RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 AP3S1Q92572 193 aa15.32■□□□□ 0.04
LRCH3-208ENST00000443727 TMEM140Q9NV12 185 aa15.32■□□□□ 0.04
LRCH3-208ENST00000443727 COMMD9Q9P000 198 aa15.32■□□□□ 0.04
LRCH3-208ENST00000443727 A0A1B0GW64 132 aa15.31■□□□□ 0.04
LRCH3-208ENST00000443727 PGLYRP1O75594 196 aaPredicted RBP15.31■□□□□ 0.04
LRCH3-208ENST00000443727 CSN3P07498 182 aa15.31■□□□□ 0.04
LRCH3-208ENST00000443727 FRMD6-AS1P0C7T7 363 aa15.31■□□□□ 0.04
LRCH3-208ENST00000443727 HIST1H1BP16401 226 aaKnown RBP15.31■□□□□ 0.04
LRCH3-208ENST00000443727 ELK1P19419 428 aa15.31■□□□□ 0.04
LRCH3-208ENST00000443727 S100GP29377 79 aa15.31■□□□□ 0.04
LRCH3-208ENST00000443727 POU2AF1Q16633 256 aa15.31■□□□□ 0.04
LRCH3-208ENST00000443727 LYSMD2Q8IV50 215 aa15.31■□□□□ 0.04
LRCH3-208ENST00000443727 TRAV3A0A0B4J244 114 aa15.3■□□□□ 0.04
LRCH3-208ENST00000443727 PPP5D1E7EU14 171 aa15.3■□□□□ 0.04
LRCH3-208ENST00000443727 GPR31O00270 319 aa15.3■□□□□ 0.04
LRCH3-208ENST00000443727 NDUFB8O95169 186 aa15.3■□□□□ 0.04
LRCH3-208ENST00000443727 IGHV3-23P01764 117 aa15.3■□□□□ 0.04
LRCH3-208ENST00000443727 CRYGCP07315 174 aa15.3■□□□□ 0.04
LRCH3-208ENST00000443727 F2RP25116 425 aa15.3■□□□□ 0.04
LRCH3-208ENST00000443727 OR2B8PP59922 312 aa15.3■□□□□ 0.04
LRCH3-208ENST00000443727 LCN12Q6JVE5 192 aa15.3■□□□□ 0.04
LRCH3-208ENST00000443727 SBSPONQ8IVN8 264 aa15.3■□□□□ 0.04
LRCH3-208ENST00000443727 SGPP2Q8IWX5 399 aa15.3■□□□□ 0.04
LRCH3-208ENST00000443727 NAA50Q9GZZ1 169 aaKnown RBP15.3■□□□□ 0.04
LRCH3-208ENST00000443727 FXYD6Q9H0Q3 95 aa15.3■□□□□ 0.04
LRCH3-208ENST00000443727 TENM3Q9P273 2699 aa15.3■□□□□ 0.04
LRCH3-208ENST00000443727 GGCTO75223 188 aaKnown RBP15.29■□□□□ 0.04
LRCH3-208ENST00000443727 SMIM18P0DKX4 95 aa15.29■□□□□ 0.04
LRCH3-208ENST00000443727 CTRB1P17538 263 aa15.29■□□□□ 0.04
LRCH3-208ENST00000443727 RCVRNP35243 200 aa15.29■□□□□ 0.04
LRCH3-208ENST00000443727 LPAR6P43657 344 aa15.29■□□□□ 0.04
LRCH3-208ENST00000443727 GPR107Q5VW38 600 aa15.29■□□□□ 0.04
LRCH3-208ENST00000443727 CTRB2Q6GPI1 263 aa15.29■□□□□ 0.04
LRCH3-208ENST00000443727 LPCAT3Q6P1A2 487 aa15.29■□□□□ 0.04
LRCH3-208ENST00000443727 EEF1AKMT3Q96AZ1 226 aa15.29■□□□□ 0.04
LRCH3-208ENST00000443727 DGCR14Q96DF8 476 aaKnown RBP15.29■□□□□ 0.04
LRCH3-208ENST00000443727 FANCD2OSQ96PS1 177 aa15.29■□□□□ 0.04
LRCH3-208ENST00000443727 QTRT1Q9BXR0 403 aaKnown RBP15.29■□□□□ 0.04
LRCH3-208ENST00000443727 SIGLEC8Q9NYZ4 499 aa15.29■□□□□ 0.04
LRCH3-208ENST00000443727 S4R3C0 116 aa15.29■□□□□ 0.04
LRCH3-208ENST00000443727 MARCH11A6NNE9 402 aa15.28■□□□□ 0.04
LRCH3-208ENST00000443727 GABARAPO95166 117 aa15.28■□□□□ 0.04
LRCH3-208ENST00000443727 OR2C1O95371 312 aa15.28■□□□□ 0.04
LRCH3-208ENST00000443727 KRASP01116 189 aa15.28■□□□□ 0.04
LRCH3-208ENST00000443727 HLA-AP01891 365 aaKnown RBP15.28■□□□□ 0.04
LRCH3-208ENST00000443727 ARL3P36405 182 aa15.28■□□□□ 0.04
LRCH3-208ENST00000443727 CTF1Q16619 201 aa15.28■□□□□ 0.04
LRCH3-208ENST00000443727 PHLDA2Q53GA4 152 aa15.28■□□□□ 0.04
LRCH3-208ENST00000443727 CLEC19AQ6UXS0 136 aa15.28■□□□□ 0.04
LRCH3-208ENST00000443727 GTSCR1Q86UQ5 136 aa15.28■□□□□ 0.04
LRCH3-208ENST00000443727 Q8N402 240 aa15.28■□□□□ 0.04
LRCH3-208ENST00000443727 DYNLRB2Q8TF09 96 aa15.28■□□□□ 0.04
LRCH3-208ENST00000443727 CGB1A6NKQ9 187 aa15.27■□□□□ 0.04
LRCH3-208ENST00000443727 SNAPC5O75971 98 aa15.27■□□□□ 0.04
LRCH3-208ENST00000443727 TRAPPC2P0DI81 140 aa15.27■□□□□ 0.04
LRCH3-208ENST00000443727 TRAPPC2BP0DI82 140 aa15.27■□□□□ 0.04
LRCH3-208ENST00000443727 IGHV4-30-4P0DP06 118 aa15.27■□□□□ 0.04
LRCH3-208ENST00000443727 ZNF182P17025 639 aaPredicted RBP15.27■□□□□ 0.04
LRCH3-208ENST00000443727 RNASE12Q5GAN4 147 aaKnown RBP15.27■□□□□ 0.04
LRCH3-208ENST00000443727 FCAMRQ8WWV6 532 aa15.27■□□□□ 0.04
LRCH3-208ENST00000443727 SRSF8Q9BRL6 282 aaKnown RBP15.27■□□□□ 0.04
LRCH3-208ENST00000443727 HINT2Q9BX68 163 aa15.27■□□□□ 0.04
LRCH3-208ENST00000443727 MRPS26Q9BYN8 205 aaKnown RBP15.27■□□□□ 0.04
LRCH3-208ENST00000443727 IGLV11-55A0A075B6I3 123 aa15.26■□□□□ 0.03
LRCH3-208ENST00000443727 IGLC7A0M8Q6 106 aa15.26■□□□□ 0.03
LRCH3-208ENST00000443727 CYB5BO43169 146 aa15.26■□□□□ 0.03
LRCH3-208ENST00000443727 FGF2P09038 288 aa15.26■□□□□ 0.03
LRCH3-208ENST00000443727 G6PCP35575 357 aa15.26■□□□□ 0.03
LRCH3-208ENST00000443727 GPR141Q7Z602 305 aa15.26■□□□□ 0.03
LRCH3-208ENST00000443727 Q8N1Y9 231 aa15.26■□□□□ 0.03
LRCH3-208ENST00000443727 OR1L8Q8NGR8 309 aa15.26■□□□□ 0.03
LRCH3-208ENST00000443727 CXorf58Q96LI9 332 aa15.26■□□□□ 0.03
LRCH3-208ENST00000443727 CCDC140Q96MF4 163 aa15.26■□□□□ 0.03
LRCH3-208ENST00000443727 ZMAT4Q9H898 229 aa15.26■□□□□ 0.03
LRCH3-208ENST00000443727 THYN1Q9P016 225 aa15.26■□□□□ 0.03
LRCH3-208ENST00000443727 TRBV7-1A0A0A6YYK4 115 aa15.25■□□□□ 0.03
LRCH3-208ENST00000443727 TEX50A0A1B0GTY4 177 aa15.25■□□□□ 0.03
LRCH3-208ENST00000443727 IFNA6P05013 189 aa15.25■□□□□ 0.03
LRCH3-208ENST00000443727 OR13C7P0DN81 318 aa15.25■□□□□ 0.03
LRCH3-208ENST00000443727 FAM106AQ4KMX7 169 aa15.25■□□□□ 0.03
LRCH3-208ENST00000443727 THOC7Q6I9Y2 204 aaKnown RBP15.25■□□□□ 0.03
LRCH3-208ENST00000443727 HSD17B13Q7Z5P4 300 aaPredicted RBP15.25■□□□□ 0.03
LRCH3-208ENST00000443727 OR10W1Q8NGF6 305 aa15.25■□□□□ 0.03
LRCH3-208ENST00000443727 OR2K2Q8NGT1 345 aa15.25■□□□□ 0.03
LRCH3-208ENST00000443727 EXTL2Q9UBQ6 330 aa15.25■□□□□ 0.03
LRCH3-208ENST00000443727 ZNF320A2RRD8 509 aa15.24■□□□□ 0.03
LRCH3-208ENST00000443727 IZUMO1RA6ND01 250 aa15.24■□□□□ 0.03
LRCH3-208ENST00000443727 M0QYG6 137 aa15.24■□□□□ 0.03
LRCH3-208ENST00000443727 ZNF585BQ52M93 769 aa15.24■□□□□ 0.03
LRCH3-208ENST00000443727 TBC1D26Q86UD7 250 aa15.24■□□□□ 0.03
LRCH3-208ENST00000443727 GPHB5Q86YW7 130 aa15.24■□□□□ 0.03
LRCH3-208ENST00000443727 SLC38A6Q8IZM9 456 aa15.24■□□□□ 0.03
LRCH3-208ENST00000443727 RCHY1Q96PM5 261 aa15.24■□□□□ 0.03
LRCH3-208ENST00000443727 TUBA4BQ9H853 241 aa15.24■□□□□ 0.03
LRCH3-208ENST00000443727 NSG2Q9Y328 171 aa15.24■□□□□ 0.03
LRCH3-208ENST00000443727 OR51B2Q9Y5P1 312 aa15.24■□□□□ 0.03
LRCH3-208ENST00000443727 STAB2Q8WWQ8 2551 aa15.24■□□□□ 0.03
LRCH3-208ENST00000443727 MFSD2BA6NFX1 497 aa15.23■□□□□ 0.03
LRCH3-208ENST00000443727 C2orf70A6NJV1 201 aa15.23■□□□□ 0.03
LRCH3-208ENST00000443727 CLEC3BP05452 202 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms