RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 LALBAP00709 142 aa9.69□□□□□ -0.86
EXOSC3-207ENST00000490516 SPP1P10451 314 aa9.69□□□□□ -0.86
EXOSC3-207ENST00000490516 HTN3P15516 51 aa9.69□□□□□ -0.86
EXOSC3-207ENST00000490516 CRHBPP24387 322 aa9.69□□□□□ -0.86
EXOSC3-207ENST00000490516 MAS1LP35410 378 aa9.69□□□□□ -0.86
EXOSC3-207ENST00000490516 SERPINB10P48595 397 aa9.69□□□□□ -0.86
EXOSC3-207ENST00000490516 FAM3BP58499 235 aaPredicted RBP9.69□□□□□ -0.86
EXOSC3-207ENST00000490516 PLA2G7Q13093 441 aa9.69□□□□□ -0.86
EXOSC3-207ENST00000490516 ARFRP1Q13795 201 aa9.69□□□□□ -0.86
EXOSC3-207ENST00000490516 PUSL1Q8N0Z8 303 aaKnown RBP9.69□□□□□ -0.86
EXOSC3-207ENST00000490516 ZNF414Q96IQ9 312 aa9.69□□□□□ -0.86
EXOSC3-207ENST00000490516 C12orf4Q9NQ89 552 aa9.69□□□□□ -0.86
EXOSC3-207ENST00000490516 SMPD3Q9NY59 655 aaPredicted RBP9.69□□□□□ -0.86
EXOSC3-207ENST00000490516 HMCN2Q8NDA2 5059 aa9.69□□□□□ -0.86
EXOSC3-207ENST00000490516 KNCNA6PVL3 124 aa9.68□□□□□ -0.86
EXOSC3-207ENST00000490516 DFFBO76075 338 aa9.68□□□□□ -0.86
EXOSC3-207ENST00000490516 PAFAH1B2P68402 229 aa9.68□□□□□ -0.86
EXOSC3-207ENST00000490516 SPSB3Q6PJ21 355 aa9.68□□□□□ -0.86
EXOSC3-207ENST00000490516 ZNF66Q6ZN08 573 aa9.68□□□□□ -0.86
EXOSC3-207ENST00000490516 TCF24Q7RTU0 167 aa9.68□□□□□ -0.86
EXOSC3-207ENST00000490516 ZFP41Q8N8Y5 198 aa9.68□□□□□ -0.86
EXOSC3-207ENST00000490516 OR4A4PQ8NGN8 299 aa9.68□□□□□ -0.86
EXOSC3-207ENST00000490516 OR10J5Q8NHC4 309 aa9.68□□□□□ -0.86
EXOSC3-207ENST00000490516 ZNRF2Q8NHG8 242 aa9.68□□□□□ -0.86
EXOSC3-207ENST00000490516 VN1R17PQ8TDU5 208 aa9.68□□□□□ -0.86
EXOSC3-207ENST00000490516 SLC29A1Q99808 456 aa9.68□□□□□ -0.86
EXOSC3-207ENST00000490516 MS4A6AQ9H2W1 248 aa9.68□□□□□ -0.86
EXOSC3-207ENST00000490516 ARL2BPQ9Y2Y0 163 aa9.68□□□□□ -0.86
EXOSC3-207ENST00000490516 DNASE2O00115 360 aaPredicted RBP9.67□□□□□ -0.86
EXOSC3-207ENST00000490516 FABP7O15540 132 aa9.67□□□□□ -0.86
EXOSC3-207ENST00000490516 SMR3BP02814 79 aaPredicted RBP9.67□□□□□ -0.86
EXOSC3-207ENST00000490516 UBBP0CG47 229 aa9.67□□□□□ -0.86
EXOSC3-207ENST00000490516 SPART-AS1P0CW21 52 aa9.67□□□□□ -0.86
EXOSC3-207ENST00000490516 GABRB1P18505 474 aa9.67□□□□□ -0.86
EXOSC3-207ENST00000490516 ETV1P50549 477 aa9.67□□□□□ -0.86
EXOSC3-207ENST00000490516 EMP1P54849 157 aa9.67□□□□□ -0.86
EXOSC3-207ENST00000490516 RPL30P62888 115 aaKnown RBP9.67□□□□□ -0.86
EXOSC3-207ENST00000490516 HSP90B2PQ58FF3 399 aa9.67□□□□□ -0.86
EXOSC3-207ENST00000490516 YIF1BQ5BJH7 314 aa9.67□□□□□ -0.86
EXOSC3-207ENST00000490516 TMEM88Q6PEY1 159 aa9.67□□□□□ -0.86
EXOSC3-207ENST00000490516 NKAIN3Q8N8D7 197 aa9.67□□□□□ -0.86
EXOSC3-207ENST00000490516 VSTM2AQ8TAG5 236 aa9.67□□□□□ -0.86
EXOSC3-207ENST00000490516 PGLYRP3Q96LB9 341 aa9.67□□□□□ -0.86
EXOSC3-207ENST00000490516 CMSS1Q9BQ75 279 aaKnown RBP9.67□□□□□ -0.86
EXOSC3-207ENST00000490516 ATG101Q9BSB4 218 aa9.67□□□□□ -0.86
EXOSC3-207ENST00000490516 THYN1Q9P016 225 aa9.67□□□□□ -0.86
EXOSC3-207ENST00000490516 TRBV6-7A0A0A0MS04 114 aa9.66□□□□□ -0.86
EXOSC3-207ENST00000490516 IGLC7A0M8Q6 106 aa9.66□□□□□ -0.86
EXOSC3-207ENST00000490516 NUPL2O15504 423 aaKnown RBP9.66□□□□□ -0.86
EXOSC3-207ENST00000490516 CELP19835 753 aa9.66□□□□□ -0.86
EXOSC3-207ENST00000490516 FUSP35637 526 aaKnown RBP eCLIP9.66□□□□□ -0.86
EXOSC3-207ENST00000490516 RPL8P62917 257 aaKnown RBP9.66□□□□□ -0.86
EXOSC3-207ENST00000490516 KCTD9Q7L273 389 aa9.66□□□□□ -0.86
EXOSC3-207ENST00000490516 LILRB2Q8N423 598 aa9.66□□□□□ -0.86
EXOSC3-207ENST00000490516 UBAC2Q8NBM4 344 aa9.66□□□□□ -0.86
EXOSC3-207ENST00000490516 DERL3Q96Q80 235 aa9.66□□□□□ -0.86
EXOSC3-207ENST00000490516 CABLES2Q9BTV7 478 aa9.66□□□□□ -0.86
EXOSC3-207ENST00000490516 BABAM2Q9NXR7 383 aa9.66□□□□□ -0.86
EXOSC3-207ENST00000490516 OAZ3Q9UMX2 235 aa9.66□□□□□ -0.86
EXOSC3-207ENST00000490516 J3QRK9 145 aa9.65□□□□□ -0.86
EXOSC3-207ENST00000490516 HLA-GP17693 338 aa9.65□□□□□ -0.86
EXOSC3-207ENST00000490516 CALB2P22676 271 aa9.65□□□□□ -0.86
EXOSC3-207ENST00000490516 OR2B8PP59922 312 aa9.65□□□□□ -0.86
EXOSC3-207ENST00000490516 QRFPP83859 136 aa9.65□□□□□ -0.86
EXOSC3-207ENST00000490516 ZIK1Q3SY52 487 aaPredicted RBP9.65□□□□□ -0.86
EXOSC3-207ENST00000490516 ZNF503Q96F45 646 aa9.65□□□□□ -0.86
EXOSC3-207ENST00000490516 LPAR5Q9H1C0 372 aa9.65□□□□□ -0.86
EXOSC3-207ENST00000490516 C21orf62Q9NYP8 219 aa9.65□□□□□ -0.86
EXOSC3-207ENST00000490516 POMPQ9Y244 141 aa9.65□□□□□ -0.86
EXOSC3-207ENST00000490516 PRELID3BQ9Y3B1 194 aa9.65□□□□□ -0.86
EXOSC3-207ENST00000490516 TRAV14DV4A0A0A6YYC5 116 aa9.64□□□□□ -0.87
EXOSC3-207ENST00000490516 FOXI3A8MTJ6 420 aaPredicted RBP9.64□□□□□ -0.87
EXOSC3-207ENST00000490516 TMEM14DPA8MWL7 114 aa9.64□□□□□ -0.87
EXOSC3-207ENST00000490516 YIF1AO95070 293 aa9.64□□□□□ -0.87
EXOSC3-207ENST00000490516 TMEM50BP56557 158 aa9.64□□□□□ -0.87
EXOSC3-207ENST00000490516 SERTAD4-AS1Q5TG53 156 aa9.64□□□□□ -0.87
EXOSC3-207ENST00000490516 UBE2UQ5VVX9 321 aa9.64□□□□□ -0.87
EXOSC3-207ENST00000490516 TMPRSS11AQ6ZMR5 421 aa9.64□□□□□ -0.87
EXOSC3-207ENST00000490516 MFSD4AQ8N468 514 aa9.64□□□□□ -0.87
EXOSC3-207ENST00000490516 SCARB1Q8WTV0 552 aa9.64□□□□□ -0.87
EXOSC3-207ENST00000490516 MAFIPQ8WZ33 124 aa9.64□□□□□ -0.87
EXOSC3-207ENST00000490516 ST8SIA2Q92186 375 aa9.64□□□□□ -0.87
EXOSC3-207ENST00000490516 ARHGAP5-AS1Q96IT6 56 aa9.64□□□□□ -0.87
EXOSC3-207ENST00000490516 OR10C1Q96KK4 312 aa9.64□□□□□ -0.87
EXOSC3-207ENST00000490516 C17orf77Q96MU5 243 aa9.64□□□□□ -0.87
EXOSC3-207ENST00000490516 PECRQ9BY49 303 aa9.64□□□□□ -0.87
EXOSC3-207ENST00000490516 RABAC1Q9UI14 185 aa9.64□□□□□ -0.87
EXOSC3-207ENST00000490516 HSF4Q9ULV5 492 aa9.64□□□□□ -0.87
EXOSC3-207ENST00000490516 MRPS7Q9Y2R9 242 aaKnown RBP9.64□□□□□ -0.87
EXOSC3-207ENST00000490516 IGHV3-66A0A0C4DH42 116 aa9.63□□□□□ -0.87
EXOSC3-207ENST00000490516 PNMA8CA0A1B0GUJ8 204 aa9.63□□□□□ -0.87
EXOSC3-207ENST00000490516 SAC3D1A6NKF1 404 aa9.63□□□□□ -0.87
EXOSC3-207ENST00000490516 ST8SIA3O43173 380 aa9.63□□□□□ -0.87
EXOSC3-207ENST00000490516 APOHP02749 345 aaPredicted RBP9.63□□□□□ -0.87
EXOSC3-207ENST00000490516 CTSGP08311 255 aa9.63□□□□□ -0.87
EXOSC3-207ENST00000490516 BRWD1-AS2P59051 145 aa9.63□□□□□ -0.87
EXOSC3-207ENST00000490516 RPL11P62913 178 aaKnown RBP9.63□□□□□ -0.87
EXOSC3-207ENST00000490516 DLK1P80370 383 aa9.63□□□□□ -0.87
EXOSC3-207ENST00000490516 Q56UQ5 140 aa9.63□□□□□ -0.87
EXOSC3-207ENST00000490516 ACTL10Q5JWF8 245 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms