RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 KIR2DS2P43631 304 aa8.1□□□□□ -1.11
CD44-227ENST00000528086 TAS2R31P59538 309 aa8.1□□□□□ -1.11
CD44-227ENST00000528086 TAS2R46P59540 309 aa8.1□□□□□ -1.11
CD44-227ENST00000528086 EXOSC2Q13868 293 aaKnown RBP8.1□□□□□ -1.11
CD44-227ENST00000528086 PHLDA2Q53GA4 152 aa8.1□□□□□ -1.11
CD44-227ENST00000528086 VAX1Q5SQQ9 334 aa8.1□□□□□ -1.11
CD44-227ENST00000528086 LAX1Q8IWV1 398 aa8.1□□□□□ -1.11
CD44-227ENST00000528086 DGCR14Q96DF8 476 aaKnown RBP8.1□□□□□ -1.11
CD44-227ENST00000528086 FYTTD1Q96QD9 318 aaKnown RBP8.1□□□□□ -1.11
CD44-227ENST00000528086 RSRP1Q9BUV0 290 aa8.1□□□□□ -1.11
CD44-227ENST00000528086 TMEM140Q9NV12 185 aa8.1□□□□□ -1.11
CD44-227ENST00000528086 EXTL2Q9UBQ6 330 aa8.1□□□□□ -1.11
CD44-227ENST00000528086 ZNF257Q9Y2Q1 563 aa8.1□□□□□ -1.11
CD44-227ENST00000528086 TEX50A0A1B0GTY4 177 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 MFSD2BA6NFX1 497 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 PPP5D1E7EU14 171 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 GPR31O00270 319 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 HRASP01112 189 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 IGHV3-23P01764 117 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 CD3DP04234 171 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 GP9P14770 177 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 NQO2P16083 231 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 ZP3P21754 424 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 RCVRNP35243 200 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 LPAR6P43657 344 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 UCP3P55916 312 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 HERV-K104P61576 105 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 WT1-ASQ06250 92 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 C15orf32Q32M92 178 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 GPR141Q7Z602 305 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 NECAP1Q8NC96 275 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 OR9G4Q8NGQ1 327 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 OR6F1Q8NGZ6 308 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 OR4A5Q8NH83 315 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 VSTM2AQ8TAG5 236 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 MTFP1Q9UDX5 166 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 FBXL7Q9UJT9 491 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 NSG2Q9Y328 171 aa8.09□□□□□ -1.11
CD44-227ENST00000528086 FAM223BA6NKX1 122 aa8.08□□□□□ -1.12
CD44-227ENST00000528086 MPPED1O15442 326 aa8.08□□□□□ -1.12
CD44-227ENST00000528086 ACTL6BO94805 426 aa8.08□□□□□ -1.12
CD44-227ENST00000528086 CD74P04233 296 aa8.08□□□□□ -1.12
CD44-227ENST00000528086 P0C879 139 aa8.08□□□□□ -1.12
CD44-227ENST00000528086 PI3P19957 117 aa8.08□□□□□ -1.12
CD44-227ENST00000528086 CD40LGP29965 261 aa8.08□□□□□ -1.12
CD44-227ENST00000528086 G6PCP35575 357 aa8.08□□□□□ -1.12
CD44-227ENST00000528086 ATP5G2Q06055 141 aa8.08□□□□□ -1.12
CD44-227ENST00000528086 CATR1Q13166 79 aa8.08□□□□□ -1.12
CD44-227ENST00000528086 CLVS1Q8IUQ0 354 aaPredicted RBP8.08□□□□□ -1.12
CD44-227ENST00000528086 SBSPONQ8IVN8 264 aa8.08□□□□□ -1.12
CD44-227ENST00000528086 FAM223AQ8IWN6 122 aa8.08□□□□□ -1.12
CD44-227ENST00000528086 CADM3Q8N126 398 aa8.08□□□□□ -1.12
CD44-227ENST00000528086 SEC22AQ96IW7 307 aa8.08□□□□□ -1.12
CD44-227ENST00000528086 ASCL2Q99929 193 aa8.08□□□□□ -1.12
CD44-227ENST00000528086 SOSTQ9BQB4 213 aa8.08□□□□□ -1.12
CD44-227ENST00000528086 SLIRPQ9GZT3 109 aaKnown RBP8.08□□□□□ -1.12
CD44-227ENST00000528086 HRASLSQ9HDD0 168 aa8.08□□□□□ -1.12
CD44-227ENST00000528086 NDUFA4L2Q9NRX3 87 aa8.08□□□□□ -1.12
CD44-227ENST00000528086 COMMD9Q9P000 198 aa8.08□□□□□ -1.12
CD44-227ENST00000528086 DYNC2H1Q8NCM8 4307 aaKnown RBP8.07□□□□□ -1.12
CD44-227ENST00000528086 SMIM31A0A1B0GVY4 71 aa8.07□□□□□ -1.12
CD44-227ENST00000528086 MARCH11A6NNE9 402 aa8.07□□□□□ -1.12
CD44-227ENST00000528086 FAM25AB3EWG3 89 aa8.07□□□□□ -1.12
CD44-227ENST00000528086 FAM25CB3EWG5 89 aa8.07□□□□□ -1.12
CD44-227ENST00000528086 FAM25GB3EWG6 89 aa8.07□□□□□ -1.12
CD44-227ENST00000528086 F8W735 103 aaPredicted RBP8.07□□□□□ -1.12
CD44-227ENST00000528086 H3BMQ9 156 aa8.07□□□□□ -1.12
CD44-227ENST00000528086 CREBL2O60519 120 aaPredicted RBP8.07□□□□□ -1.12
CD44-227ENST00000528086 OR2C1O95371 312 aa8.07□□□□□ -1.12
CD44-227ENST00000528086 KRASP01116 189 aa8.07□□□□□ -1.12
CD44-227ENST00000528086 FGF2P09038 288 aa8.07□□□□□ -1.12
CD44-227ENST00000528086 CD69Q07108 199 aa8.07□□□□□ -1.12
CD44-227ENST00000528086 IZUMO4Q1ZYL8 232 aa8.07□□□□□ -1.12
CD44-227ENST00000528086 FAAP20Q6NZ36 180 aa8.07□□□□□ -1.12
CD44-227ENST00000528086 MZT2AQ6P582 158 aa8.07□□□□□ -1.12
CD44-227ENST00000528086 TBC1D26Q86UD7 250 aa8.07□□□□□ -1.12
CD44-227ENST00000528086 SIGLEC8Q9NYZ4 499 aa8.07□□□□□ -1.12
CD44-227ENST00000528086 SELENOKQ9Y6D0 94 aa8.07□□□□□ -1.12
CD44-227ENST00000528086 CEPT1Q9Y6K0 416 aa8.07□□□□□ -1.12
CD44-227ENST00000528086 NBEAL2Q6ZNJ1 2754 aa8.07□□□□□ -1.12
CD44-227ENST00000528086 TPPPO94811 219 aa8.06□□□□□ -1.12
CD44-227ENST00000528086 LY86O95711 162 aa8.06□□□□□ -1.12
CD44-227ENST00000528086 IGKV1-5P01602 117 aa8.06□□□□□ -1.12
CD44-227ENST00000528086 PTBP1P26599 531 aaKnown RBP eCLIP8.06□□□□□ -1.123e-6■■■■■ 30.2
CD44-227ENST00000528086 TMBIM6P55061 237 aa8.06□□□□□ -1.12
CD44-227ENST00000528086 CLEC19AQ6UXS0 136 aa8.06□□□□□ -1.12
CD44-227ENST00000528086 OR6Q1Q8NGQ2 317 aa8.06□□□□□ -1.12
CD44-227ENST00000528086 ZNF502Q8TBZ5 544 aa8.06□□□□□ -1.12
CD44-227ENST00000528086 CD300LFQ8TDQ1 290 aa8.06□□□□□ -1.12
CD44-227ENST00000528086 ISOC1Q96CN7 298 aa8.06□□□□□ -1.12
CD44-227ENST00000528086 OR4C12Q96R67 309 aa8.06□□□□□ -1.12
CD44-227ENST00000528086 TP53RKQ96S44 253 aa8.06□□□□□ -1.12
CD44-227ENST00000528086 QTRT1Q9BXR0 403 aaKnown RBP8.06□□□□□ -1.12
CD44-227ENST00000528086 NXF2Q9GZY0 626 aaKnown RBP8.06□□□□□ -1.12
CD44-227ENST00000528086 TMEM14BQ9NUH8 114 aa8.06□□□□□ -1.12
CD44-227ENST00000528086 C19orf73Q9NVV2 129 aa8.06□□□□□ -1.12
CD44-227ENST00000528086 SACSQ9NZJ4 4579 aa8.05□□□□□ -1.12
CD44-227ENST00000528086 A0A0G2JRQ6 117 aa8.05□□□□□ -1.12
CD44-227ENST00000528086 TMEM213A2RRL7 107 aa8.05□□□□□ -1.12
CD44-227ENST00000528086 ZNF785A8K8V0 405 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms