RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 TAS2R31P59538 309 aa16.6■□□□□ 0.25
LIME1-203ENST00000465591 C15orf32Q32M92 178 aa16.6■□□□□ 0.25
LIME1-203ENST00000465591 NECAP1Q8NC96 275 aa16.6■□□□□ 0.25
LIME1-203ENST00000465591 HRASLSQ9HDD0 168 aa16.6■□□□□ 0.25
LIME1-203ENST00000465591 DMRT1Q9Y5R6 373 aa16.6■□□□□ 0.25
LIME1-203ENST00000465591 TENM3Q9P273 2699 aa16.59■□□□□ 0.25
LIME1-203ENST00000465591 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.59■□□□□ 0.25
LIME1-203ENST00000465591 UPK2O00526 184 aa16.59■□□□□ 0.25
LIME1-203ENST00000465591 PGLYRP1O75594 196 aaPredicted RBP16.59■□□□□ 0.25
LIME1-203ENST00000465591 REG1AP05451 166 aa16.59■□□□□ 0.25
LIME1-203ENST00000465591 CRYGCP07315 174 aa16.59■□□□□ 0.25
LIME1-203ENST00000465591 CSN3P07498 182 aa16.59■□□□□ 0.25
LIME1-203ENST00000465591 NQO2P16083 231 aa16.59■□□□□ 0.25
LIME1-203ENST00000465591 OR2B8PP59922 312 aa16.59■□□□□ 0.25
LIME1-203ENST00000465591 RPEL1Q2QD12 228 aa16.59■□□□□ 0.25
LIME1-203ENST00000465591 SLC25A42Q86VD7 318 aa16.59■□□□□ 0.25
LIME1-203ENST00000465591 OR4A5Q8NH83 315 aa16.59■□□□□ 0.25
LIME1-203ENST00000465591 TMEM140Q9NV12 185 aa16.59■□□□□ 0.25
LIME1-203ENST00000465591 NDUFB8O95169 186 aa16.58■□□□□ 0.24
LIME1-203ENST00000465591 NHLRC4P0CG21 123 aaPredicted RBP16.58■□□□□ 0.24
LIME1-203ENST00000465591 CTRB1P17538 263 aa16.58■□□□□ 0.24
LIME1-203ENST00000465591 PSMB6P28072 239 aa16.58■□□□□ 0.24
LIME1-203ENST00000465591 CTRB2Q6GPI1 263 aa16.58■□□□□ 0.24
LIME1-203ENST00000465591 PLEKHA2Q9HB19 425 aa16.58■□□□□ 0.24
LIME1-203ENST00000465591 SCPEP1Q9HB40 452 aa16.58■□□□□ 0.24
LIME1-203ENST00000465591 FBXL7Q9UJT9 491 aa16.58■□□□□ 0.24
LIME1-203ENST00000465591 S4R3C0 116 aa16.58■□□□□ 0.24
LIME1-203ENST00000465591 DPPA5A6NC42 116 aa16.57■□□□□ 0.24
LIME1-203ENST00000465591 FAM25AB3EWG3 89 aa16.57■□□□□ 0.24
LIME1-203ENST00000465591 FAM25CB3EWG5 89 aa16.57■□□□□ 0.24
LIME1-203ENST00000465591 FAM25GB3EWG6 89 aa16.57■□□□□ 0.24
LIME1-203ENST00000465591 PPP5D1E7EU14 171 aa16.57■□□□□ 0.24
LIME1-203ENST00000465591 RGS5O15539 181 aa16.57■□□□□ 0.24
LIME1-203ENST00000465591 IGHV3-23P01764 117 aa16.57■□□□□ 0.24
LIME1-203ENST00000465591 KLK9Q2XQG4 91 aa16.57■□□□□ 0.24
LIME1-203ENST00000465591 Q8N1Y9 231 aa16.57■□□□□ 0.24
LIME1-203ENST00000465591 OR6F1Q8NGZ6 308 aa16.57■□□□□ 0.24
LIME1-203ENST00000465591 DGCR14Q96DF8 476 aaKnown RBP16.57■□□□□ 0.24
LIME1-203ENST00000465591 KLK9Q9UKQ9 250 aa16.57■□□□□ 0.24
LIME1-203ENST00000465591 IGLC7A0M8Q6 106 aa16.56■□□□□ 0.24
LIME1-203ENST00000465591 HLA-AP01891 365 aaKnown RBP16.56■□□□□ 0.24
LIME1-203ENST00000465591 F2RP25116 425 aa16.56■□□□□ 0.24
LIME1-203ENST00000465591 ZNF585BQ52M93 769 aa16.56■□□□□ 0.24
LIME1-203ENST00000465591 RNASE12Q5GAN4 147 aaKnown RBP16.56■□□□□ 0.24
LIME1-203ENST00000465591 ADAMTSL5Q6ZMM2 481 aa16.56■□□□□ 0.24
LIME1-203ENST00000465591 SBSPONQ8IVN8 264 aa16.56■□□□□ 0.24
LIME1-203ENST00000465591 CD300LFQ8TDQ1 290 aa16.56■□□□□ 0.24
LIME1-203ENST00000465591 FCAMRQ8WWV6 532 aa16.56■□□□□ 0.24
LIME1-203ENST00000465591 BORCS5Q969J3 196 aa16.56■□□□□ 0.24
LIME1-203ENST00000465591 CCDC140Q96MF4 163 aa16.56■□□□□ 0.24
LIME1-203ENST00000465591 AIFM2Q9BRQ8 373 aa16.56■□□□□ 0.24
LIME1-203ENST00000465591 COMMD9Q9P000 198 aa16.56■□□□□ 0.24
LIME1-203ENST00000465591 U3KQK5 164 aa16.56■□□□□ 0.24
LIME1-203ENST00000465591 GPR31O00270 319 aa16.55■□□□□ 0.24
LIME1-203ENST00000465591 FRMD6-AS1P0C7T7 363 aa16.55■□□□□ 0.24
LIME1-203ENST00000465591 EDN2P20800 178 aa16.55■□□□□ 0.24
LIME1-203ENST00000465591 LPAR6P43657 344 aa16.55■□□□□ 0.24
LIME1-203ENST00000465591 PHLDA2Q53GA4 152 aa16.55■□□□□ 0.24
LIME1-203ENST00000465591 DMBX1Q8NFW5 382 aa16.55■□□□□ 0.24
LIME1-203ENST00000465591 IGLV11-55A0A075B6I3 123 aa16.54■□□□□ 0.24
LIME1-203ENST00000465591 IZUMO1RA6ND01 250 aa16.54■□□□□ 0.24
LIME1-203ENST00000465591 RCVRNP35243 200 aa16.54■□□□□ 0.24
LIME1-203ENST00000465591 OR10W1Q8NGF6 305 aa16.54■□□□□ 0.24
LIME1-203ENST00000465591 MCFD2Q8NI22 146 aa16.54■□□□□ 0.24
LIME1-203ENST00000465591 WWC2-AS2Q96NR7 200 aa16.54■□□□□ 0.24
LIME1-203ENST00000465591 SLIRPQ9GZT3 109 aaKnown RBP16.54■□□□□ 0.24
LIME1-203ENST00000465591 SIGLEC8Q9NYZ4 499 aa16.54■□□□□ 0.24
LIME1-203ENST00000465591 MFSD2BA6NFX1 497 aa16.53■□□□□ 0.24
LIME1-203ENST00000465591 MARCH11A6NNE9 402 aa16.53■□□□□ 0.24
LIME1-203ENST00000465591 M0QYG6 137 aa16.53■□□□□ 0.24
LIME1-203ENST00000465591 MECP2P51608 486 aaKnown RBP16.53■□□□□ 0.24
LIME1-203ENST00000465591 TSPAN5P62079 268 aa16.53■□□□□ 0.24
LIME1-203ENST00000465591 TATDN3Q17R31 274 aa16.53■□□□□ 0.24
LIME1-203ENST00000465591 C15orf40Q8WUR7 153 aa16.53■□□□□ 0.24
LIME1-203ENST00000465591 THAP7Q9BT49 309 aaPredicted RBP16.53■□□□□ 0.24
LIME1-203ENST00000465591 COMMD5Q9GZQ3 224 aa16.53■□□□□ 0.24
LIME1-203ENST00000465591 C6orf62Q9GZU0 229 aaPredicted RBP16.53■□□□□ 0.24
LIME1-203ENST00000465591 KLK11Q9UBX7 282 aa16.53■□□□□ 0.24
LIME1-203ENST00000465591 NSG2Q9Y328 171 aa16.53■□□□□ 0.24
LIME1-203ENST00000465591 TEX50A0A1B0GTY4 177 aa16.52■□□□□ 0.24
LIME1-203ENST00000465591 CTDSP2O14595 271 aa16.52■□□□□ 0.24
LIME1-203ENST00000465591 TPPPO94811 219 aa16.52■□□□□ 0.24
LIME1-203ENST00000465591 OR2C1O95371 312 aa16.52■□□□□ 0.24
LIME1-203ENST00000465591 KRASP01116 189 aa16.52■□□□□ 0.24
LIME1-203ENST00000465591 G6PCP35575 357 aa16.52■□□□□ 0.24
LIME1-203ENST00000465591 CLEC19AQ6UXS0 136 aa16.52■□□□□ 0.24
LIME1-203ENST00000465591 CMTM1Q8IZ96 169 aa16.52■□□□□ 0.24
LIME1-203ENST00000465591 OR52I2Q8NH67 350 aa16.52■□□□□ 0.24
LIME1-203ENST00000465591 ABHD1Q96SE0 405 aa16.52■□□□□ 0.24
LIME1-203ENST00000465591 MIXL1Q9H2W2 232 aa16.52■□□□□ 0.24
LIME1-203ENST00000465591 EXTL2Q9UBQ6 330 aa16.52■□□□□ 0.24
LIME1-203ENST00000465591 KMT2CQ8NEZ4 4911 aaKnown RBP16.52■□□□□ 0.23
LIME1-203ENST00000465591 QTRT1Q9BXR0 403 aaKnown RBP16.51■□□□□ 0.23
LIME1-203ENST00000465591 NXF2Q9GZY0 626 aaKnown RBP16.51■□□□□ 0.23
LIME1-203ENST00000465591 GGCTO75223 188 aaKnown RBP16.5■□□□□ 0.23
LIME1-203ENST00000465591 DHFRP00374 187 aa16.5■□□□□ 0.23
LIME1-203ENST00000465591 FGF2P09038 288 aa16.5■□□□□ 0.23
LIME1-203ENST00000465591 IGHV4-30-4P0DP06 118 aa16.5■□□□□ 0.23
LIME1-203ENST00000465591 DEFA4P12838 97 aa16.5■□□□□ 0.23
LIME1-203ENST00000465591 HIST1H1BP16401 226 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms