RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 IGHV4-4A0A075B6R2 117 aa12.49□□□□□ -0.41
UBE2D4-209ENST00000454428 IGHV3OR16-8A0A075B7F1 116 aa12.49□□□□□ -0.41
UBE2D4-209ENST00000454428 IGLC7A0M8Q6 106 aa12.49□□□□□ -0.41
UBE2D4-209ENST00000454428 RAB27BO00194 218 aa12.49□□□□□ -0.41
UBE2D4-209ENST00000454428 MYL12BO14950 172 aa12.49□□□□□ -0.41
UBE2D4-209ENST00000454428 ATP5HO75947 161 aa12.49□□□□□ -0.41
UBE2D4-209ENST00000454428 DEFA4P12838 97 aa12.49□□□□□ -0.41
UBE2D4-209ENST00000454428 OR4A5Q8NH83 315 aa12.49□□□□□ -0.41
UBE2D4-209ENST00000454428 VSTM2AQ8TAG5 236 aa12.49□□□□□ -0.41
UBE2D4-209ENST00000454428 C6orf62Q9GZU0 229 aaPredicted RBP12.49□□□□□ -0.41
UBE2D4-209ENST00000454428 PLA2G2EQ9NZK7 142 aa12.49□□□□□ -0.41
UBE2D4-209ENST00000454428 PSORS1C1Q9UIG5 152 aa12.49□□□□□ -0.41
UBE2D4-209ENST00000454428 AK6Q9Y3D8 172 aaKnown RBP12.49□□□□□ -0.41
UBE2D4-209ENST00000454428 IGKV1D-13A0A0B4J2D9 117 aa12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 OR2T8A6NH00 312 aa12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 F8W735 103 aaPredicted RBP12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 MFNGO00587 321 aa12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 ZNF207O43670 478 aaKnown RBP12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 RBMY1A1P0DJD3 496 aaKnown RBP12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 RBMY1CP0DJD4 496 aa12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 IGKV1-13P0DP09 117 aa12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 GNB3P16520 340 aa12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 HLA-GP17693 338 aa12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 OR2B8PP59922 312 aa12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 RPL8P62917 257 aaKnown RBP12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 RBMY1FQ15415 496 aaKnown RBP12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 RAB11BQ15907 218 aa12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 C2orf76Q3KRA6 126 aa12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 Q6ZS49 121 aa12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 Q6ZTC4 211 aa12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 FAM3DQ96BQ1 224 aa12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 RAB3CQ96E17 227 aa12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 RNF2Q99496 336 aa12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 CHRDL1Q9BU40 450 aa12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 MRPS7Q9Y2R9 242 aaKnown RBP12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 PRELID3BQ9Y3B1 194 aa12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 ETV7Q9Y603 341 aa12.48□□□□□ -0.41
UBE2D4-209ENST00000454428 TMEM272A0A1B0GTI8 110 aa12.47□□□□□ -0.41
UBE2D4-209ENST00000454428 M0R2N4 97 aa12.47□□□□□ -0.41
UBE2D4-209ENST00000454428 DENRO43583 198 aaKnown RBP12.47□□□□□ -0.41
UBE2D4-209ENST00000454428 CA1P00915 261 aaPredicted RBP12.47□□□□□ -0.41
UBE2D4-209ENST00000454428 HLA-DQB1P01920 261 aa12.47□□□□□ -0.41
UBE2D4-209ENST00000454428 CRHBPP24387 322 aa12.47□□□□□ -0.41
UBE2D4-209ENST00000454428 HLA-DMBP28068 263 aa12.47□□□□□ -0.41
UBE2D4-209ENST00000454428 TMEM91Q6ZNR0 172 aa12.47□□□□□ -0.41
UBE2D4-209ENST00000454428 AHSA2Q719I0 299 aa12.47□□□□□ -0.41
UBE2D4-209ENST00000454428 PQLC1Q8N2U9 271 aa12.47□□□□□ -0.41
UBE2D4-209ENST00000454428 OR4S2Q8NH73 311 aa12.47□□□□□ -0.41
UBE2D4-209ENST00000454428 K7EMT4 169 aa12.46□□□□□ -0.41
UBE2D4-209ENST00000454428 NDUFA4O00483 81 aa12.46□□□□□ -0.41
UBE2D4-209ENST00000454428 MRPS15P82914 257 aaKnown RBP12.46□□□□□ -0.41
UBE2D4-209ENST00000454428 TMEM187Q14656 261 aa12.46□□□□□ -0.41
UBE2D4-209ENST00000454428 POM121L12Q8N7R1 296 aa12.46□□□□□ -0.41
UBE2D4-209ENST00000454428 VN1R17PQ8TDU5 208 aa12.46□□□□□ -0.41
UBE2D4-209ENST00000454428 GPHA2Q96T91 129 aa12.46□□□□□ -0.41
UBE2D4-209ENST00000454428 FKBP14Q9NWM8 211 aa12.46□□□□□ -0.41
UBE2D4-209ENST00000454428 ELF5Q9UKW6 265 aaPredicted RBP12.46□□□□□ -0.41
UBE2D4-209ENST00000454428 LSM2Q9Y333 95 aaKnown RBP12.46□□□□□ -0.41
UBE2D4-209ENST00000454428 TRAV3A0A0B4J244 114 aa12.45□□□□□ -0.42
UBE2D4-209ENST00000454428 GIG44P09565 113 aaPredicted RBP12.45□□□□□ -0.42
UBE2D4-209ENST00000454428 NFYAP23511 347 aaPredicted RBP12.45□□□□□ -0.42
UBE2D4-209ENST00000454428 TFPI2P48307 235 aa12.45□□□□□ -0.42
UBE2D4-209ENST00000454428 PVRIGQ6DKI7 326 aa12.45□□□□□ -0.42
UBE2D4-209ENST00000454428 TCTEX1D2Q8WW35 142 aa12.45□□□□□ -0.42
UBE2D4-209ENST00000454428 CYGBQ8WWM9 190 aa12.45□□□□□ -0.42
UBE2D4-209ENST00000454428 BSCL2Q96G97 398 aaPredicted RBP12.45□□□□□ -0.42
UBE2D4-209ENST00000454428 C20orf24Q9BUV8 137 aa12.45□□□□□ -0.42
UBE2D4-209ENST00000454428 S100A14Q9HCY8 104 aa12.45□□□□□ -0.42
UBE2D4-209ENST00000454428 SMPXQ9UHP9 88 aa12.45□□□□□ -0.42
UBE2D4-209ENST00000454428 OR2W1Q9Y3N9 320 aa12.45□□□□□ -0.42
UBE2D4-209ENST00000454428 A0A075B6Q4 140 aa12.44□□□□□ -0.42
UBE2D4-209ENST00000454428 TRAV10A0A0B4J240 114 aa12.44□□□□□ -0.42
UBE2D4-209ENST00000454428 IGHV4-28A0A0C4DH34 117 aa12.44□□□□□ -0.42
UBE2D4-209ENST00000454428 HIST1H1DP16402 221 aaKnown RBP12.44□□□□□ -0.42
UBE2D4-209ENST00000454428 CD36P16671 472 aa12.44□□□□□ -0.42
UBE2D4-209ENST00000454428 TIMM50Q3ZCQ8 353 aa12.44□□□□□ -0.42
UBE2D4-209ENST00000454428 FAM90A2PQ658T7 463 aa12.44□□□□□ -0.42
UBE2D4-209ENST00000454428 OR10W1Q8NGF6 305 aa12.44□□□□□ -0.42
UBE2D4-209ENST00000454428 OR10R2Q8NGX6 335 aa12.44□□□□□ -0.42
UBE2D4-209ENST00000454428 TMEM203Q969S6 136 aa12.44□□□□□ -0.42
UBE2D4-209ENST00000454428 RNF126Q9BV68 326 aa12.44□□□□□ -0.42
UBE2D4-209ENST00000454428 PLCXD1Q9NUJ7 323 aa12.44□□□□□ -0.42
UBE2D4-209ENST00000454428 BET1LQ9NYM9 111 aa12.44□□□□□ -0.42
UBE2D4-209ENST00000454428 RAB22AQ9UL26 194 aa12.44□□□□□ -0.42
UBE2D4-209ENST00000454428 SPATA2Q9UM82 520 aa12.44□□□□□ -0.42
UBE2D4-209ENST00000454428 ELOA3CA0A087WX78 387 aaPredicted RBP12.43□□□□□ -0.42
UBE2D4-209ENST00000454428 C15orf61A6NNL5 157 aa12.43□□□□□ -0.42
UBE2D4-209ENST00000454428 CHEK1O14757 476 aa12.43□□□□□ -0.42
UBE2D4-209ENST00000454428 GNAO1P09471 354 aa12.43□□□□□ -0.42
UBE2D4-209ENST00000454428 LGALS9BQ3B8N2 356 aa12.43□□□□□ -0.42
UBE2D4-209ENST00000454428 MFSD4AQ8N468 514 aa12.43□□□□□ -0.42
UBE2D4-209ENST00000454428 HSD17B10Q99714 261 aaKnown RBP12.43□□□□□ -0.42
UBE2D4-209ENST00000454428 SCRT1Q9BWW7 348 aa12.43□□□□□ -0.42
UBE2D4-209ENST00000454428 TAS2R8Q9NYW2 309 aa12.43□□□□□ -0.42
UBE2D4-209ENST00000454428 IGKV3-7A0A075B6H7 116 aa12.42□□□□□ -0.42
UBE2D4-209ENST00000454428 IGHV3-21A0A0B4J1V1 117 aa12.42□□□□□ -0.42
UBE2D4-209ENST00000454428 IGHV7-4-1A0A0J9YVY3 117 aa12.42□□□□□ -0.42
UBE2D4-209ENST00000454428 C15orf62A8K5M9 175 aa12.42□□□□□ -0.42
UBE2D4-209ENST00000454428 AMBPP02760 352 aa12.42□□□□□ -0.42
UBE2D4-209ENST00000454428 SPSB3Q6PJ21 355 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms