RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 TM4SF20Q53R12 229 aa8.33□□□□□ -1.08
UBE2D3-219ENST00000505207 THOC7Q6I9Y2 204 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-219ENST00000505207 LAMTOR1Q6IAA8 161 aa8.33□□□□□ -1.08
UBE2D3-219ENST00000505207 PLET1Q6UQ28 207 aa8.33□□□□□ -1.08
UBE2D3-219ENST00000505207 SSX9Q7RTT3 188 aa8.33□□□□□ -1.08
UBE2D3-219ENST00000505207 OR2C3Q8N628 320 aa8.33□□□□□ -1.08
UBE2D3-219ENST00000505207 TMEM217Q8N7C4 229 aa8.33□□□□□ -1.08
UBE2D3-219ENST00000505207 CD300LFQ8TDQ1 290 aa8.33□□□□□ -1.08
UBE2D3-219ENST00000505207 NUDCD2Q8WVJ2 157 aa8.33□□□□□ -1.08
UBE2D3-219ENST00000505207 CACNG8Q8WXS5 425 aa8.33□□□□□ -1.08
UBE2D3-219ENST00000505207 BORCS5Q969J3 196 aa8.33□□□□□ -1.08
UBE2D3-219ENST00000505207 CCDC140Q96MF4 163 aa8.33□□□□□ -1.08
UBE2D3-219ENST00000505207 COMMD5Q9GZQ3 224 aa8.33□□□□□ -1.08
UBE2D3-219ENST00000505207 MLXQ9UH92 298 aa8.33□□□□□ -1.08
UBE2D3-219ENST00000505207 ELF5Q9UKW6 265 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-219ENST00000505207 TP53TG1Q9Y2A0 90 aa8.33□□□□□ -1.08
UBE2D3-219ENST00000505207 CSMD3Q7Z407 3707 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 IGLV11-55A0A075B6I3 123 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 IGKV1D-13A0A0B4J2D9 117 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 TMEM235A6NFC5 223 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 HPRT1P00492 218 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 IGLV2-14P01704 120 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 FGF2P09038 288 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 C8orf88P0DMB2 117 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 IGKV1-13P0DP09 117 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 NQO2P16083 231 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 PTBP1P26599 531 aaKnown RBP eCLIP8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 FGF9P31371 208 aaPredicted RBP8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 FCGR2CP31995 323 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 BMI1P35226 326 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 TAS2R31P59538 309 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 EIF4EBP1Q13541 118 aaPredicted RBP8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 ZNF585BQ52M93 769 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 BTNL8Q6UX41 500 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 Q6ZWC4 215 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 HSD17B13Q7Z5P4 300 aaPredicted RBP8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 SPAG16Q8N0X2 631 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 SECTM1Q8WVN6 248 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 CNBD2Q96M20 576 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 SPAG8Q99932 426 aaPredicted RBP8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 OVOL2Q9BRP0 275 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 C5orf66Q9H5L9 145 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 DAPK2Q9UIK4 370 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 SSR3Q9UNL2 185 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 KLK5Q9Y337 293 aaPredicted RBP8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 S4R3C0 116 aa8.32□□□□□ -1.08
UBE2D3-219ENST00000505207 E7EUB6 86 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 SPRY2O43597 315 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 LY6G6CO95867 125 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 REG1AP05451 166 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 GPR183P32249 361 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 SCAND1P57086 179 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 OR2B8PP59922 312 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 TIMM50Q3ZCQ8 353 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 SPSB3Q6PJ21 355 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 WFDC3Q8IUB2 231 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 STPG3Q8N7X2 389 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 BEST4Q8NFU0 473 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 OR13F1Q8NGS4 319 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 VN1R17PQ8TDU5 208 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 NRG4Q8WWG1 115 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 LINC00476Q8WZB0 136 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 FCGR1BQ92637 280 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 ATP6V0BQ99437 205 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 C6orf62Q9GZU0 229 aaPredicted RBP8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 SLC5A7Q9GZV3 580 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 RRP15Q9Y3B9 282 aaKnown RBP8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 LYSTQ99698 3801 aa8.31□□□□□ -1.08
UBE2D3-219ENST00000505207 SACSQ9NZJ4 4579 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 A0A0A6YYH2 397 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 KIR2DL5BA0A0G2JN68 375 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 KIR2DL5BA0A0G2JPC4 375 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 A6NJ64 397 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 UPK2O00526 184 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 TNFSF12O43508 249 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 TRAPPC2P0DI81 140 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 TRAPPC2BP0DI82 140 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 ATF4P18848 351 aaPredicted RBP8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 EDN2P20800 178 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 PSMB9P28065 219 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 CBX5P45973 191 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 CMC4P56277 68 aaPredicted RBP8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 BRWD1-AS2P59051 145 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 GABARAPL2P60520 117 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 ERVK-16P61578 105 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 TNFRSF9Q07011 255 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 POU2AF1Q16633 256 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 C19orf35Q6ZS72 473 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 NR2C2APQ86WQ0 139 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 HOGA1Q86XE5 327 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 KIR2DL5AQ8N109 375 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 DMBX1Q8NFW5 382 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 KIR2DL5BQ8NHK3 375 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 ZNF502Q8TBZ5 544 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 QTRT1Q9BXR0 403 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 PLEKHA2Q9HB19 425 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 DIABLOQ9NR28 239 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 CCL28Q9NRJ3 127 aa8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 TXNL4BQ9NX01 149 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-219ENST00000505207 RHBDL2Q9NX52 303 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms