RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 MEF2CQ06413 473 aaPredicted RBP13.65□□□□□ -0.22
CMTM3-202ENST00000424011 DMRTA1Q5VZB9 504 aa13.65□□□□□ -0.22
CMTM3-202ENST00000424011 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.65□□□□□ -0.22
CMTM3-202ENST00000424011 PSENENQ9NZ42 101 aa13.65□□□□□ -0.22
CMTM3-202ENST00000424011 CISD1Q9NZ45 108 aaKnown RBP13.65□□□□□ -0.22
CMTM3-202ENST00000424011 NBASA2RRP1 2371 aa13.65□□□□□ -0.22
CMTM3-202ENST00000424011 ADGRG4Q8IZF6 3080 aa13.65□□□□□ -0.23
CMTM3-202ENST00000424011 SCAF4O95104 1147 aaKnown RBP13.64□□□□□ -0.23
CMTM3-202ENST00000424011 S1PR2O95136 353 aa13.64□□□□□ -0.23
CMTM3-202ENST00000424011 DUTP33316 252 aaKnown RBP13.64□□□□□ -0.23
CMTM3-202ENST00000424011 G6PCP35575 357 aa13.64□□□□□ -0.23
CMTM3-202ENST00000424011 LINC00205P59089 165 aa13.64□□□□□ -0.23
CMTM3-202ENST00000424011 CCL20P78556 96 aa13.64□□□□□ -0.23
CMTM3-202ENST00000424011 COA6Q5JTJ3 125 aaKnown RBP13.64□□□□□ -0.23
CMTM3-202ENST00000424011 DUX4L9Q6RFH8 374 aaPredicted RBP13.64□□□□□ -0.23
CMTM3-202ENST00000424011 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.64□□□□□ -0.23
CMTM3-202ENST00000424011 TMEM242Q9NWH2 141 aa13.64□□□□□ -0.23
CMTM3-202ENST00000424011 IDI2-AS1Q9NZ38 188 aa13.64□□□□□ -0.23
CMTM3-202ENST00000424011 SLC25A10Q9UBX3 287 aaPredicted RBP13.64□□□□□ -0.23
CMTM3-202ENST00000424011 LINC00312Q9Y6C7 94 aa13.64□□□□□ -0.23
CMTM3-202ENST00000424011 RAB29O14966 203 aa13.64□□□□□ -0.23
CMTM3-202ENST00000424011 KIR2DS2P43631 304 aa13.64□□□□□ -0.23
CMTM3-202ENST00000424011 ARL16Q0P5N6 197 aa13.64□□□□□ -0.23
CMTM3-202ENST00000424011 IQCJQ1A5X6 159 aa13.64□□□□□ -0.23
CMTM3-202ENST00000424011 AARDQ4LEZ3 155 aa13.64□□□□□ -0.23
CMTM3-202ENST00000424011 ARSJQ5FYB0 599 aaPredicted RBP13.64□□□□□ -0.23
CMTM3-202ENST00000424011 TEX38Q6PEX7 206 aa13.64□□□□□ -0.23
CMTM3-202ENST00000424011 OR10A7Q8NGE5 316 aa13.64□□□□□ -0.23
CMTM3-202ENST00000424011 NEUROG1Q92886 237 aa13.64□□□□□ -0.23
CMTM3-202ENST00000424011 GNPNAT1Q96EK6 184 aaPredicted RBP13.64□□□□□ -0.23
CMTM3-202ENST00000424011 IFI27L2Q9H2X8 130 aa13.64□□□□□ -0.23
CMTM3-202ENST00000424011 GAL3ST2Q9H3Q3 398 aa13.64□□□□□ -0.23
CMTM3-202ENST00000424011 TRBV24-1A0A075B6N3 115 aa13.63□□□□□ -0.23
CMTM3-202ENST00000424011 LINC00473A8K010 186 aa13.63□□□□□ -0.23
CMTM3-202ENST00000424011 HSPB1P04792 205 aaKnown RBP13.63□□□□□ -0.23
CMTM3-202ENST00000424011 P0C879 139 aa13.63□□□□□ -0.23
CMTM3-202ENST00000424011 H2BFWTQ7Z2G1 175 aa13.63□□□□□ -0.23
CMTM3-202ENST00000424011 CYB561D1Q8N8Q1 229 aa13.63□□□□□ -0.23
CMTM3-202ENST00000424011 OR4X1Q8NH49 305 aa13.63□□□□□ -0.23
CMTM3-202ENST00000424011 KIAA1456Q9P272 454 aa13.63□□□□□ -0.23
CMTM3-202ENST00000424011 VAX2Q9UIW0 290 aa13.63□□□□□ -0.23
CMTM3-202ENST00000424011 CACNA1DQ01668 2161 aa13.63□□□□□ -0.23
CMTM3-202ENST00000424011 RBFOX2O43251 390 aaKnown RBP eCLIP13.63□□□□□ -0.23
CMTM3-202ENST00000424011 HPRT1P00492 218 aa13.63□□□□□ -0.23
CMTM3-202ENST00000424011 C1orf194Q5T5A4 169 aa13.63□□□□□ -0.23
CMTM3-202ENST00000424011 SPSB3Q6PJ21 355 aa13.63□□□□□ -0.23
CMTM3-202ENST00000424011 HAPLN4Q86UW8 402 aa13.63□□□□□ -0.23
CMTM3-202ENST00000424011 KIR2DL5BA0A0G2JN68 375 aa13.62□□□□□ -0.23
CMTM3-202ENST00000424011 KIR2DL5BA0A0G2JPC4 375 aa13.62□□□□□ -0.23
CMTM3-202ENST00000424011 CLDN34H7C241 214 aa13.62□□□□□ -0.23
CMTM3-202ENST00000424011 M0R1X1 148 aa13.62□□□□□ -0.23
CMTM3-202ENST00000424011 ZNF134P52741 427 aa13.62□□□□□ -0.23
CMTM3-202ENST00000424011 KIR2DL5AQ8N109 375 aa13.62□□□□□ -0.23
CMTM3-202ENST00000424011 HSPB7Q9UBY9 170 aa13.62□□□□□ -0.23
CMTM3-202ENST00000424011 IGHV1-69-2A0A0G2JMI3 117 aa13.62□□□□□ -0.23
CMTM3-202ENST00000424011 NDUFB3O43676 98 aa13.62□□□□□ -0.23
CMTM3-202ENST00000424011 ICAM4Q14773 271 aa13.62□□□□□ -0.23
CMTM3-202ENST00000424011 LRRC10Q5BKY1 277 aa13.62□□□□□ -0.23
CMTM3-202ENST00000424011 NCR3LG1Q68D85 454 aa13.62□□□□□ -0.23
CMTM3-202ENST00000424011 TCF23Q7RTU1 214 aa13.62□□□□□ -0.23
CMTM3-202ENST00000424011 MUC15Q8N387 334 aa13.62□□□□□ -0.23
CMTM3-202ENST00000424011 S1PR3Q99500 378 aa13.62□□□□□ -0.23
CMTM3-202ENST00000424011 RBKSQ9H477 322 aa13.62□□□□□ -0.23
CMTM3-202ENST00000424011 FAM90A9PA6NNJ1 464 aa13.61□□□□□ -0.23
CMTM3-202ENST00000424011 GRNP28799 593 aaKnown RBP13.61□□□□□ -0.23
CMTM3-202ENST00000424011 RPL31P62899 125 aaKnown RBP13.61□□□□□ -0.23
CMTM3-202ENST00000424011 CDSNQ15517 529 aa13.61□□□□□ -0.23
CMTM3-202ENST00000424011 ZNF672Q499Z4 452 aaPredicted RBP13.61□□□□□ -0.23
CMTM3-202ENST00000424011 SPANXN5Q5MJ07 72 aa13.61□□□□□ -0.23
CMTM3-202ENST00000424011 FCGR3BO75015 233 aa13.61□□□□□ -0.23
CMTM3-202ENST00000424011 PROP1O75360 226 aa13.61□□□□□ -0.23
CMTM3-202ENST00000424011 IFNA5P01569 189 aa13.61□□□□□ -0.23
CMTM3-202ENST00000424011 HBG1P69891 147 aa13.61□□□□□ -0.23
CMTM3-202ENST00000424011 HBG2P69892 147 aa13.61□□□□□ -0.23
CMTM3-202ENST00000424011 CT45A1Q5HYN5 189 aa13.61□□□□□ -0.23
CMTM3-202ENST00000424011 ZNF506Q5JVG8 444 aa13.61□□□□□ -0.23
CMTM3-202ENST00000424011 ZNF525Q8N782 197 aa13.61□□□□□ -0.23
CMTM3-202ENST00000424011 CT45A3Q8NHU0 189 aa13.61□□□□□ -0.23
CMTM3-202ENST00000424011 ADTRPQ96IZ2 230 aa13.61□□□□□ -0.23
CMTM3-202ENST00000424011 KAAG1Q9UBP8 84 aa13.61□□□□□ -0.23
CMTM3-202ENST00000424011 RPUSD1Q9UJJ7 312 aaKnown RBP13.61□□□□□ -0.23
CMTM3-202ENST00000424011 DYSFO75923 2080 aa13.6□□□□□ -0.23
CMTM3-202ENST00000424011 TNFRSF13BO14836 293 aaPredicted RBP13.6□□□□□ -0.23
CMTM3-202ENST00000424011 PLAUP00749 431 aa13.6□□□□□ -0.23
CMTM3-202ENST00000424011 SLC25A24Q6NUK1 477 aa13.6□□□□□ -0.23
CMTM3-202ENST00000424011 LPAR2Q9HBW0 351 aa13.6□□□□□ -0.23
CMTM3-202ENST00000424011 PLCE1Q9P212 2302 aa13.6□□□□□ -0.23
CMTM3-202ENST00000424011 XKRY2A2RUG3 117 aa13.59□□□□□ -0.23
CMTM3-202ENST00000424011 RPL29P47914 159 aaKnown RBP13.59□□□□□ -0.23
CMTM3-202ENST00000424011 THBS3P49746 956 aa13.59□□□□□ -0.23
CMTM3-202ENST00000424011 PDLIM4P50479 330 aa13.59□□□□□ -0.23
CMTM3-202ENST00000424011 ERVK-16P61578 105 aa13.59□□□□□ -0.23
CMTM3-202ENST00000424011 RPL39P5Q59GN2 51 aa13.59□□□□□ -0.23
CMTM3-202ENST00000424011 CIB3Q96Q77 187 aaPredicted RBP13.59□□□□□ -0.23
CMTM3-202ENST00000424011 RSG1Q9BU20 258 aa13.59□□□□□ -0.23
CMTM3-202ENST00000424011 SRD5A3Q9H8P0 318 aa13.59□□□□□ -0.23
CMTM3-202ENST00000424011 RBMXL2O75526 392 aaKnown RBP13.59□□□□□ -0.23
CMTM3-202ENST00000424011 IGHV3-7P01780 117 aa13.59□□□□□ -0.23
CMTM3-202ENST00000424011 OPN1MWP04001 364 aa13.59□□□□□ -0.23
CMTM3-202ENST00000424011 OPN1MW2P0DN77 364 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms