RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 FAM201AQ5SY85 155 aa13.27□□□□□ -0.29
SEMA4D-220ENST00000492386 ITLN1Q8WWA0 313 aa13.27□□□□□ -0.29
SEMA4D-220ENST00000492386 TMEM204Q9BSN7 226 aa13.27□□□□□ -0.29
SEMA4D-220ENST00000492386 NCOR1P1Q9H4R4 102 aa13.27□□□□□ -0.29
SEMA4D-220ENST00000492386 ZFHX4Q86UP3 3567 aa13.27□□□□□ -0.29
SEMA4D-220ENST00000492386 SPRY3O43610 288 aa13.27□□□□□ -0.29
SEMA4D-220ENST00000492386 IL6RP08887 468 aaPredicted RBP13.27□□□□□ -0.29
SEMA4D-220ENST00000492386 KLF3P57682 345 aaPredicted RBP13.27□□□□□ -0.29
SEMA4D-220ENST00000492386 FOXL1Q12952 345 aa13.27□□□□□ -0.29
SEMA4D-220ENST00000492386 OR4A47Q6IF82 309 aa13.27□□□□□ -0.29
SEMA4D-220ENST00000492386 SFRP2Q96HF1 295 aa13.27□□□□□ -0.29
SEMA4D-220ENST00000492386 TMEM14BQ9NUH8 114 aa13.27□□□□□ -0.29
SEMA4D-220ENST00000492386 FOXA2Q9Y261 457 aaPredicted RBP13.27□□□□□ -0.29
SEMA4D-220ENST00000492386 YTHDF2Q9Y5A9 579 aaKnown RBP13.27□□□□□ -0.29
SEMA4D-220ENST00000492386 SCO2A0A1W2PP80 73 aa13.26□□□□□ -0.29
SEMA4D-220ENST00000492386 ZNF474Q6S9Z5 364 aaPredicted RBP13.26□□□□□ -0.29
SEMA4D-220ENST00000492386 RAI1Q7Z5J4 1906 aaPredicted RBP13.26□□□□□ -0.29
SEMA4D-220ENST00000492386 KBTBD11-OT1A0A1B0GTJ5 212 aa13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 SPAARA0A1B0GVQ0 90 aa13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 FTH1P19P0C7X4 201 aa13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 COL8A2P25067 703 aa13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 GLRXP35754 106 aa13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 DEFB109BQ30KR1 87 aa13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 SPATA31B1PQ5VZV4 182 aa13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 DUX4L9Q6RFH8 374 aaPredicted RBP13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 DEFB124Q8NES8 71 aa13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 SLC24A4Q8NFF2 622 aa13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 FAM222BQ8WU58 562 aa13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 SEPSECSQ9HD40 501 aaKnown RBP13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 A0A0U1RQK1 487 aa13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 ZNF320A2RRD8 509 aa13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 NPY1RP25929 384 aa13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 CNN1P51911 297 aaKnown RBP13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 HSPE1P61604 102 aaKnown RBP13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 EFNB3Q15768 340 aa13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 TIMM23BQ5SRD1 257 aa13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 VHLLQ6RSH7 139 aa13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 REC114Q7Z4M0 266 aa13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 STPG3Q8N7X2 389 aa13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 IDI2-AS1Q9NZ38 188 aa13.25□□□□□ -0.29
SEMA4D-220ENST00000492386 IGLV3-9A0A075B6K5 115 aa13.24□□□□□ -0.29
SEMA4D-220ENST00000492386 A0A087X0M5 115 aa13.24□□□□□ -0.29
SEMA4D-220ENST00000492386 A0A1B0GX30 115 aa13.24□□□□□ -0.29
SEMA4D-220ENST00000492386 CA2P00918 260 aa13.24□□□□□ -0.29
SEMA4D-220ENST00000492386 GCHFRP30047 84 aa13.24□□□□□ -0.29
SEMA4D-220ENST00000492386 THBS3P49746 956 aa13.24□□□□□ -0.29
SEMA4D-220ENST00000492386 TEPPQ6URK8 271 aa13.24□□□□□ -0.29
SEMA4D-220ENST00000492386 TCF23Q7RTU1 214 aa13.24□□□□□ -0.29
SEMA4D-220ENST00000492386 SGMS2Q8NHU3 365 aa13.24□□□□□ -0.29
SEMA4D-220ENST00000492386 ELOVL5Q9NYP7 299 aa13.24□□□□□ -0.29
SEMA4D-220ENST00000492386 MKRN2OSH3BPM6 223 aa13.24□□□□□ -0.29
SEMA4D-220ENST00000492386 GCGP01275 180 aa13.24□□□□□ -0.29
SEMA4D-220ENST00000492386 MYOD1P15172 320 aa13.24□□□□□ -0.29
SEMA4D-220ENST00000492386 GATA4P43694 442 aa13.24□□□□□ -0.29
SEMA4D-220ENST00000492386 ZNF439Q8NDP4 499 aa13.24□□□□□ -0.29
SEMA4D-220ENST00000492386 OCC1Q8TAD7 63 aa13.24□□□□□ -0.29
SEMA4D-220ENST00000492386 BTF3L4Q96K17 158 aa13.24□□□□□ -0.29
SEMA4D-220ENST00000492386 TRAPPC1Q9Y5R8 145 aa13.24□□□□□ -0.29
SEMA4D-220ENST00000492386 MDFIC2A0A1B0GVS7 189 aa13.23□□□□□ -0.29
SEMA4D-220ENST00000492386 CEACAM4O75871 244 aa13.23□□□□□ -0.29
SEMA4D-220ENST00000492386 TIMP3P35625 211 aa13.23□□□□□ -0.29
SEMA4D-220ENST00000492386 RPL29P47914 159 aaKnown RBP13.23□□□□□ -0.29
SEMA4D-220ENST00000492386 RHOBP62745 196 aa13.23□□□□□ -0.29
SEMA4D-220ENST00000492386 MRPS11P82912 194 aaKnown RBP13.23□□□□□ -0.29
SEMA4D-220ENST00000492386 TEX38Q6PEX7 206 aa13.23□□□□□ -0.29
SEMA4D-220ENST00000492386 LYG1Q8N1E2 194 aa13.23□□□□□ -0.29
SEMA4D-220ENST00000492386 RPRMLQ8N4K4 120 aa13.23□□□□□ -0.29
SEMA4D-220ENST00000492386 GBGT1Q8N5D6 347 aa13.23□□□□□ -0.29
SEMA4D-220ENST00000492386 TMEM18Q96B42 140 aa13.23□□□□□ -0.29
SEMA4D-220ENST00000492386 CHODLQ9H9P2 273 aa13.23□□□□□ -0.29
SEMA4D-220ENST00000492386 RAB9BQ9NP90 201 aa13.23□□□□□ -0.29
SEMA4D-220ENST00000492386 FAM215AQ9Y5M1 114 aa13.23□□□□□ -0.29
SEMA4D-220ENST00000492386 ASPMQ8IZT6 3477 aa13.23□□□□□ -0.29
SEMA4D-220ENST00000492386 CFAP47Q6ZTR5 3102 aa13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 FOXH1O75593 365 aa13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 PRR20EP86478 221 aa13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 PRR20CP86479 221 aa13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 PRR20DP86480 221 aa13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 PRR20BP86481 221 aa13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 PRR20AP86496 221 aa13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 POU2AF1Q16633 256 aa13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 STUMQ69YW2 141 aa13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 ZNF664Q8N3J9 261 aa13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 ZCCHC14Q8WYQ9 949 aaKnown RBP13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 GCM1Q9NP62 436 aa13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 TRGV10A0A0A0MS01 117 aa13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 HNF1AP20823 631 aa13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 RPL31P62899 125 aaKnown RBP13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 C3orf36Q3SXR2 165 aa13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 NEUROG1Q92886 237 aa13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 ADTRPQ96IZ2 230 aa13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 ENY2Q9NPA8 101 aa13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 RNF7Q9UBF6 113 aa13.22□□□□□ -0.29
SEMA4D-220ENST00000492386 IGFBP2P18065 325 aa13.21□□□□□ -0.29
SEMA4D-220ENST00000492386 OR10G8Q8NGN5 311 aa13.21□□□□□ -0.29
SEMA4D-220ENST00000492386 C11orf52Q96A22 123 aa13.21□□□□□ -0.29
SEMA4D-220ENST00000492386 GAFA1Q96PS6 74 aa13.21□□□□□ -0.29
SEMA4D-220ENST00000492386 OR51B2Q9Y5P1 312 aa13.21□□□□□ -0.29
SEMA4D-220ENST00000492386 A8MWP6 167 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms