RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 AGFG2O95081 481 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 SYNGR4O95473 234 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 IGKV1-39P01597 117 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 GYPAP02724 150 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 IGKV1D-39P04432 117 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 UMODP07911 640 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 SCTP09683 121 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 PPIAL4FP0DN26 164 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 GPR12P47775 334 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 CCL11P51671 97 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 CD164L2Q6UWJ8 174 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 C16orf47Q6ZP98 133 aaPredicted RBP6.74□□□□□ -1.33
VTI1A-202ENST00000432306 Q6ZRM9 215 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 LHFPL4Q7Z7J7 247 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 LINC01551Q86U37 167 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 OR10G3Q8NGC4 313 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 OR2AE1Q8NHA4 323 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 TMEM37Q8WXS4 190 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 OR4C12Q96R67 309 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 ELOVL1Q9BW60 279 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 ULBP2Q9BZM5 246 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 UBTD1Q9HAC8 227 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 ASCL3Q9NQ33 180 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 TMEM38BQ9NVV0 291 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 ZFP30Q9Y2G7 519 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 PPIAL4AQ9Y536 164 aa6.74□□□□□ -1.33
VTI1A-202ENST00000432306 CHCHD2Q9Y6H1 151 aaPredicted RBP6.74□□□□□ -1.33
VTI1A-202ENST00000432306 TEX15Q9BXT5 2789 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 LOC105371242A0A075B767 164 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 TMEM213A2RRL7 107 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 PMS2P5A8MQ11 134 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 NPIPA3F8WFD2 350 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 BRI3O95415 125 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 IGLV2-14P01704 120 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 SERPINE2P07093 398 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 P0C879 139 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 ZNF134P52741 427 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 FGF8P55075 233 aaPredicted RBP6.73□□□□□ -1.33
VTI1A-202ENST00000432306 PCBD1P61457 104 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 PPP1CBP62140 327 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 TMEM267Q0VDI3 215 aaPredicted RBP6.73□□□□□ -1.33
VTI1A-202ENST00000432306 Q0VG73 95 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 FBXW9Q5XUX1 488 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 ACSM6Q6P461 480 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 WDR74Q6RFH5 385 aaPredicted RBP6.73□□□□□ -1.33
VTI1A-202ENST00000432306 CALHM1Q8IU99 346 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 LPAR2Q9HBW0 351 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 CSDC2Q9Y534 153 aaKnown RBP6.73□□□□□ -1.33
VTI1A-202ENST00000432306 IGHV3-20A0A0C4DH32 117 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 F6UZH7 168 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 IGKV1-5P01602 117 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 REG1AP05451 166 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 NPSP0C0P6 89 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 IRF2P14316 349 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 B4GALT1P15291 398 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 DUSP3P51452 185 aaPredicted RBP6.73□□□□□ -1.33
VTI1A-202ENST00000432306 OR1D5P58170 312 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 RPS18P62269 152 aaKnown RBP6.73□□□□□ -1.33
VTI1A-202ENST00000432306 MSMO1Q15800 293 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 TMEM183BQ1AE95 376 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 OR9G4Q8NGQ1 327 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 LMX1AQ8TE12 382 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 TMEM147Q9BVK8 224 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 RBM24Q9BX46 236 aaKnown RBP6.73□□□□□ -1.33
VTI1A-202ENST00000432306 FGF21Q9NSA1 209 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 ELOVL5Q9NYP7 299 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 CACNG5Q9UF02 275 aa6.73□□□□□ -1.33
VTI1A-202ENST00000432306 TEP1Q99973 2627 aaKnown RBP6.72□□□□□ -1.33
VTI1A-202ENST00000432306 CACNA1DQ01668 2161 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 SHANK1Q9Y566 2161 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 ICE1Q9Y2F5 2266 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 SAA2-SAA4A0A096LPE2 208 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 CD300LBA8K4G0 201 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 SS18L1O75177 396 aaPredicted RBP6.72□□□□□ -1.33
VTI1A-202ENST00000432306 PSG2P11465 335 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 COX5AP20674 150 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 NPPCP23582 126 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 DSCR4P56555 118 aaPredicted RBP6.72□□□□□ -1.33
VTI1A-202ENST00000432306 CLDN18P56856 261 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 LINC00310P59036 64 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 TPPP2P59282 170 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 SLC38A11Q08AI6 406 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 RNF151Q2KHN1 245 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 ZNF585BQ52M93 769 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 MOB1BQ7L9L4 216 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 MRPL21Q7Z2W9 205 aaKnown RBP6.72□□□□□ -1.33
VTI1A-202ENST00000432306 NUFIP2Q7Z417 695 aaKnown RBP6.72□□□□□ -1.33
VTI1A-202ENST00000432306 PRSS58Q8IYP2 241 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 RPUSD4Q96CM3 377 aaKnown RBP6.72□□□□□ -1.33
VTI1A-202ENST00000432306 TBX15Q96SF7 602 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 OR2H1Q9GZK4 316 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 MSL2Q9HCI7 577 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 SH2D2AQ9NP31 389 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 KCNIP2Q9NS61 270 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 TP53TG3Q9ULZ0 132 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 TRAPPC1Q9Y5R8 145 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 LY96Q9Y6Y9 160 aa6.72□□□□□ -1.33
VTI1A-202ENST00000432306 COL27A1Q8IZC6 1860 aaPredicted RBP6.71□□□□□ -1.33
VTI1A-202ENST00000432306 FLNCQ14315 2725 aa6.71□□□□□ -1.33
VTI1A-202ENST00000432306 USP9YO00507 2555 aaPredicted RBP6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms