RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	COMP	P49747	757 aa	Predicted RBP	11.41	□□□□□ -0.58
MATR3-238	ENST00000512107	C4orf46	Q504U0	113 aa		11.41	□□□□□ -0.58
MATR3-238	ENST00000512107	LCNL1	Q6ZST4	164 aa		11.41	□□□□□ -0.58
MATR3-238	ENST00000512107	ZNF329	Q86UD4	541 aa		11.41	□□□□□ -0.58
MATR3-238	ENST00000512107	ZNF695	Q8IW36	515 aa		11.41	□□□□□ -0.58
MATR3-238	ENST00000512107	STPG2	Q8N412	459 aa		11.41	□□□□□ -0.58
MATR3-238	ENST00000512107	KLHDC1	Q8N7A1	406 aa		11.41	□□□□□ -0.58
MATR3-238	ENST00000512107	LRTM2	Q8N967	370 aa		11.41	□□□□□ -0.58
MATR3-238	ENST00000512107	OR4F5	Q8NH21	305 aa		11.41	□□□□□ -0.58
MATR3-238	ENST00000512107	KCNIP3	Q9Y2W7	256 aa		11.41	□□□□□ -0.58
MATR3-238	ENST00000512107	RNF114	Q9Y508	228 aa		11.41	□□□□□ -0.58
MATR3-238	ENST00000512107	MMP24	Q9Y5R2	645 aa		11.41	□□□□□ -0.58
MATR3-238	ENST00000512107	MSGN1	A6NI15	193 aa		11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	HAX1	O00165	279 aa		11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	RBMXL2	O75526	392 aa	Known RBP	11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	PTTG1	O95997	202 aa		11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	IGF1	P05019	195 aa		11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	IL5	P05113	134 aa		11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	HOXB5	P09067	269 aa		11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	PPIF	P30405	207 aa	Known RBP	11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	CRIP2	P52943	208 aa	Predicted RBP	11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	SPINK9	Q5DT21	86 aa		11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	H2BFWT	Q7Z2G1	175 aa		11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	MMD2	Q8IY49	270 aa		11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	LGI3	Q8N145	548 aa		11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	LFNG	Q8NES3	379 aa		11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	OR10W1	Q8NGF6	305 aa		11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	OR4A5	Q8NH83	315 aa		11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	OR2T6	Q8NHC8	308 aa		11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	ZNF431	Q8TF32	576 aa	Predicted RBP	11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	MITD1	Q8WV92	249 aa		11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	SRSF12	Q8WXF0	261 aa	Known RBP	11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	ARPC1A	Q92747	370 aa		11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	IL22RA2	Q969J5	263 aa		11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	WDR89	Q96FK6	387 aa	Predicted RBP	11.4	□□□□□ -0.58
MATR3-238	ENST00000512107	C15orf61	A6NNL5	157 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	CCS	O14618	274 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	B3GALNT1	O75752	331 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	NXPH3	O95157	252 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	DUS4L	O95620	317 aa	Known RBP	11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	CD28	P10747	220 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	AREG	P15514	252 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	AKR1C2	P52895	323 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	ERVK-16	P61578	105 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	RPL8	P62917	257 aa	Known RBP	11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	DEFA5	Q01523	94 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	OXA1L	Q15070	435 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	ECSCR	Q19T08	205 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	GGNBP1	Q5YKI7	109 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	PLET1	Q6UQ28	207 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	CADM3	Q8N126	398 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	C11orf44	Q8N8P7	122 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	SGMS2	Q8NHU3	365 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	WFDC12	Q8WWY7	111 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	TMEM158	Q8WZ71	300 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	TMEM14B	Q9NUH8	114 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107	CACNG5	Q9UF02	275 aa		11.39	□□□□□ -0.59
MATR3-238	ENST00000512107		A0A0B4J2A0	478 aa		11.38	□□□□□ -0.59
MATR3-238	ENST00000512107	ST8SIA3	O43173	380 aa		11.38	□□□□□ -0.59
MATR3-238	ENST00000512107	CNIH1	O95406	144 aa		11.38	□□□□□ -0.59
MATR3-238	ENST00000512107	REG1A	P05451	166 aa		11.38	□□□□□ -0.59
MATR3-238	ENST00000512107	RPL27A	P46776	148 aa	Known RBP	11.38	□□□□□ -0.59
MATR3-238	ENST00000512107	C18orf65	Q6ZTR6	163 aa		11.38	□□□□□ -0.59
MATR3-238	ENST00000512107	MINDY2	Q8NBR6	621 aa		11.38	□□□□□ -0.59
MATR3-238	ENST00000512107	OR5T1	Q8NG75	326 aa		11.38	□□□□□ -0.59
MATR3-238	ENST00000512107	VSTM2A	Q8TAG5	236 aa		11.38	□□□□□ -0.59
MATR3-238	ENST00000512107	ABHD5	Q8WTS1	349 aa		11.38	□□□□□ -0.59
MATR3-238	ENST00000512107	LSM10	Q969L4	123 aa	Known RBP	11.38	□□□□□ -0.59
MATR3-238	ENST00000512107	OR10C1	Q96KK4	312 aa		11.38	□□□□□ -0.59
MATR3-238	ENST00000512107	FYTTD1	Q96QD9	318 aa	Known RBP	11.38	□□□□□ -0.59
MATR3-238	ENST00000512107	KLK15	Q9H2R5	256 aa		11.38	□□□□□ -0.59
MATR3-238	ENST00000512107	NDUFA4L2	Q9NRX3	87 aa		11.38	□□□□□ -0.59
MATR3-238	ENST00000512107	SHPK	Q9UHJ6	478 aa		11.38	□□□□□ -0.59
MATR3-238	ENST00000512107	FOXA2	Q9Y261	457 aa	Predicted RBP	11.38	□□□□□ -0.59
MATR3-238	ENST00000512107	OR51B2	Q9Y5P1	312 aa		11.38	□□□□□ -0.59
MATR3-238	ENST00000512107	DMRT1	Q9Y5R6	373 aa		11.38	□□□□□ -0.59
MATR3-238	ENST00000512107	TRAV41	A0A0B4J266	112 aa		11.37	□□□□□ -0.59
MATR3-238	ENST00000512107	IGLC7	A0M8Q6	106 aa		11.37	□□□□□ -0.59
MATR3-238	ENST00000512107	AP4M1	O00189	453 aa		11.37	□□□□□ -0.59
MATR3-238	ENST00000512107	PITX3	O75364	302 aa		11.37	□□□□□ -0.59
MATR3-238	ENST00000512107	PRH1	P02810	166 aa		11.37	□□□□□ -0.59
MATR3-238	ENST00000512107	ANXA3	P12429	323 aa		11.37	□□□□□ -0.59
MATR3-238	ENST00000512107	WT1-AS	Q06250	92 aa		11.37	□□□□□ -0.59
MATR3-238	ENST00000512107	FOXL1	Q12952	345 aa		11.37	□□□□□ -0.59
MATR3-238	ENST00000512107	KIAA0141	Q14154	515 aa	Predicted RBP	11.37	□□□□□ -0.59
MATR3-238	ENST00000512107	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.37	□□□□□ -0.59
MATR3-238	ENST00000512107	UNQ5815/PRO19632	Q6UWF5	114 aa		11.37	□□□□□ -0.59
MATR3-238	ENST00000512107	ALG5	Q9Y673	324 aa		11.37	□□□□□ -0.59
MATR3-238	ENST00000512107	ADARB2-AS1	A8MUL3	147 aa		11.36	□□□□□ -0.59
MATR3-238	ENST00000512107	KCNAB3	O43448	404 aa		11.36	□□□□□ -0.59
MATR3-238	ENST00000512107	IGLV1-40	P01703	118 aa		11.36	□□□□□ -0.59
MATR3-238	ENST00000512107	VDAC1	P21796	283 aa		11.36	□□□□□ -0.59
MATR3-238	ENST00000512107	MAS1L	P35410	378 aa		11.36	□□□□□ -0.59
MATR3-238	ENST00000512107	MFAP2	P55001	183 aa		11.36	□□□□□ -0.59
MATR3-238	ENST00000512107	RGS21	Q2M5E4	152 aa		11.36	□□□□□ -0.59
MATR3-238	ENST00000512107	AARD	Q4LEZ3	155 aa		11.36	□□□□□ -0.59
MATR3-238	ENST00000512107	FOXRED2	Q8IWF2	684 aa		11.36	□□□□□ -0.59
MATR3-238	ENST00000512107	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.36	□□□□□ -0.59
MATR3-238	ENST00000512107	OR4A16	Q8NH70	328 aa		11.36	□□□□□ -0.59
MATR3-238	ENST00000512107		A0A1W2PN81	502 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms