RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 MTFP1Q9UDX5 166 aa9.43□□□□□ -0.9
TRIM59-207ENST00000496222 ZNF257Q9Y2Q1 563 aa9.43□□□□□ -0.9
TRIM59-207ENST00000496222 FAM223BA6NKX1 122 aa9.42□□□□□ -0.9
TRIM59-207ENST00000496222 M0QYG6 137 aa9.42□□□□□ -0.9
TRIM59-207ENST00000496222 MPPED1O15442 326 aa9.42□□□□□ -0.9
TRIM59-207ENST00000496222 RNASE12Q5GAN4 147 aaKnown RBP9.42□□□□□ -0.9
TRIM59-207ENST00000496222 DEFB121Q5J5C9 76 aa9.42□□□□□ -0.9
TRIM59-207ENST00000496222 FAM223AQ8IWN6 122 aa9.42□□□□□ -0.9
TRIM59-207ENST00000496222 AIFM2Q9BRQ8 373 aa9.42□□□□□ -0.9
TRIM59-207ENST00000496222 TMEM140Q9NV12 185 aa9.42□□□□□ -0.9
TRIM59-207ENST00000496222 PEF1Q9UBV8 284 aaKnown RBP9.42□□□□□ -0.9
TRIM59-207ENST00000496222 ZNF256Q9Y2P7 627 aaPredicted RBP9.42□□□□□ -0.9
TRIM59-207ENST00000496222 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.41□□□□□ -0.9
TRIM59-207ENST00000496222 IGLC7A0M8Q6 106 aa9.41□□□□□ -0.9
TRIM59-207ENST00000496222 MARCH11A6NNE9 402 aa9.41□□□□□ -0.9
TRIM59-207ENST00000496222 H3BMQ9 156 aa9.41□□□□□ -0.9
TRIM59-207ENST00000496222 BMPR1BO00238 502 aa9.41□□□□□ -0.9
TRIM59-207ENST00000496222 SAP30O75446 220 aa9.41□□□□□ -0.9
TRIM59-207ENST00000496222 IGKV1-39P01597 117 aa9.41□□□□□ -0.9
TRIM59-207ENST00000496222 CD74P04233 296 aa9.41□□□□□ -0.9
TRIM59-207ENST00000496222 CD3DP04234 171 aa9.41□□□□□ -0.9
TRIM59-207ENST00000496222 IGKV1D-39P04432 117 aa9.41□□□□□ -0.9
TRIM59-207ENST00000496222 ZP3P21754 424 aa9.41□□□□□ -0.9
TRIM59-207ENST00000496222 PSMB6P28072 239 aa9.41□□□□□ -0.9
TRIM59-207ENST00000496222 LPAR6P43657 344 aa9.41□□□□□ -0.9
TRIM59-207ENST00000496222 TSPAN5P62079 268 aa9.41□□□□□ -0.9
TRIM59-207ENST00000496222 PHLDA2Q53GA4 152 aa9.41□□□□□ -0.9
TRIM59-207ENST00000496222 SLC25A42Q86VD7 318 aa9.41□□□□□ -0.9
TRIM59-207ENST00000496222 CMTM1Q8IZ96 169 aa9.41□□□□□ -0.9
TRIM59-207ENST00000496222 NECAP1Q8NC96 275 aa9.41□□□□□ -0.9
TRIM59-207ENST00000496222 OR4D10Q8NGI6 311 aa9.41□□□□□ -0.9
TRIM59-207ENST00000496222 FYTTD1Q96QD9 318 aaKnown RBP9.41□□□□□ -0.9
TRIM59-207ENST00000496222 SLIRPQ9GZT3 109 aaKnown RBP9.41□□□□□ -0.9
TRIM59-207ENST00000496222 HRASLSQ9HDD0 168 aa9.41□□□□□ -0.9
TRIM59-207ENST00000496222 FAM212BQ9NTI7 297 aaPredicted RBP9.41□□□□□ -0.9
TRIM59-207ENST00000496222 CCDC59Q9P031 241 aaKnown RBP9.41□□□□□ -0.9
TRIM59-207ENST00000496222 GABARAPH6UMI1 98 aa9.4□□□□□ -0.9
TRIM59-207ENST00000496222 OR2J3O76001 311 aa9.4□□□□□ -0.9
TRIM59-207ENST00000496222 NDUFB8O95169 186 aa9.4□□□□□ -0.9
TRIM59-207ENST00000496222 IGLV1-51P01701 117 aa9.4□□□□□ -0.9
TRIM59-207ENST00000496222 REG1AP05451 166 aa9.4□□□□□ -0.9
TRIM59-207ENST00000496222 RPA2P15927 270 aa9.4□□□□□ -0.9
TRIM59-207ENST00000496222 SPNP16150 400 aa9.4□□□□□ -0.9
TRIM59-207ENST00000496222 TBPP20226 339 aa9.4□□□□□ -0.9
TRIM59-207ENST00000496222 PTBP1P26599 531 aaKnown RBP eCLIP9.4□□□□□ -0.9
TRIM59-207ENST00000496222 SYNJ2BPP57105 145 aa9.4□□□□□ -0.9
TRIM59-207ENST00000496222 ATP5G2Q06055 141 aa9.4□□□□□ -0.9
TRIM59-207ENST00000496222 EXOSC2Q13868 293 aaKnown RBP9.4□□□□□ -0.9
TRIM59-207ENST00000496222 C15orf32Q32M92 178 aa9.4□□□□□ -0.9
TRIM59-207ENST00000496222 DMRTA1Q5VZB9 504 aa9.4□□□□□ -0.9
TRIM59-207ENST00000496222 LPCAT3Q6P1A2 487 aa9.4□□□□□ -0.9
TRIM59-207ENST00000496222 TBC1D26Q86UD7 250 aa9.4□□□□□ -0.9
TRIM59-207ENST00000496222 MRGPRFQ96AM1 343 aa9.4□□□□□ -0.9
TRIM59-207ENST00000496222 ISOC1Q96CN7 298 aa9.4□□□□□ -0.9
TRIM59-207ENST00000496222 B9D2Q9BPU9 175 aa9.4□□□□□ -0.9
TRIM59-207ENST00000496222 SOSTQ9BQB4 213 aa9.4□□□□□ -0.9
TRIM59-207ENST00000496222 CEPT1Q9Y6K0 416 aa9.4□□□□□ -0.9
TRIM59-207ENST00000496222 IGLV11-55A0A075B6I3 123 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 TEX50A0A1B0GTY4 177 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 DBX1A6NMT0 343 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 RGS5O15539 181 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 KRASP01116 189 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 CSN3P07498 182 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 G6PCP35575 357 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 MECP2P51608 486 aaKnown RBP9.39□□□□□ -0.91
TRIM59-207ENST00000496222 RND3P61587 244 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 WT1-ASQ06250 92 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 HAPLN4Q86UW8 402 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 SLC38A6Q8IZM9 456 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 ARRDC1Q8N5I2 433 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 TMEM229BQ8NBD8 167 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 DMBX1Q8NFW5 382 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 OR10W1Q8NGF6 305 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 OR9G4Q8NGQ1 327 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 C15orf40Q8WUR7 153 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 SEC22AQ96IW7 307 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 CCDC140Q96MF4 163 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 SRSF8Q9BRL6 282 aaKnown RBP9.39□□□□□ -0.91
TRIM59-207ENST00000496222 NXF2Q9GZY0 626 aaKnown RBP9.39□□□□□ -0.91
TRIM59-207ENST00000496222 NDUFA4L2Q9NRX3 87 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 FBXL7Q9UJT9 491 aa9.39□□□□□ -0.91
TRIM59-207ENST00000496222 CTDSPLO15194 276 aa9.38□□□□□ -0.91
TRIM59-207ENST00000496222 SSBP1Q04837 148 aaKnown RBP9.38□□□□□ -0.91
TRIM59-207ENST00000496222 RNASE10Q5GAN6 216 aaKnown RBP9.38□□□□□ -0.91
TRIM59-207ENST00000496222 ADAMTSL5Q6ZMM2 481 aa9.38□□□□□ -0.91
TRIM59-207ENST00000496222 SMIM4Q8WVI0 70 aa9.38□□□□□ -0.91
TRIM59-207ENST00000496222 ELOVL1Q9BW60 279 aa9.38□□□□□ -0.91
TRIM59-207ENST00000496222 QTRT1Q9BXR0 403 aaKnown RBP9.38□□□□□ -0.91
TRIM59-207ENST00000496222 TMEM14BQ9NUH8 114 aa9.38□□□□□ -0.91
TRIM59-207ENST00000496222 SIGLEC8Q9NYZ4 499 aa9.38□□□□□ -0.91
TRIM59-207ENST00000496222 NSG2Q9Y328 171 aa9.38□□□□□ -0.91
TRIM59-207ENST00000496222 HUWE1Q7Z6Z7 4374 aaKnown RBP9.38□□□□□ -0.91
TRIM59-207ENST00000496222 PPP5D1E7EU14 171 aa9.37□□□□□ -0.91
TRIM59-207ENST00000496222 P0C879 139 aa9.37□□□□□ -0.91
TRIM59-207ENST00000496222 GP9P14770 177 aa9.37□□□□□ -0.91
TRIM59-207ENST00000496222 PI3P19957 117 aa9.37□□□□□ -0.91
TRIM59-207ENST00000496222 MFAP2P55001 183 aa9.37□□□□□ -0.91
TRIM59-207ENST00000496222 MRPS10P82664 201 aaKnown RBP9.37□□□□□ -0.91
TRIM59-207ENST00000496222 DCTN2Q13561 401 aaKnown RBP9.37□□□□□ -0.91
TRIM59-207ENST00000496222 C11orf87Q6NUJ2 197 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms