RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 RFNGQ9Y644 331 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 HLA-DRB4X5D2U9 266 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 VWA8A3KMH1 1905 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 KIF26BQ2KJY2 2108 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 FANCMQ8IYD8 2048 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 IGHV1-24A0A0C4DH33 117 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 KRTAP9-6A0A140TA67 174 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 H0YGG7 62 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 K7EQS6 105 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 K7ESM1 405 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 M0R135 149 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 DHHO43323 396 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 KLF7O75840 302 aaPredicted RBP4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 STATHP02808 62 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 SPINK8P0C7L1 97 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 MGST1P10620 155 aaKnown RBP4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 GCHFRP30047 84 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 G6PCP35575 357 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 ATP5G3P48201 142 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 FBXW4P57775 412 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 ERVK11-1P61568 191 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 SLC35B1P78383 322 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 PLGLB1Q02325 96 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 TNXAQ16473 311 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 CENPWQ5EE01 88 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 PLPP4Q5VZY2 271 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 LYSMD4Q5XG99 296 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 CARD17Q5XLA6 110 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 EBLN2Q6P2I7 272 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 RSPO2Q6UXX9 243 aaPredicted RBP4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 ADAMTSL5Q6ZMM2 481 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 Q6ZVH6 145 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 SFTPA2Q8IWL1 248 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 SFTPA1Q8IWL2 248 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 OR10X1Q8NGY0 326 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 PIFOQ8TCI5 191 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 PIGTQ969N2 578 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 ZNF799Q96GE5 643 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 RCHY1Q96PM5 261 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 FOXQ1Q9C009 403 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 GFRA4Q9GZZ7 299 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 RAB1BQ9H0U4 201 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 WDR54Q9H977 334 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 SERTAD4Q9NUC0 356 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 DUSP13Q9UII6 198 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 RAXQ9Y2V3 346 aa4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 CHD3Q12873 2000 aaKnown RBP4.7□□□□□ -1.66
VTI1BP4-201ENST00000427516 ZNF816-ZNF321PA0A0X1KG74 233 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 A0A1W2PQM1 296 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 A0A1W2PRE2 83 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 GAGE12JA6NER3 117 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 A8MWL6 223 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 C2CD4DB7Z1M9 353 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 H0YIG0 161 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 H3BMG7 143 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 NKX2-8O15522 239 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 DNPH1O43598 174 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 GAGE7O76087 117 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 APOMO95445 188 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 IGKV1D-33P01593 117 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 IGKV1-33P01594 117 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 CRYAAP02489 173 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 GAGE12FP0CL80 117 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 GAGE12GP0CL81 117 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 GAGE12IP0CL82 117 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 ARL14EPLP0DKL9 152 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 GLI4P10075 376 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 GCSHP23434 173 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 OTX2P32243 289 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 ASIPP42127 132 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 MFAP2P55001 183 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 TMPRSS3P57727 454 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 PCBD1P61457 104 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 RPS21P63220 83 aaKnown RBP4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 C17orf67Q0P5P2 114 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 GAGE4Q13068 117 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 LGALS9BQ3B8N2 356 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 ZNF718Q3SXZ3 478 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 GAGE13Q4V321 117 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 C5orf47Q569G3 176 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 DMRTC1Q5HYR2 192 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 GCSAMLQ5JQS6 135 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 Q6AWC8 147 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 LGALS9CQ6DKI2 356 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 LCN12Q6JVE5 192 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 PRSS41Q7RTY9 318 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 FAM19A2Q8N3H0 131 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 ZADH2Q8N4Q0 377 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 MRPL43Q8N983 215 aaKnown RBP4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 GATSQ8NAP1 163 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 OR10G6Q8NH81 332 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 RLN3Q8WXF3 142 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 NAT6Q93015 286 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 TMEM54Q969K7 222 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 PERPQ96FX8 193 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 OXGR1Q96P68 337 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 HDHD3Q9BSH5 251 aaPredicted RBP4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 SLC25A33Q9BSK2 321 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 NDFIP1Q9BT67 221 aa4.69□□□□□ -1.66
VTI1BP4-201ENST00000427516 MRPL32Q9BYC8 188 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms