RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ZNF799Q96GE5 643 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 NIPSNAP1Q9BPW8 284 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 NRIP2Q9BQI9 281 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 VPS25Q9BRG1 176 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 CCDC32Q9BV29 185 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 TPPP3Q9BW30 176 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 FUNDC2Q9BWH2 189 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 SRRQ9GZT4 340 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 CACYBPQ9HB71 228 aaKnown RBP3.41□□□□□ -1.86
SDCBP-205ENST00000447267 RCC2Q9P258 522 aaKnown RBP3.41□□□□□ -1.86
SDCBP-205ENST00000447267 SMPXQ9UHP9 88 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 GNG8Q9UK08 70 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 TBC1D24Q9ULP9 559 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 ADAM18Q9Y3Q7 739 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 A3GALT2U3KPV4 340 aa3.41□□□□□ -1.86
SDCBP-205ENST00000447267 hCG_38984A0A1B0GV85 526 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 A0A1W2PPV4 95 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 CPSF4LA6NMK7 179 aaKnown RBP3.4□□□□□ -1.87
SDCBP-205ENST00000447267 ZNF736B4DX44 427 aaPredicted RBP3.4□□□□□ -1.87
SDCBP-205ENST00000447267 PTGES3LE9PB15 166 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 MPZL2O60487 215 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 LALBAP00709 142 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 FUT3P21217 361 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 BLVRBP30043 206 aaPredicted RBP3.4□□□□□ -1.87
SDCBP-205ENST00000447267 IFNGR2P38484 337 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 GLIPR1P48060 266 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 RORCP51449 518 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 TPPP2P59282 170 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 SELENOTP62341 195 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 EDDM3AQ14507 147 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 SURF2Q15527 256 aaPredicted RBP3.4□□□□□ -1.87
SDCBP-205ENST00000447267 PSG3Q16557 428 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 ATP6V1FQ16864 119 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 BSXQ3C1V8 233 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 SCGB2B2Q4G0G5 96 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 ZNF691Q5VV52 312 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 DPY19L2P2Q6ZN68 376 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 SSX7Q7RTT5 188 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 NRARPQ7Z6K4 114 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 MOB3BQ86TA1 216 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 TMEM61Q8N0U2 210 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 DHRSXQ8N5I4 330 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 MS4A15Q8N5U1 240 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 HSD17B11Q8NBQ5 300 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 ZNF114Q8NC26 417 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 RXFP4Q8TDU9 374 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 ZNF431Q8TF32 576 aaPredicted RBP3.4□□□□□ -1.87
SDCBP-205ENST00000447267 CCDC107Q8WV48 283 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 OR5P3Q8WZ94 311 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 SPSB1Q96BD6 273 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 MRPS24Q96EL2 167 aaKnown RBP3.4□□□□□ -1.87
SDCBP-205ENST00000447267 RNF125Q96EQ8 232 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 C5orf30Q96GV9 206 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 PRRC1Q96M27 445 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 NEDD4LQ96PU5 975 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 ABHD1Q96SE0 405 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 MCHR1Q99705 422 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 MICU1Q9BPX6 476 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 RTL8AQ9BWD3 113 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 SNHG12Q9BXW3 62 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 SLIRPQ9GZT3 109 aaKnown RBP3.4□□□□□ -1.87
SDCBP-205ENST00000447267 COMMD4Q9H0A8 199 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 PARP12Q9H0J9 701 aaKnown RBP3.4□□□□□ -1.87
SDCBP-205ENST00000447267 PRO1933Q9H354 126 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 FNDC4Q9H6D8 234 aaPredicted RBP3.4□□□□□ -1.87
SDCBP-205ENST00000447267 OR14J1Q9UGF5 321 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 MRM2Q9UI43 246 aaKnown RBP3.4□□□□□ -1.87
SDCBP-205ENST00000447267 SLC7A7Q9UM01 511 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 ING4Q9UNL4 249 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 PSG11Q9UQ72 335 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 SIGLEC7Q9Y286 467 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 POLR1DQ9Y2S0 133 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 LINC00312Q9Y6C7 94 aa3.4□□□□□ -1.87
SDCBP-205ENST00000447267 A0A0A0MQY5 61 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 PNMA8CA0A1B0GUJ8 204 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 HELTA6NFD8 242 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 A8MWP6 167 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 TEX46H3BTG2 121 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 MYL12BO14950 172 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 CYB5BO43169 146 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 MPC2O95563 127 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 IGLV2-23P01705 113 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 MT-ND1P03886 318 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 SCTP09683 121 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 MYL12AP19105 171 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 CDK2P24941 298 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 S100A2P29034 98 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 ARL3P36405 182 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 POLR2IP36954 125 aaKnown RBP3.39□□□□□ -1.87
SDCBP-205ENST00000447267 ID1P41134 155 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 RBM34P42696 430 aaKnown RBP3.39□□□□□ -1.87
SDCBP-205ENST00000447267 REG1BP48304 166 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 ATP5IP56385 69 aaPredicted RBP3.39□□□□□ -1.87
SDCBP-205ENST00000447267 HERV-K104P63124 156 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 NDPQ00604 133 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 EMX2Q04743 252 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 GAMTQ14353 236 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 RSU1Q15404 277 aa3.39□□□□□ -1.87
SDCBP-205ENST00000447267 SMIM21Q3B7S5 101 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms