RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 C20orf196Q8IYI0 205 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 OR5AS1Q8N127 324 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 INO80EQ8NBZ0 244 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 OR4S1Q8NGB4 309 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 OR13C8Q8NGS7 320 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 OR6K3Q8NGY3 331 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 MITD1Q8WV92 249 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 RBPMSQ93062 196 aaKnown RBP2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 CPNE4Q96A23 557 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 CMBLQ96DG6 245 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 BORCS8Q96FH0 119 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 REEP6Q96HR9 211 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 ARHGAP5-AS1Q96IT6 56 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 DDA1Q9BW61 102 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 NMES1Q9C002 83 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 DNTTIP1Q9H147 329 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 LPAR5Q9H1C0 372 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 RGCCQ9H4X1 137 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 FN3KRPQ9HA64 309 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 SDHAF2Q9NX18 166 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 ANAPC10Q9UM13 185 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 BOKQ9UMX3 212 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 SLC7A11Q9UPY5 501 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 C14orf166Q9Y224 244 aaKnown RBP2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 RHBDD3Q9Y3P4 386 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 F11RQ9Y624 299 aaKnown RBP2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 V9GYS6 101 aa2.75□□□□□ -1.97
HMGB3P6-201ENST00000444896 A0A0B4J2A0 478 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 IGKV1D-13A0A0B4J2D9 117 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 A0A0J9YW62 118 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 OR6C6A6NF89 314 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 OR2AT4A6NND4 320 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 C21orf140B9A014 251 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 EEF1E1-BLOC1S5C9J1V9 151 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 C11orf94C9JXX5 98 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 RRP8O43159 456 aaKnown RBP2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 XRCC2O43543 280 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 KLF7O75840 302 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 TRAPPC6AO75865 159 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 SFT2D2O95562 160 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 CFDP00746 253 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 IGHV2-5P01817 119 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 SERPINA5P05154 406 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 SERPINA7P05543 415 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 CRHP06850 196 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 IGKV1-13P0DP09 117 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 LIPCP11150 499 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 TPT1P13693 172 aaKnown RBP2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 RPS2P15880 293 aaKnown RBP2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 AKR1C4P17516 323 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 HLA-GP17693 338 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 TCN2P20062 427 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 M6PRP20645 277 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 DTYMKP23919 212 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 KRTAP5-9P26371 169 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 BLVRBP30043 206 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 OTX1P32242 354 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 CYB561P49447 251 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 CARD18P57730 90 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 PAX5Q02548 391 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 BAMBIQ13145 260 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 ENDOGQ14249 297 aaKnown RBP2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 SMCO1Q147U7 214 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 RSU1Q15404 277 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 STK11Q15831 433 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 TMEM183BQ1AE95 376 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 TMEM128Q5BJH2 165 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 LY6G6FQ5SQ64 297 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 FAM27BQ5VT28 67 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 OR52W1Q6IF63 320 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 ALKAL2Q6UX46 152 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 Q6ZSR3 168 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 AAED1Q7RTV5 226 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 SLC16A14Q7RTX9 510 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 CAMK2N1Q7Z7J9 78 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 TMEM183AQ8IXX5 376 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 LRRC18Q8N456 261 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 KCNRGQ8N5I3 272 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 TMEM104Q8NE00 496 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 PXT1Q8NFP0 134 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 OR2G3Q8NGZ4 309 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 OR10D3Q8NH80 312 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 TERB2Q8NHR7 220 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 ZNF596Q8TC21 504 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 CASTOR1Q8WTX7 329 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 CT55Q8WUE5 264 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 PPP1R1CQ8WVI7 109 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 IP6K3Q96PC2 410 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 SPACA5Q96QH8 159 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 DHRS9Q9BPW9 319 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 ZNF471Q9BX82 626 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 PECRQ9BY49 303 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 CHST6Q9GZX3 395 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 METTL9Q9H1A3 318 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 BANF2Q9H503 90 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 TMEM38BQ9NVV0 291 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 PLEKHJ1Q9NW61 149 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 SHPKQ9UHJ6 478 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 GLS2Q9UI32 602 aa2.74□□□□□ -1.97
HMGB3P6-201ENST00000444896 ATPIF1Q9UII2 106 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms