RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 CENPXA8MT69 81 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 RRHO14718 337 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SLC25A17O43808 307 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CNIH1O95406 144 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 HRASP01112 189 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 RLN1P04808 185 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 RPA2P15927 270 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 KIR2DS2P43631 304 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 LPAR6P43657 344 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 VDAC2P45880 294 aaPredicted RBP4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 COMPP49747 757 aaPredicted RBP4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 PIGPP57054 158 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 BLOC1S1P78537 153 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 EIF4EBP1Q13541 118 aaPredicted RBP4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 KLF9Q13886 244 aaPredicted RBP4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 ZNF846Q147U1 533 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 MSMO1Q15800 293 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 C5orf64Q2M2E5 130 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 VMA21Q3ZAQ7 101 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 LINC00299Q6ZSB3 139 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SSX9Q7RTT3 188 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SLC35E3Q7Z769 313 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TBC1D26Q86UD7 250 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 VKORC1L1Q8N0U8 176 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 NPBQ8NG41 125 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 OR13C8Q8NGS7 320 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 OR4S2Q8NH73 311 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 MARCH1Q8TCQ1 289 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 HARBI1Q96MB7 349 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 C8orf49Q96NF6 230 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SCGB3A2Q96PL1 93 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SDHCQ99643 169 aaPredicted RBP4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 MLST8Q9BVC4 326 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 HSPB7Q9UBY9 170 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 LINC00527Q9UJ94 153 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 GPR132Q9UNW8 380 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 C14orf166Q9Y224 244 aaKnown RBP4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 MMP24Q9Y5R2 645 aa4.58□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TEX13DA0A0J9YY54 714 aaPredicted RBP4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 NAP1L6A6NFF2 107 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 FCN1O00602 326 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 KCNAB3O43448 404 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 RAMP3O60896 148 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 OR2A4O95047 310 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 HPRT1P00492 218 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 IGLV2-23P01705 113 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SERPINE2P07093 398 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CTSDP07339 412 aaPredicted RBP4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 IL7P13232 177 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 F2RP25116 425 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 PROK1P58294 105 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 BRWD1-AS2P59051 145 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 UBE2KP61086 200 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 GNB1P62873 340 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SRSF4Q08170 494 aaKnown RBP4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TMEM65Q6PI78 240 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 PPP1R27Q86WC6 154 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 FOXRED2Q8IWF2 684 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 Q8N2B8 174 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 FAM71E2Q8N5Q1 922 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 KLHDC1Q8N7A1 406 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CCDC71LQ8N9Z2 235 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 DMBX1Q8NFW5 382 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 OR5AU1Q8NGC0 362 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SPATA3Q8NHX4 192 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 OSR1Q8TAX0 266 aaPredicted RBP4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CD300LFQ8TDQ1 290 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 ZNF486Q96H40 463 aaPredicted RBP4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 NOL4LQ96MY1 436 aaPredicted RBP4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 OR2A7Q96R45 310 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 C5orf66Q9H5L9 145 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 PARP11Q9NR21 331 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SLC2A9Q9NRM0 540 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 WSB1Q9Y6I7 421 aa4.57□□□□□ -1.68
SCARNA6.1-201ENST00000516989 IGHV7-81A0A0B4J1V7 117 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 C3orf85A0A1B0GTC6 90 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 PSMB11A5LHX3 300 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 RBFOX2O43251 390 aaKnown RBP eCLIP4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 S1PR2O95136 353 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 NDUFA3O95167 84 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CA2P00918 260 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 KRASP01116 189 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 IGHG2P01859 326 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 HLA-DRB1P01911 266 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 OPN1MWP04001 364 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CRYGBP07316 175 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 OPN1MW2P0DN77 364 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 OPN1MW3P0DN78 364 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 NQO2P16083 231 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 AKR1C4P17516 323 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CD40LGP29965 261 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CCR6P51684 374 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TAS2R31P59538 309 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 ERVK-16P61578 105 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 RND3P61587 244 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SLC35B1P78383 322 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CX3CL1P78423 397 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TMEM267Q0VDI3 215 aaPredicted RBP4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 PJVKQ0ZLH3 352 aa4.56□□□□□ -1.68
SCARNA6.1-201ENST00000516989 FXYD3Q14802 87 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 270.7 ms