RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 NMRAL1Q9HBL8 299 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 IL36GQ9NZH8 169 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 COMMD9Q9P000 198 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 MDFICQ9P1T7 246 aa6.3□□□□□ -1.4
HDAC3-216ENST00000523088 C9orf118A6NHY6 69 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 TMEM250H0YL14 139 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 GABARAPH6UMI1 98 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 PLPP2O43688 288 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 NPIPB7O75200 414 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 UBL3O95164 117 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 ZNF682O95780 498 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 CSN3P07498 182 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 TACSTD2P09758 323 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 DANCRP0C864 163 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 PPIBP23284 216 aaKnown RBP6.29□□□□□ -1.4
HDAC3-216ENST00000523088 PPIFP30405 207 aaKnown RBP6.29□□□□□ -1.4
HDAC3-216ENST00000523088 SRP14P37108 136 aaKnown RBP6.29□□□□□ -1.4
HDAC3-216ENST00000523088 LEPP41159 167 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 GNG5P63218 68 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 TGFBR3Q03167 851 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 IZUMO4Q1ZYL8 232 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 C11orf87Q6NUJ2 197 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 LYPD4Q6UWN0 246 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 VN1R4Q7Z5H5 301 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 SLC35F2Q8IXU6 374 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 OR8G5Q8NG78 346 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 OR4F17Q8NGA8 305 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 NT5CQ8TCD5 201 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 DDIT4LQ96D03 193 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 TVP23CQ96ET8 276 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 GMPPAQ96IJ6 420 aaPredicted RBP6.29□□□□□ -1.4
HDAC3-216ENST00000523088 OR4F4Q96R69 305 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 RHOJQ9H4E5 214 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 GP6Q9HCN6 339 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 KIAA1456Q9P272 454 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 NOP16Q9Y3C1 178 aaKnown RBP6.29□□□□□ -1.4
HDAC3-216ENST00000523088 PAM16Q9Y3D7 125 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 OARD1Q9Y530 152 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 LINC00312Q9Y6C7 94 aa6.29□□□□□ -1.4
HDAC3-216ENST00000523088 MYO7BQ6PIF6 2116 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 NBPF19A0A087WUL8 3843 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 TEX48A0A1B0GUV7 120 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 OR2T8A6NH00 312 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 ZNF860A6NHJ4 632 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 TMEM262E9PQX1 116 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 GEMIN2O14893 280 aaKnown RBP6.28□□□□□ -1.4
HDAC3-216ENST00000523088 ZNF354AO60765 605 aaPredicted RBP6.28□□□□□ -1.4
HDAC3-216ENST00000523088 RENP00797 406 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 HRASP01112 189 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 KRASP01116 189 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 P04436 131 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 IL3P08700 152 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 NDUFV3P56181 108 aaKnown RBP6.28□□□□□ -1.4
HDAC3-216ENST00000523088 MTCP1P56278 107 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 PCBP3P57721 371 aaKnown RBP6.28□□□□□ -1.4
HDAC3-216ENST00000523088 COL10A1Q03692 680 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 DUSP2Q05923 314 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 MEF2CQ06413 473 aaPredicted RBP6.28□□□□□ -1.4
HDAC3-216ENST00000523088 CATR1Q13166 79 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 MYBPHQ13203 477 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 KLF9Q13886 244 aaPredicted RBP6.28□□□□□ -1.4
HDAC3-216ENST00000523088 MEIG1Q5JSS6 88 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 UBE2NLQ5JXB2 153 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 TSPO2Q5TGU0 170 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 ANKRD16Q6P6B7 361 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 CBLL1Q75N03 491 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 DTX2Q86UW9 622 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 SAXO1Q8IYX7 474 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 ZIC4Q8N9L1 334 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 OR4C16Q8NGL9 310 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 NEIL2Q969S2 332 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 UBE2E3Q969T4 207 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 PLEKHB2Q96CS7 222 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 IMMP1LQ96LU5 166 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 HSD17B10Q99714 261 aaKnown RBP6.28□□□□□ -1.4
HDAC3-216ENST00000523088 SCRT1Q9BWW7 348 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 TM2D2Q9BX73 214 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 GABARAPL3Q9BY60 117 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 SLC25A39Q9BZJ4 359 aaPredicted RBP6.28□□□□□ -1.4
HDAC3-216ENST00000523088 DCAF13Q9NV06 445 aaKnown RBP6.28□□□□□ -1.4
HDAC3-216ENST00000523088 LAMP3Q9UQV4 416 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 GTF3C1Q12789 2109 aa6.28□□□□□ -1.4
HDAC3-216ENST00000523088 CACNA1DQ01668 2161 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 TRBV6-7A0A0A0MS04 114 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 A0A1W2PS29 197 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 ZNF850A8MQ14 1090 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 MPDU1O75352 247 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 PTHP01270 115 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 LINC00869P0C866 280 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 HOXB4P17483 251 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-216ENST00000523088 GCSHP23434 173 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 PRPH2P23942 346 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 GRNP28799 593 aaKnown RBP6.27□□□□□ -1.41
HDAC3-216ENST00000523088 RPL13AP40429 203 aaKnown RBP6.27□□□□□ -1.41
HDAC3-216ENST00000523088 Q0VFX4 171 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 Q0VG73 95 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 RAB40BQ12829 278 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 C1DQ13901 141 aaKnown RBP6.27□□□□□ -1.41
HDAC3-216ENST00000523088 ZNF146Q15072 292 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 Q6AWC8 147 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms