RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 KLF13Q9Y2Y9 288 aaPredicted RBP4.32□□□□□ -1.72
CLDND1-208ENST00000503004 MRPS16Q9Y3D3 137 aaKnown RBP4.32□□□□□ -1.72
CLDND1-208ENST00000503004 KMT2EQ8IZD2 1858 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 TRGV5A0A0B4J1U4 118 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 KIR2DS1A0A191URI9 304 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 FAM90A10PA6NDY2 464 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 FAM90A18PA6NE21 464 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 FAM90A16PA6NEW6 464 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 FAM90A20PA6NIJ5 464 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 FAM90A8PA6NJQ4 464 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 FAM90A7PA6NKC0 464 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 CEBPZOSA8MTT3 80 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 FAM90A22PA8MWA6 464 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 FAM90A12PA8MX19 464 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 FAM90A5PA8MXJ8 464 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 FAM90A23PA8MXZ1 464 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 SIRPB1O00241 398 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 SH2D1BO14796 132 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 MT-CO2P00403 227 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 FAM90A15PP0C7V4 464 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 FAM90A13PP0C7W8 464 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 FAM90A14PP0C7W9 464 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 FAM90A24PP0C7X0 464 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 KIR2DS4P43632 304 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 GALR1P47211 349 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 GNG3P63215 75 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 KIR2DS1Q14954 304 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 NMSQ5H8A3 153 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 GPR157Q5UAW9 335 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 WDR86Q86TI4 376 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 CXorf67Q86X51 503 aaPredicted RBP4.32□□□□□ -1.72
CLDND1-208ENST00000503004 ODF3L1Q8IXM7 274 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 TMEM252Q8N6L7 170 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 CLDND2Q8NHS1 167 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 WDYHV1Q96HA8 205 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 HINT2Q9BX68 163 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 CTDSP1Q9GZU7 261 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 DLL3Q9NYJ7 618 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 THYN1Q9P016 225 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 PPP1R3CQ9UQK1 317 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 PLCE1Q9P212 2302 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 TACC2O95359 2948 aa4.32□□□□□ -1.72
CLDND1-208ENST00000503004 CHST1O43916 411 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 RBMXL2O75526 392 aaKnown RBP4.31□□□□□ -1.72
CLDND1-208ENST00000503004 PGLYRP1O75594 196 aaPredicted RBP4.31□□□□□ -1.72
CLDND1-208ENST00000503004 ACTL6BO94805 426 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 TOX4O94842 621 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 IGLC1P0CG04 106 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 PSG2P11465 335 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 VDAC1P21796 283 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 RPL15P61313 204 aaKnown RBP4.31□□□□□ -1.72
CLDND1-208ENST00000503004 PSG9Q00887 426 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 PNRC1Q12796 327 aaPredicted RBP4.31□□□□□ -1.72
CLDND1-208ENST00000503004 ZNF154Q13106 437 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 TMEM41BQ5BJD5 291 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 ZNF766Q5HY98 468 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 FAM53AQ6NSI3 398 aaPredicted RBP4.31□□□□□ -1.72
CLDND1-208ENST00000503004 INO80CQ6PI98 192 aaPredicted RBP4.31□□□□□ -1.72
CLDND1-208ENST00000503004 Q6ZRM9 215 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 Q6ZS49 121 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 OR8I2Q8N0Y5 310 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 ATOH7Q8N100 152 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 OR4F17Q8NGA8 305 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 STARD4Q96DR4 205 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 BTF3L4Q96K17 158 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 OR4F4Q96R69 305 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 ATP5SQ99766 215 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 PARLQ9H300 379 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 ACACAQ13085 2346 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 HEATR1Q9H583 2144 aaKnown RBP4.31□□□□□ -1.72
CLDND1-208ENST00000503004 PCNX1Q96RV3 2341 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 TRAV8-6A0A0B4J262 113 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 LOC102723971A0A1B0GUV8 181 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 DEGS1O15121 323 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 NKX2-8O15522 239 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 TSPAN13O95857 204 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 IGLV2-14P01704 120 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 TFF1P04155 84 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 GRPP07492 148 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 F2RP25116 425 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 TIMP3P35625 211 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 DYNLT3P51808 116 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 TPPP2P59282 170 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 KRTDAPP60985 99 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 RPS16P62249 146 aaKnown RBP4.31□□□□□ -1.72
CLDND1-208ENST00000503004 RAB31Q13636 194 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 TMEM249Q2WGJ8 235 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 TCF23Q7RTU1 214 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 SCCPDHQ8NBX0 429 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 PLPPR1Q8TBJ4 325 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 OR5B12Q96R08 314 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 SMIM7Q9BQ49 75 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 FAM110AQ9BQ89 295 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 OR51I2Q9H344 312 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 C11orf1Q9H5F2 150 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 TAAR3PQ9P1P4 343 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 CDC42EP3Q9UKI2 254 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 OR2W1Q9Y3N9 320 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 MPC1Q9Y5U8 109 aa4.31□□□□□ -1.72
CLDND1-208ENST00000503004 TRBV7-9A0A0J9YWB2 115 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms