RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ZNF44P15621 663 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 GLP1RP43220 463 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 NPBWR2P48146 333 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 INPP1P49441 399 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 RBP2P50120 134 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 CRIP2P52943 208 aaPredicted RBP3.7□□□□□ -1.82
SDCBP-207ENST00000520168 ATP1B3P54709 279 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 RPS11P62280 158 aaKnown RBP eCLIP3.7□□□□□ -1.82
SDCBP-207ENST00000520168 PAX5Q02548 391 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 ROM1Q03395 351 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 AESQ08117 197 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 FGL1Q08830 312 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 TMEM267Q0VDI3 215 aaPredicted RBP3.7□□□□□ -1.82
SDCBP-207ENST00000520168 DIAPH2-AS1Q14236 149 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 ZNF79Q15937 498 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 TATDN3Q17R31 274 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 TP53I3Q53FA7 332 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 HSD17B12Q53GQ0 312 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 TRIQKQ629K1 86 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 CNIH2Q6PI25 160 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 SLC25A26Q70HW3 274 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 SSX6Q7RTT6 188 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 SNX29P2Q8IUI4 249 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 LINC00311Q8N616 119 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 TMEM116Q8NCL8 245 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 DUSP18Q8NEJ0 188 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 OR51T1Q8NGJ9 327 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 OR9G4Q8NGQ1 327 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 OR2G2Q8NGZ5 317 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 OR10J5Q8NHC4 309 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 STOML3Q8TAV4 291 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 GPR148Q8TDV2 347 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 RTN4IP1Q8WWV3 396 aaPredicted RBP3.7□□□□□ -1.82
SDCBP-207ENST00000520168 C10orf35Q96D05 121 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 BSCL2Q96G97 398 aaPredicted RBP3.7□□□□□ -1.82
SDCBP-207ENST00000520168 PACRGQ96M98 296 aaPredicted RBP3.7□□□□□ -1.82
SDCBP-207ENST00000520168 C2orf88Q9BSF0 95 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 CHRDL1Q9BU40 450 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 KRTAP3-1Q9BYR8 98 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 COMMD4Q9H0A8 199 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 PPIL3Q9H2H8 161 aaKnown RBP3.7□□□□□ -1.82
SDCBP-207ENST00000520168 TMEM231Q9H6L2 316 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 PLEKHA3Q9HB20 300 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 IFT46Q9NQC8 304 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 CALYQ9NYX4 217 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 MLXQ9UH92 298 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 RNF150Q9ULK6 438 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 MGAT4AQ9UM21 535 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 FOXA2Q9Y261 457 aaPredicted RBP3.7□□□□□ -1.82
SDCBP-207ENST00000520168 TP53TG1Q9Y2A0 90 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 TNFRSF18Q9Y5U5 241 aa3.7□□□□□ -1.82
SDCBP-207ENST00000520168 TRBV5-7A0A0A0MS05 114 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 A0A0G2JLM5 398 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 TRBV5-5A0A0J9YX44 114 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 A0A1B0GW15 77 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 TMEM213A2RRL7 107 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 OR4C45A6NMZ5 311 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 IFITM5A6NNB3 132 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 CENPXA8MT69 81 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 G3V318 75 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 AIPO00170 330 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 SIRPB1O00241 398 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 GOSR2O14653 212 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 CTDSPLO15194 276 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 GSTZ1O43708 216 aaPredicted RBP3.69□□□□□ -1.82
SDCBP-207ENST00000520168 RBMXL2O75526 392 aaKnown RBP3.69□□□□□ -1.82
SDCBP-207ENST00000520168 TTRP02766 147 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 TRAPPC2P0DI81 140 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 TRAPPC2BP0DI82 140 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 CGB3P0DN86 165 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 CGB7P0DN87 165 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 ZNF20P17024 532 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 ELK1P19419 428 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 BCL3P20749 454 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 CCL1P22362 96 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 ZNF137PP52743 207 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 F2RL1P55085 397 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 RAB32Q13637 225 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 INSL4Q14641 139 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 MMDQ15546 238 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 Q499Y3 187 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 C5orf47Q569G3 176 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 BCL2L15Q5TBC7 163 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 FAM53AQ6NSI3 398 aaPredicted RBP3.69□□□□□ -1.82
SDCBP-207ENST00000520168 PLET1Q6UQ28 207 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 ZNF562Q6V9R5 426 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 NRARPQ7Z6K4 114 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 TMED4Q7Z7H5 227 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 HAPLN4Q86UW8 402 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 NR2C2APQ86WQ0 139 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 SAMD12Q8N8I0 201 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 CCDC71LQ8N9Z2 235 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 OR14K1Q8NGZ2 314 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 PP6455Q8WZ26 134 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 MARC2Q969Z3 335 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 COQ2Q96H96 371 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 DERL3Q96Q80 235 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 SPACA5Q96QH8 159 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 PFDN5Q99471 154 aa3.69□□□□□ -1.82
SDCBP-207ENST00000520168 SPAG8Q99932 426 aaPredicted RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms