RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 SPANXN5Q5MJ07 72 aa13.9□□□□□ -0.19
PTPRC-206ENST00000413409 TREML4Q6UXN2 200 aa13.9□□□□□ -0.19
PTPRC-206ENST00000413409 LYG1Q8N1E2 194 aa13.9□□□□□ -0.19
PTPRC-206ENST00000413409 LILRB2Q8N423 598 aa13.9□□□□□ -0.19
PTPRC-206ENST00000413409 ZNF596Q8TC21 504 aa13.9□□□□□ -0.19
PTPRC-206ENST00000413409 LEAP2Q969E1 77 aa13.9□□□□□ -0.19
PTPRC-206ENST00000413409 CTSZQ9UBR2 303 aa13.9□□□□□ -0.19
PTPRC-206ENST00000413409 A0A1B0GW64 132 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 BTBD17A6NE02 478 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 MMP23AO75900 390 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 OR9G9P0C7N8 305 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 SNCAP37840 140 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 LINC00205P59089 165 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 SPCS3P61009 180 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 UTF1Q5T230 341 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 AKR1C8PQ5T2L2 129 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 SLC25A24Q6NUK1 477 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 ZNF833PQ6ZTB9 187 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 ZNF429Q86V71 674 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 LINC00311Q8N616 119 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 FAM213BQ8TBF2 198 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 SCGB1C1Q8TD33 95 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 OR4C12Q96R67 309 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 ZNF747Q9BV97 191 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 SEC11CQ9BY50 192 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 BPESC1Q9GZL8 116 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 TREM1Q9NP99 234 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 UQCC1Q9NVA1 299 aa13.89□□□□□ -0.19
PTPRC-206ENST00000413409 CEBPZOSA8MTT3 80 aa13.88□□□□□ -0.19
PTPRC-206ENST00000413409 DVL1O14640 695 aa13.88□□□□□ -0.19
PTPRC-206ENST00000413409 SCO1O75880 301 aa13.88□□□□□ -0.19
PTPRC-206ENST00000413409 APOC3P02656 99 aa13.88□□□□□ -0.19
PTPRC-206ENST00000413409 ARG1P05089 322 aa13.88□□□□□ -0.19
PTPRC-206ENST00000413409 GNG10P50151 68 aa13.88□□□□□ -0.19
PTPRC-206ENST00000413409 DLX6P56179 175 aa13.88□□□□□ -0.19
PTPRC-206ENST00000413409 TAGLNQ01995 201 aaKnown RBP13.88□□□□□ -0.19
PTPRC-206ENST00000413409 LRRC75BQ2VPJ9 315 aa13.88□□□□□ -0.19
PTPRC-206ENST00000413409 TMEM155Q4W5P6 130 aa13.88□□□□□ -0.19
PTPRC-206ENST00000413409 TMEM200BQ69YZ2 307 aa13.88□□□□□ -0.19
PTPRC-206ENST00000413409 LYPD2Q6UXB3 125 aa13.88□□□□□ -0.19
PTPRC-206ENST00000413409 C1orf229Q6ZS94 237 aaPredicted RBP13.88□□□□□ -0.19
PTPRC-206ENST00000413409 PUSL1Q8N0Z8 303 aaKnown RBP13.88□□□□□ -0.19
PTPRC-206ENST00000413409 ZNF383Q8NA42 475 aa13.88□□□□□ -0.19
PTPRC-206ENST00000413409 OR4A16Q8NH70 328 aa13.88□□□□□ -0.19
PTPRC-206ENST00000413409 PINX1Q96BK5 328 aaKnown RBP13.88□□□□□ -0.19
PTPRC-206ENST00000413409 TMEM147Q9BVK8 224 aa13.88□□□□□ -0.19
PTPRC-206ENST00000413409 QTRT1Q9BXR0 403 aaKnown RBP13.88□□□□□ -0.19
PTPRC-206ENST00000413409 TMEM140Q9NV12 185 aa13.88□□□□□ -0.19
PTPRC-206ENST00000413409 TIMM9Q9Y5J7 89 aa13.88□□□□□ -0.19
PTPRC-206ENST00000413409 A0A087X0M5 115 aa13.87□□□□□ -0.19
PTPRC-206ENST00000413409 A0A1B0GX30 115 aa13.87□□□□□ -0.19
PTPRC-206ENST00000413409 A0A1W2PPE3 182 aa13.87□□□□□ -0.19
PTPRC-206ENST00000413409 RNASEK-C17orf49H0YIS7 233 aa13.87□□□□□ -0.19
PTPRC-206ENST00000413409 RBMXL2O75526 392 aaKnown RBP13.87□□□□□ -0.19
PTPRC-206ENST00000413409 IGHV3-7P01780 117 aa13.87□□□□□ -0.19
PTPRC-206ENST00000413409 ADCYAP1P18509 176 aa13.87□□□□□ -0.19
PTPRC-206ENST00000413409 SRSF3P84103 164 aaKnown RBP13.87□□□□□ -0.19
PTPRC-206ENST00000413409 RUNX1Q01196 453 aa13.87□□□□□ -0.19
PTPRC-206ENST00000413409 RELBQ01201 579 aa13.87□□□□□ -0.19
PTPRC-206ENST00000413409 SVBPQ8N300 66 aa13.87□□□□□ -0.19
PTPRC-206ENST00000413409 SUN5Q8TC36 379 aa13.87□□□□□ -0.19
PTPRC-206ENST00000413409 H1FXQ92522 213 aaKnown RBP13.87□□□□□ -0.19
PTPRC-206ENST00000413409 CLCC1Q96S66 551 aa13.87□□□□□ -0.19
PTPRC-206ENST00000413409 WDR61Q9GZS3 305 aaKnown RBP13.87□□□□□ -0.19
PTPRC-206ENST00000413409 C15orf61A6NNL5 157 aa13.86□□□□□ -0.19
PTPRC-206ENST00000413409 PMS2P5A8MQ11 134 aa13.86□□□□□ -0.19
PTPRC-206ENST00000413409 GPR37O15354 613 aa13.86□□□□□ -0.19
PTPRC-206ENST00000413409 HRASP01112 189 aa13.86□□□□□ -0.19
PTPRC-206ENST00000413409 IGHV2-70P01814 119 aa13.86□□□□□ -0.19
PTPRC-206ENST00000413409 HBE1P02100 147 aa13.86□□□□□ -0.19
PTPRC-206ENST00000413409 CCL3L1P16619 93 aa13.86□□□□□ -0.19
PTPRC-206ENST00000413409 FHITP49789 147 aa13.86□□□□□ -0.19
PTPRC-206ENST00000413409 RPP30P78346 268 aaKnown RBP13.86□□□□□ -0.19
PTPRC-206ENST00000413409 RTL8BQ17RB0 113 aa13.86□□□□□ -0.19
PTPRC-206ENST00000413409 VWC2Q2TAL6 325 aa13.86□□□□□ -0.19
PTPRC-206ENST00000413409 LINC01356Q8N9X3 169 aa13.86□□□□□ -0.19
PTPRC-206ENST00000413409 PBDC1Q9BVG4 233 aa13.86□□□□□ -0.19
PTPRC-206ENST00000413409 SMDT1Q9H4I9 107 aa13.86□□□□□ -0.19
PTPRC-206ENST00000413409 FOXA2Q9Y261 457 aaPredicted RBP13.86□□□□□ -0.19
PTPRC-206ENST00000413409 FAM96BQ9Y3D0 163 aa13.86□□□□□ -0.19
PTPRC-206ENST00000413409 F8W036 122 aa13.85□□□□□ -0.19
PTPRC-206ENST00000413409 ZNF137PP52743 207 aa13.85□□□□□ -0.19
PTPRC-206ENST00000413409 OR2B8PP59922 312 aa13.85□□□□□ -0.19
PTPRC-206ENST00000413409 HILS1P60008 231 aa13.85□□□□□ -0.19
PTPRC-206ENST00000413409 GNB2P62879 340 aa13.85□□□□□ -0.19
PTPRC-206ENST00000413409 SERF2P84101 59 aa13.85□□□□□ -0.19
PTPRC-206ENST00000413409 AKR1C1Q04828 323 aa13.85□□□□□ -0.19
PTPRC-206ENST00000413409 PEA15Q15121 130 aa13.85□□□□□ -0.19
PTPRC-206ENST00000413409 SHISA2Q6UWI4 295 aa13.85□□□□□ -0.19
PTPRC-206ENST00000413409 CENPVQ7Z7K6 275 aaPredicted RBP13.85□□□□□ -0.19
PTPRC-206ENST00000413409 THNSL2Q86YJ6 484 aa13.85□□□□□ -0.19
PTPRC-206ENST00000413409 ZDHHC16Q969W1 377 aa13.85□□□□□ -0.19
PTPRC-206ENST00000413409 AIFM2Q9BRQ8 373 aa13.85□□□□□ -0.19
PTPRC-206ENST00000413409 SCRT1Q9BWW7 348 aa13.85□□□□□ -0.19
PTPRC-206ENST00000413409 RAB1BQ9H0U4 201 aa13.85□□□□□ -0.19
PTPRC-206ENST00000413409 WNK1Q9H4A3 2382 aa13.84□□□□□ -0.19
PTPRC-206ENST00000413409 IFNA17P01571 189 aa13.84□□□□□ -0.19
PTPRC-206ENST00000413409 APOA2P02652 100 aa13.84□□□□□ -0.19
PTPRC-206ENST00000413409 RBP4P02753 201 aa13.84□□□□□ -0.19
PTPRC-206ENST00000413409 CT45A6P0DMU7 189 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms