RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 hCG_1809904A0A1W2PP81 198 aa17.11■□□□□ 0.33
PTPRF-207ENST00000436724 A0A1W2PPE2 198 aa17.11■□□□□ 0.33
PTPRF-207ENST00000436724 A0A1W2PR64 198 aa17.11■□□□□ 0.33
PTPRF-207ENST00000436724 A0A1W2PRV1 198 aa17.11■□□□□ 0.33
PTPRF-207ENST00000436724 C15orf61A6NNL5 157 aa17.11■□□□□ 0.33
PTPRF-207ENST00000436724 IGHV2-5P01817 119 aa17.11■□□□□ 0.33
PTPRF-207ENST00000436724 PRRX1P54821 245 aa17.11■□□□□ 0.33
PTPRF-207ENST00000436724 CCL20P78556 96 aa17.11■□□□□ 0.33
PTPRF-207ENST00000436724 POU2AF1Q16633 256 aa17.11■□□□□ 0.33
PTPRF-207ENST00000436724 FAM71F2Q6NXP2 309 aa17.11■□□□□ 0.33
PTPRF-207ENST00000436724 RPS10P5Q9NQ39 176 aa17.11■□□□□ 0.33
PTPRF-207ENST00000436724 FBXO7Q9Y3I1 522 aa17.11■□□□□ 0.33
PTPRF-207ENST00000436724 A0A1B0GW64 132 aa17.1■□□□□ 0.33
PTPRF-207ENST00000436724 BUB1B-PAK6H3BSN5 160 aa17.1■□□□□ 0.33
PTPRF-207ENST00000436724 GOSR1O95249 250 aa17.1■□□□□ 0.33
PTPRF-207ENST00000436724 SAA1P0DJI8 122 aaPredicted RBP17.1■□□□□ 0.33
PTPRF-207ENST00000436724 SPCS3P61009 180 aa17.1■□□□□ 0.33
PTPRF-207ENST00000436724 OR4P4Q8NGL7 312 aa17.1■□□□□ 0.33
PTPRF-207ENST00000436724 TNFRSF14Q92956 283 aa17.1■□□□□ 0.33
PTPRF-207ENST00000436724 FBN2P35556 2912 aa17.09■□□□□ 0.33
PTPRF-207ENST00000436724 LCN2P80188 198 aa17.09■□□□□ 0.33
PTPRF-207ENST00000436724 SPSB3Q6PJ21 355 aa17.09■□□□□ 0.33
PTPRF-207ENST00000436724 ZNF429Q86V71 674 aa17.09■□□□□ 0.33
PTPRF-207ENST00000436724 NRGNQ92686 78 aa17.09■□□□□ 0.33
PTPRF-207ENST00000436724 LHX4Q969G2 390 aa17.09■□□□□ 0.33
PTPRF-207ENST00000436724 FLYWCH2Q96CP2 140 aaKnown RBP17.09■□□□□ 0.33
PTPRF-207ENST00000436724 TMEM14BQ9NUH8 114 aa17.09■□□□□ 0.33
PTPRF-207ENST00000436724 TCF19Q9Y242 345 aa17.09■□□□□ 0.33
PTPRF-207ENST00000436724 C7orf77A4D0Y5 90 aa17.09■□□□□ 0.33
PTPRF-207ENST00000436724 OPN1MWP04001 364 aa17.09■□□□□ 0.33
PTPRF-207ENST00000436724 OPN1MW2P0DN77 364 aa17.09■□□□□ 0.33
PTPRF-207ENST00000436724 OPN1MW3P0DN78 364 aa17.09■□□□□ 0.33
PTPRF-207ENST00000436724 KLRD1Q13241 179 aa17.09■□□□□ 0.33
PTPRF-207ENST00000436724 AWAT1Q58HT5 328 aa17.09■□□□□ 0.33
PTPRF-207ENST00000436724 LDLRAD2Q5SZI1 272 aa17.09■□□□□ 0.33
PTPRF-207ENST00000436724 SP5Q6BEB4 398 aaPredicted RBP17.09■□□□□ 0.33
PTPRF-207ENST00000436724 C15orf54Q8N8G6 183 aa17.09■□□□□ 0.33
PTPRF-207ENST00000436724 RITA1Q96K30 269 aa17.09■□□□□ 0.33
PTPRF-207ENST00000436724 CIB3Q96Q77 187 aaPredicted RBP17.09■□□□□ 0.33
PTPRF-207ENST00000436724 RARRES2Q99969 163 aa17.09■□□□□ 0.33
PTPRF-207ENST00000436724 SLC35B3Q9H1N7 401 aa17.09■□□□□ 0.33
PTPRF-207ENST00000436724 SNRNP70P08621 437 aaKnown RBP17.08■□□□□ 0.33
PTPRF-207ENST00000436724 IL6RP08887 468 aaPredicted RBP17.08■□□□□ 0.33
PTPRF-207ENST00000436724 PAX6P26367 422 aa17.08■□□□□ 0.33
PTPRF-207ENST00000436724 IL3RAP26951 378 aa17.08■□□□□ 0.33
PTPRF-207ENST00000436724 LILRB2Q8N423 598 aa17.08■□□□□ 0.33
PTPRF-207ENST00000436724 BEND2Q8NDZ0 799 aa17.08■□□□□ 0.33
PTPRF-207ENST00000436724 LFNGQ8NES3 379 aa17.08■□□□□ 0.33
PTPRF-207ENST00000436724 CLDND2Q8NHS1 167 aa17.08■□□□□ 0.33
PTPRF-207ENST00000436724 OSR1Q8TAX0 266 aaPredicted RBP17.08■□□□□ 0.33
PTPRF-207ENST00000436724 PBDC1Q9BVG4 233 aa17.08■□□□□ 0.33
PTPRF-207ENST00000436724 PMS2P5A8MQ11 134 aa17.08■□□□□ 0.32
PTPRF-207ENST00000436724 UMAD1C9J7I0 102 aa17.08■□□□□ 0.32
PTPRF-207ENST00000436724 FOLR2P14207 255 aa17.08■□□□□ 0.32
PTPRF-207ENST00000436724 HBG1P69891 147 aa17.08■□□□□ 0.32
PTPRF-207ENST00000436724 HBG2P69892 147 aa17.08■□□□□ 0.32
PTPRF-207ENST00000436724 TMEM177Q53S58 311 aa17.08■□□□□ 0.32
PTPRF-207ENST00000436724 OR4C13Q8NGP0 309 aa17.08■□□□□ 0.32
PTPRF-207ENST00000436724 OR52E5Q8NH55 327 aa17.08■□□□□ 0.32
PTPRF-207ENST00000436724 FOXA2Q9Y261 457 aaPredicted RBP17.08■□□□□ 0.32
PTPRF-207ENST00000436724 WASHC3Q9Y3C0 194 aa17.08■□□□□ 0.32
PTPRF-207ENST00000436724 LMO4P61968 165 aa17.07■□□□□ 0.32
PTPRF-207ENST00000436724 SLC38A11Q08AI6 406 aa17.07■□□□□ 0.32
PTPRF-207ENST00000436724 PDPNQ86YL7 162 aa17.07■□□□□ 0.32
PTPRF-207ENST00000436724 ZFP82Q8N141 532 aa17.07■□□□□ 0.32
PTPRF-207ENST00000436724 HEYLQ9NQ87 328 aaPredicted RBP17.07■□□□□ 0.32
PTPRF-207ENST00000436724 KMT2BQ9UMN6 2715 aaPredicted RBP17.07■□□□□ 0.32
PTPRF-207ENST00000436724 C15orf62A8K5M9 175 aa17.06■□□□□ 0.32
PTPRF-207ENST00000436724 UPK2O00526 184 aa17.06■□□□□ 0.32
PTPRF-207ENST00000436724 DFFBO76075 338 aa17.06■□□□□ 0.32
PTPRF-207ENST00000436724 VDAC2P45880 294 aaPredicted RBP17.06■□□□□ 0.32
PTPRF-207ENST00000436724 HOXA1P49639 335 aaPredicted RBP17.06■□□□□ 0.32
PTPRF-207ENST00000436724 PDLIM3Q53GG5 364 aaPredicted RBP17.06■□□□□ 0.32
PTPRF-207ENST00000436724 C2CD4CQ8TF44 421 aa17.06■□□□□ 0.32
PTPRF-207ENST00000436724 HIST1H2BAQ96A08 127 aa17.06■□□□□ 0.32
PTPRF-207ENST00000436724 C20orf24Q9BUV8 137 aa17.06■□□□□ 0.32
PTPRF-207ENST00000436724 HINT2Q9BX68 163 aa17.06■□□□□ 0.32
PTPRF-207ENST00000436724 BIN3Q9NQY0 253 aa17.06■□□□□ 0.32
PTPRF-207ENST00000436724 OR51B2Q9Y5P1 312 aa17.06■□□□□ 0.32
PTPRF-207ENST00000436724 A0A1W2PRD5 423 aa17.06■□□□□ 0.32
PTPRF-207ENST00000436724 A0A1W2PRF3 423 aa17.06■□□□□ 0.32
PTPRF-207ENST00000436724 A0A1W2PRM7 423 aa17.06■□□□□ 0.32
PTPRF-207ENST00000436724 M0R1W7 72 aa17.06■□□□□ 0.32
PTPRF-207ENST00000436724 ENSAO43768 121 aaKnown RBP17.06■□□□□ 0.32
PTPRF-207ENST00000436724 OR13C7P0DN81 318 aa17.06■□□□□ 0.32
PTPRF-207ENST00000436724 SLC25A24Q6NUK1 477 aa17.06■□□□□ 0.32
PTPRF-207ENST00000436724 PCGF1Q9BSM1 259 aa17.06■□□□□ 0.32
PTPRF-207ENST00000436724 IGHV1-3A0A0C4DH29 117 aa17.05■□□□□ 0.32
PTPRF-207ENST00000436724 ARG1P05089 322 aa17.05■□□□□ 0.32
PTPRF-207ENST00000436724 HSPE1P61604 102 aaKnown RBP17.05■□□□□ 0.32
PTPRF-207ENST00000436724 HCP5Q6MZN7 132 aa17.05■□□□□ 0.32
PTPRF-207ENST00000436724 GNPNAT1Q96EK6 184 aaPredicted RBP17.05■□□□□ 0.32
PTPRF-207ENST00000436724 TUBA4BQ9H853 241 aa17.05■□□□□ 0.32
PTPRF-207ENST00000436724 BET1LQ9NYM9 111 aa17.05■□□□□ 0.32
PTPRF-207ENST00000436724 INSIG2Q9Y5U4 225 aa17.05■□□□□ 0.32
PTPRF-207ENST00000436724 M0R036 132 aa17.05■□□□□ 0.32
PTPRF-207ENST00000436724 IFNA10P01566 189 aa17.05■□□□□ 0.32
PTPRF-207ENST00000436724 IFNA5P01569 189 aa17.05■□□□□ 0.32
PTPRF-207ENST00000436724 HABP2Q14520 560 aaPredicted RBP17.05■□□□□ 0.32
PTPRF-207ENST00000436724 HNF4GQ14541 408 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms