RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 DEFA4P12838 97 aa8.6□□□□□ -1.03
HCFC1-204ENST00000461098 PSMD7P51665 324 aa8.6□□□□□ -1.03
HCFC1-204ENST00000461098 CLDN12P56749 244 aa8.6□□□□□ -1.03
HCFC1-204ENST00000461098 OR2B8PP59922 312 aa8.6□□□□□ -1.03
HCFC1-204ENST00000461098 C2orf76Q3KRA6 126 aa8.6□□□□□ -1.03
HCFC1-204ENST00000461098 HSD17B12Q53GQ0 312 aa8.6□□□□□ -1.03
HCFC1-204ENST00000461098 Q6ZS49 121 aa8.6□□□□□ -1.03
HCFC1-204ENST00000461098 Q6ZTC4 211 aa8.6□□□□□ -1.03
HCFC1-204ENST00000461098 ZNF555Q8NEP9 628 aa8.6□□□□□ -1.03
HCFC1-204ENST00000461098 OR4A5Q8NH83 315 aa8.6□□□□□ -1.03
HCFC1-204ENST00000461098 VSTM2AQ8TAG5 236 aa8.6□□□□□ -1.03
HCFC1-204ENST00000461098 RNF2Q99496 336 aa8.6□□□□□ -1.03
HCFC1-204ENST00000461098 GINS4Q9BRT9 223 aa8.6□□□□□ -1.03
HCFC1-204ENST00000461098 CHRDL1Q9BU40 450 aa8.6□□□□□ -1.03
HCFC1-204ENST00000461098 SMPD3Q9NY59 655 aaPredicted RBP8.6□□□□□ -1.03
HCFC1-204ENST00000461098 PSORS1C1Q9UIG5 152 aa8.6□□□□□ -1.03
HCFC1-204ENST00000461098 RBMX2Q9Y388 322 aaKnown RBP8.6□□□□□ -1.03
HCFC1-204ENST00000461098 IGKV1D-13A0A0B4J2D9 117 aa8.59□□□□□ -1.03
HCFC1-204ENST00000461098 OR2T8A6NH00 312 aa8.59□□□□□ -1.03
HCFC1-204ENST00000461098 K7EMT4 169 aa8.59□□□□□ -1.03
HCFC1-204ENST00000461098 M0R2N4 97 aa8.59□□□□□ -1.03
HCFC1-204ENST00000461098 RAB27BO00194 218 aa8.59□□□□□ -1.03
HCFC1-204ENST00000461098 MFNGO00587 321 aa8.59□□□□□ -1.03
HCFC1-204ENST00000461098 MYL12BO14950 172 aa8.59□□□□□ -1.03
HCFC1-204ENST00000461098 ZNF207O43670 478 aaKnown RBP8.59□□□□□ -1.03
HCFC1-204ENST00000461098 HLA-DQB1P01920 261 aa8.59□□□□□ -1.03
HCFC1-204ENST00000461098 GIG44P09565 113 aaPredicted RBP8.59□□□□□ -1.03
HCFC1-204ENST00000461098 IGKV1-13P0DP09 117 aa8.59□□□□□ -1.03
HCFC1-204ENST00000461098 HLA-DMBP28068 263 aa8.59□□□□□ -1.03
HCFC1-204ENST00000461098 RPL8P62917 257 aaKnown RBP8.59□□□□□ -1.03
HCFC1-204ENST00000461098 TMEM91Q6ZNR0 172 aa8.59□□□□□ -1.03
HCFC1-204ENST00000461098 POM121L12Q8N7R1 296 aa8.59□□□□□ -1.03
HCFC1-204ENST00000461098 FAM3DQ96BQ1 224 aa8.59□□□□□ -1.03
HCFC1-204ENST00000461098 C6orf62Q9GZU0 229 aaPredicted RBP8.59□□□□□ -1.03
HCFC1-204ENST00000461098 PLGRKTQ9HBL7 147 aa8.59□□□□□ -1.03
HCFC1-204ENST00000461098 PRELID3BQ9Y3B1 194 aa8.59□□□□□ -1.03
HCFC1-204ENST00000461098 AK6Q9Y3D8 172 aaKnown RBP8.59□□□□□ -1.03
HCFC1-204ENST00000461098 TMEM272A0A1B0GTI8 110 aa8.58□□□□□ -1.04
HCFC1-204ENST00000461098 NDUFA4O00483 81 aa8.58□□□□□ -1.04
HCFC1-204ENST00000461098 DENRO43583 198 aaKnown RBP8.58□□□□□ -1.04
HCFC1-204ENST00000461098 ATP5HO75947 161 aa8.58□□□□□ -1.04
HCFC1-204ENST00000461098 CA1P00915 261 aaPredicted RBP8.58□□□□□ -1.04
HCFC1-204ENST00000461098 GNB3P16520 340 aa8.58□□□□□ -1.04
HCFC1-204ENST00000461098 HLA-GP17693 338 aa8.58□□□□□ -1.04
HCFC1-204ENST00000461098 CRHBPP24387 322 aa8.58□□□□□ -1.04
HCFC1-204ENST00000461098 TMEM187Q14656 261 aa8.58□□□□□ -1.04
HCFC1-204ENST00000461098 RAB11BQ15907 218 aa8.58□□□□□ -1.04
HCFC1-204ENST00000461098 LGALS9BQ3B8N2 356 aa8.58□□□□□ -1.04
HCFC1-204ENST00000461098 FAM90A2PQ658T7 463 aa8.58□□□□□ -1.04
HCFC1-204ENST00000461098 PVRIGQ6DKI7 326 aa8.58□□□□□ -1.04
HCFC1-204ENST00000461098 OR4S2Q8NH73 311 aa8.58□□□□□ -1.04
HCFC1-204ENST00000461098 VN1R17PQ8TDU5 208 aa8.58□□□□□ -1.04
HCFC1-204ENST00000461098 RAB3CQ96E17 227 aa8.58□□□□□ -1.04
HCFC1-204ENST00000461098 GPHA2Q96T91 129 aa8.58□□□□□ -1.04
HCFC1-204ENST00000461098 FKBP14Q9NWM8 211 aa8.58□□□□□ -1.04
HCFC1-204ENST00000461098 SMPXQ9UHP9 88 aa8.58□□□□□ -1.04
HCFC1-204ENST00000461098 ELF5Q9UKW6 265 aaPredicted RBP8.58□□□□□ -1.04
HCFC1-204ENST00000461098 MRPS7Q9Y2R9 242 aaKnown RBP8.58□□□□□ -1.04
HCFC1-204ENST00000461098 OR2W1Q9Y3N9 320 aa8.58□□□□□ -1.04
HCFC1-204ENST00000461098 DNAH5Q8TE73 4624 aa8.57□□□□□ -1.04
HCFC1-204ENST00000461098 ELOA3CA0A087WX78 387 aaPredicted RBP8.57□□□□□ -1.04
HCFC1-204ENST00000461098 TRAV10A0A0B4J240 114 aa8.57□□□□□ -1.04
HCFC1-204ENST00000461098 TRAV3A0A0B4J244 114 aa8.57□□□□□ -1.04
HCFC1-204ENST00000461098 IGHV4-28A0A0C4DH34 117 aa8.57□□□□□ -1.04
HCFC1-204ENST00000461098 C15orf61A6NNL5 157 aa8.57□□□□□ -1.04
HCFC1-204ENST00000461098 CHEK1O14757 476 aa8.57□□□□□ -1.04
HCFC1-204ENST00000461098 NFYAP23511 347 aaPredicted RBP8.57□□□□□ -1.04
HCFC1-204ENST00000461098 MRPS15P82914 257 aaKnown RBP8.57□□□□□ -1.04
HCFC1-204ENST00000461098 Q6ZR54 194 aa8.57□□□□□ -1.04
HCFC1-204ENST00000461098 AHSA2Q719I0 299 aa8.57□□□□□ -1.04
HCFC1-204ENST00000461098 MFSD4AQ8N468 514 aa8.57□□□□□ -1.04
HCFC1-204ENST00000461098 BSCL2Q96G97 398 aaPredicted RBP8.57□□□□□ -1.04
HCFC1-204ENST00000461098 C20orf24Q9BUV8 137 aa8.57□□□□□ -1.04
HCFC1-204ENST00000461098 RNF126Q9BV68 326 aa8.57□□□□□ -1.04
HCFC1-204ENST00000461098 SCRT1Q9BWW7 348 aa8.57□□□□□ -1.04
HCFC1-204ENST00000461098 BET1LQ9NYM9 111 aa8.57□□□□□ -1.04
HCFC1-204ENST00000461098 SPATA2Q9UM82 520 aa8.57□□□□□ -1.04
HCFC1-204ENST00000461098 LSM2Q9Y333 95 aaKnown RBP8.57□□□□□ -1.04
HCFC1-204ENST00000461098 C15orf62A8K5M9 175 aa8.56□□□□□ -1.04
HCFC1-204ENST00000461098 AMBPP02760 352 aa8.56□□□□□ -1.04
HCFC1-204ENST00000461098 HIST1H1DP16402 221 aaKnown RBP8.56□□□□□ -1.04
HCFC1-204ENST00000461098 CD36P16671 472 aa8.56□□□□□ -1.04
HCFC1-204ENST00000461098 TFPI2P48307 235 aa8.56□□□□□ -1.04
HCFC1-204ENST00000461098 CMC4P56277 68 aaPredicted RBP8.56□□□□□ -1.04
HCFC1-204ENST00000461098 TIMM50Q3ZCQ8 353 aa8.56□□□□□ -1.04
HCFC1-204ENST00000461098 NR2C2APQ86WQ0 139 aa8.56□□□□□ -1.04
HCFC1-204ENST00000461098 PQLC1Q8N2U9 271 aa8.56□□□□□ -1.04
HCFC1-204ENST00000461098 OR10W1Q8NGF6 305 aa8.56□□□□□ -1.04
HCFC1-204ENST00000461098 OR10R2Q8NGX6 335 aa8.56□□□□□ -1.04
HCFC1-204ENST00000461098 TCTEX1D2Q8WW35 142 aa8.56□□□□□ -1.04
HCFC1-204ENST00000461098 CYGBQ8WWM9 190 aa8.56□□□□□ -1.04
HCFC1-204ENST00000461098 HSD17B10Q99714 261 aaKnown RBP8.56□□□□□ -1.04
HCFC1-204ENST00000461098 RHPN1-AS1Q9BWJ2 59 aa8.56□□□□□ -1.04
HCFC1-204ENST00000461098 S100A14Q9HCY8 104 aa8.56□□□□□ -1.04
HCFC1-204ENST00000461098 PLCXD1Q9NUJ7 323 aa8.56□□□□□ -1.04
HCFC1-204ENST00000461098 THYN1Q9P016 225 aa8.56□□□□□ -1.04
HCFC1-204ENST00000461098 RAB22AQ9UL26 194 aa8.56□□□□□ -1.04
HCFC1-204ENST00000461098 X6R8D5 127 aa8.56□□□□□ -1.04
HCFC1-204ENST00000461098 IGHV3-21A0A0B4J1V1 117 aa8.55□□□□□ -1.04
HCFC1-204ENST00000461098 IGHV7-4-1A0A0J9YVY3 117 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms