RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 FXYD6Q9H0Q3 95 aa13.44□□□□□ -0.26
NUP50-208ENST00000430547 TMEM140Q9NV12 185 aa13.44□□□□□ -0.26
NUP50-208ENST00000430547 U3KQK5 164 aa13.44□□□□□ -0.26
NUP50-208ENST00000430547 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.43□□□□□ -0.26
NUP50-208ENST00000430547 H0Y980 276 aa13.43□□□□□ -0.26
NUP50-208ENST00000430547 UPK2O00526 184 aa13.43□□□□□ -0.26
NUP50-208ENST00000430547 PGLYRP1O75594 196 aaPredicted RBP13.43□□□□□ -0.26
NUP50-208ENST00000430547 REG1AP05451 166 aa13.43□□□□□ -0.26
NUP50-208ENST00000430547 MYOD1P15172 320 aa13.43□□□□□ -0.26
NUP50-208ENST00000430547 HIST1H1BP16401 226 aaKnown RBP13.43□□□□□ -0.26
NUP50-208ENST00000430547 F2RP25116 425 aa13.43□□□□□ -0.26
NUP50-208ENST00000430547 CTF1Q16619 201 aa13.43□□□□□ -0.26
NUP50-208ENST00000430547 LPCAT3Q6P1A2 487 aa13.43□□□□□ -0.26
NUP50-208ENST00000430547 C19orf35Q6ZS72 473 aa13.43□□□□□ -0.26
NUP50-208ENST00000430547 LYSMD2Q8IV50 215 aa13.43□□□□□ -0.26
NUP50-208ENST00000430547 WWC2-AS2Q96NR7 200 aa13.43□□□□□ -0.26
NUP50-208ENST00000430547 A0A1B0GW64 132 aa13.42□□□□□ -0.26
NUP50-208ENST00000430547 MARCH11A6NNE9 402 aa13.42□□□□□ -0.26
NUP50-208ENST00000430547 BMPR1BO00238 502 aa13.42□□□□□ -0.26
NUP50-208ENST00000430547 CRYGCP07315 174 aa13.42□□□□□ -0.26
NUP50-208ENST00000430547 RPA2P15927 270 aa13.42□□□□□ -0.26
NUP50-208ENST00000430547 ZNF182P17025 639 aaPredicted RBP13.42□□□□□ -0.26
NUP50-208ENST00000430547 OR2B8PP59922 312 aa13.42□□□□□ -0.26
NUP50-208ENST00000430547 LCN12Q6JVE5 192 aa13.42□□□□□ -0.26
NUP50-208ENST00000430547 GPR141Q7Z602 305 aa13.42□□□□□ -0.26
NUP50-208ENST00000430547 DGCR14Q96DF8 476 aaKnown RBP13.42□□□□□ -0.26
NUP50-208ENST00000430547 DNAH9Q9NYC9 4486 aa13.41□□□□□ -0.26
NUP50-208ENST00000430547 TRAV3A0A0B4J244 114 aa13.41□□□□□ -0.26
NUP50-208ENST00000430547 CYB5BO43169 146 aa13.41□□□□□ -0.26
NUP50-208ENST00000430547 FGF2P09038 288 aa13.41□□□□□ -0.26
NUP50-208ENST00000430547 CTRB1P17538 263 aa13.41□□□□□ -0.26
NUP50-208ENST00000430547 LPAR6P43657 344 aa13.41□□□□□ -0.26
NUP50-208ENST00000430547 PHLDA2Q53GA4 152 aa13.41□□□□□ -0.26
NUP50-208ENST00000430547 RNASE12Q5GAN4 147 aaKnown RBP13.41□□□□□ -0.26
NUP50-208ENST00000430547 CTRB2Q6GPI1 263 aa13.41□□□□□ -0.26
NUP50-208ENST00000430547 SGPP2Q8IWX5 399 aa13.41□□□□□ -0.26
NUP50-208ENST00000430547 EEF1AKMT3Q96AZ1 226 aa13.41□□□□□ -0.26
NUP50-208ENST00000430547 QTRT1Q9BXR0 403 aaKnown RBP13.41□□□□□ -0.26
NUP50-208ENST00000430547 SIGLEC8Q9NYZ4 499 aa13.41□□□□□ -0.26
NUP50-208ENST00000430547 PPP5D1E7EU14 171 aa13.4□□□□□ -0.26
NUP50-208ENST00000430547 GGCTO75223 188 aaKnown RBP13.4□□□□□ -0.26
NUP50-208ENST00000430547 SNAPC5O75971 98 aa13.4□□□□□ -0.26
NUP50-208ENST00000430547 NDUFB8O95169 186 aa13.4□□□□□ -0.26
NUP50-208ENST00000430547 IGHV3-23P01764 117 aa13.4□□□□□ -0.26
NUP50-208ENST00000430547 IFNA6P05013 189 aa13.4□□□□□ -0.26
NUP50-208ENST00000430547 CSN3P07498 182 aa13.4□□□□□ -0.26
NUP50-208ENST00000430547 FRMD6-AS1P0C7T7 363 aa13.4□□□□□ -0.26
NUP50-208ENST00000430547 ARL3P36405 182 aa13.4□□□□□ -0.26
NUP50-208ENST00000430547 THOC7Q6I9Y2 204 aaKnown RBP13.4□□□□□ -0.26
NUP50-208ENST00000430547 IL34Q6ZMJ4 242 aa13.4□□□□□ -0.26
NUP50-208ENST00000430547 GTSCR1Q86UQ5 136 aa13.4□□□□□ -0.26
NUP50-208ENST00000430547 Q8N402 240 aa13.4□□□□□ -0.26
NUP50-208ENST00000430547 FCAMRQ8WWV6 532 aa13.4□□□□□ -0.26
NUP50-208ENST00000430547 CXorf58Q96LI9 332 aa13.4□□□□□ -0.26
NUP50-208ENST00000430547 FANCD2OSQ96PS1 177 aa13.4□□□□□ -0.26
NUP50-208ENST00000430547 SRSF8Q9BRL6 282 aaKnown RBP13.4□□□□□ -0.26
NUP50-208ENST00000430547 THYN1Q9P016 225 aa13.4□□□□□ -0.26
NUP50-208ENST00000430547 EXTL2Q9UBQ6 330 aa13.4□□□□□ -0.26
NUP50-208ENST00000430547 CGB1A6NKQ9 187 aa13.39□□□□□ -0.27
NUP50-208ENST00000430547 KRASP01116 189 aa13.39□□□□□ -0.27
NUP50-208ENST00000430547 CLEC19AQ6UXS0 136 aa13.39□□□□□ -0.27
NUP50-208ENST00000430547 HSD17B13Q7Z5P4 300 aaPredicted RBP13.39□□□□□ -0.27
NUP50-208ENST00000430547 SLC38A6Q8IZM9 456 aa13.39□□□□□ -0.27
NUP50-208ENST00000430547 DYNLRB2Q8TF09 96 aa13.39□□□□□ -0.27
NUP50-208ENST00000430547 C15orf40Q8WUR7 153 aa13.39□□□□□ -0.27
NUP50-208ENST00000430547 HINT2Q9BX68 163 aa13.39□□□□□ -0.27
NUP50-208ENST00000430547 S4R3C0 116 aa13.39□□□□□ -0.27
NUP50-208ENST00000430547 IGLV11-55A0A075B6I3 123 aa13.38□□□□□ -0.27
NUP50-208ENST00000430547 TRBV7-1A0A0A6YYK4 115 aa13.38□□□□□ -0.27
NUP50-208ENST00000430547 IGLC7A0M8Q6 106 aa13.38□□□□□ -0.27
NUP50-208ENST00000430547 M0QYG6 137 aa13.38□□□□□ -0.27
NUP50-208ENST00000430547 RGS5O15539 181 aa13.38□□□□□ -0.27
NUP50-208ENST00000430547 HLA-AP01891 365 aaKnown RBP13.38□□□□□ -0.27
NUP50-208ENST00000430547 TRAPPC2P0DI81 140 aa13.38□□□□□ -0.27
NUP50-208ENST00000430547 TRAPPC2BP0DI82 140 aa13.38□□□□□ -0.27
NUP50-208ENST00000430547 G6PCP35575 357 aa13.38□□□□□ -0.27
NUP50-208ENST00000430547 RNASE10Q5GAN6 216 aaKnown RBP13.38□□□□□ -0.27
NUP50-208ENST00000430547 OR1L8Q8NGR8 309 aa13.38□□□□□ -0.27
NUP50-208ENST00000430547 OR2K2Q8NGT1 345 aa13.38□□□□□ -0.27
NUP50-208ENST00000430547 OR2C1O95371 312 aa13.37□□□□□ -0.27
NUP50-208ENST00000430547 UCP3P55916 312 aa13.37□□□□□ -0.27
NUP50-208ENST00000430547 TBC1D26Q86UD7 250 aa13.37□□□□□ -0.27
NUP50-208ENST00000430547 SBSPONQ8IVN8 264 aa13.37□□□□□ -0.27
NUP50-208ENST00000430547 CCDC140Q96MF4 163 aa13.37□□□□□ -0.27
NUP50-208ENST00000430547 TSC22D3Q99576 134 aa13.37□□□□□ -0.27
NUP50-208ENST00000430547 ZMAT4Q9H898 229 aa13.37□□□□□ -0.27
NUP50-208ENST00000430547 FAM212BQ9NTI7 297 aaPredicted RBP13.37□□□□□ -0.27
NUP50-208ENST00000430547 KLK11Q9UBX7 282 aa13.37□□□□□ -0.27
NUP50-208ENST00000430547 OR51B2Q9Y5P1 312 aa13.37□□□□□ -0.27
NUP50-208ENST00000430547 TEX50A0A1B0GTY4 177 aa13.36□□□□□ -0.27
NUP50-208ENST00000430547 TPPPO94811 219 aa13.36□□□□□ -0.27
NUP50-208ENST00000430547 OR13C7P0DN81 318 aa13.36□□□□□ -0.27
NUP50-208ENST00000430547 IGHV4-30-4P0DP06 118 aa13.36□□□□□ -0.27
NUP50-208ENST00000430547 PGAM2P15259 253 aa13.36□□□□□ -0.27
NUP50-208ENST00000430547 ALDH3B2P48448 385 aa13.36□□□□□ -0.27
NUP50-208ENST00000430547 MECP2P51608 486 aaKnown RBP13.36□□□□□ -0.27
NUP50-208ENST00000430547 KLK9Q2XQG4 91 aa13.36□□□□□ -0.27
NUP50-208ENST00000430547 FAM106AQ4KMX7 169 aa13.36□□□□□ -0.27
NUP50-208ENST00000430547 ZNF585BQ52M93 769 aa13.36□□□□□ -0.27
NUP50-208ENST00000430547 GDPD1Q8N9F7 314 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms