aa9.38□□□□□ -0.91
CAPN1-223ENST00000533079 OR5AN1Q8NGI8 311 aa9.38□□□□□ -0.91
CAPN1-223ENST00000533079 USMG5Q96IX5 58 aa9.38□□□□□ -0.91
CAPN1-223ENST00000533079 OR2A7Q96R45 310 aa9.38□□□□□ -0.91
CAPN1-223ENST00000533079 Q9N2K0 584 aa9.38□□□□□ -0.91
CAPN1-223ENST00000533079 ZNF230Q9UIE0 474 aaPredicted RBP9.38□□□□□ -0.91
CAPN1-223ENST00000533079 IGKV1D-8A0A087WSZ0 117 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 A0A0B4J2A0 478 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 SSNA1O43805 119 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 CD7P09564 240 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 CT45A6P0DMU7 189 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 CT45A5P0DMU8 189 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 CT45A7P0DMV0 189 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 ANXA3P12429 323 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms