RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 TANC2Q9HCD6 1990 aa13.8□□□□□ -0.2
NUP50-203ENST00000407019 IFITM10A6NMD0 228 aa13.8□□□□□ -0.2
NUP50-203ENST00000407019 C17orf100A8MU93 164 aa13.8□□□□□ -0.2
NUP50-203ENST00000407019 CA2P00918 260 aa13.8□□□□□ -0.2
NUP50-203ENST00000407019 OR4A8P0C604 315 aa13.8□□□□□ -0.2
NUP50-203ENST00000407019 NPPCP23582 126 aa13.8□□□□□ -0.2
NUP50-203ENST00000407019 GALR1P47211 349 aa13.8□□□□□ -0.2
NUP50-203ENST00000407019 RTL8BQ17RB0 113 aa13.8□□□□□ -0.2
NUP50-203ENST00000407019 ARSJQ5FYB0 599 aaPredicted RBP13.8□□□□□ -0.2
NUP50-203ENST00000407019 CST9LP1Q5W188 147 aa13.8□□□□□ -0.2
NUP50-203ENST00000407019 NECAP1Q8NC96 275 aa13.8□□□□□ -0.2
NUP50-203ENST00000407019 OR10A7Q8NGE5 316 aa13.8□□□□□ -0.2
NUP50-203ENST00000407019 ABHD5Q8WTS1 349 aa13.8□□□□□ -0.2
NUP50-203ENST00000407019 ANAPC16Q96DE5 110 aa13.8□□□□□ -0.2
NUP50-203ENST00000407019 SLC35D1Q9NTN3 355 aa13.8□□□□□ -0.2
NUP50-203ENST00000407019 DSCAML1Q8TD84 2053 aa13.8□□□□□ -0.2
NUP50-203ENST00000407019 ATP5G3P48201 142 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 CISD2Q8N5K1 135 aaKnown RBP13.79□□□□□ -0.2
NUP50-203ENST00000407019 C1orf159Q96HA4 380 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 PYGO2Q9BRQ0 406 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 GAL3ST2Q9H3Q3 398 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 SRD5A3Q9H8P0 318 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 TET2Q6N021 2002 aaPredicted RBP13.79□□□□□ -0.2
NUP50-203ENST00000407019 ELOA3CA0A087WX78 387 aaPredicted RBP13.79□□□□□ -0.2
NUP50-203ENST00000407019 F6UZH7 168 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 PPP1R2P9O14990 202 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 CXorf1O96002 111 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 IL6RP08887 468 aaPredicted RBP13.79□□□□□ -0.2
NUP50-203ENST00000407019 STAG3L2P0CL84 134 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 STAG3L3P0CL85 134 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 ARL14EPLP0DKL9 152 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 CT45A6P0DMU7 189 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 CT45A5P0DMU8 189 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 CT45A7P0DMV0 189 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 MYOD1P15172 320 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 S100A2P29034 98 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 B2MP61769 119 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 BSPH1Q075Z2 132 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 TEPPQ6URK8 271 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 OR51G1Q8NGK1 321 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 SSMEM1Q8WWF3 244 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 HINT2Q9BX68 163 aa13.79□□□□□ -0.2
NUP50-203ENST00000407019 SLC25A10Q9UBX3 287 aaPredicted RBP13.79□□□□□ -0.2
NUP50-203ENST00000407019 UPK2O00526 184 aa13.78□□□□□ -0.2
NUP50-203ENST00000407019 PHOX2AO14813 284 aa13.78□□□□□ -0.2
NUP50-203ENST00000407019 THBDP07204 575 aa13.78□□□□□ -0.2
NUP50-203ENST00000407019 GNB1P62873 340 aa13.78□□□□□ -0.2
NUP50-203ENST00000407019 GFRALQ6UXV0 394 aa13.78□□□□□ -0.2
NUP50-203ENST00000407019 PLEKHA3Q9HB20 300 aa13.78□□□□□ -0.2
NUP50-203ENST00000407019 GAR1Q9NY12 217 aaKnown RBP13.78□□□□□ -0.2
NUP50-203ENST00000407019 SH3BGRL2Q9UJC5 107 aa13.78□□□□□ -0.2
NUP50-203ENST00000407019 ZNF257Q9Y2Q1 563 aa13.78□□□□□ -0.2
NUP50-203ENST00000407019 FABP1P07148 127 aa13.78□□□□□ -0.2
NUP50-203ENST00000407019 MEF2CQ06413 473 aaPredicted RBP13.78□□□□□ -0.2
NUP50-203ENST00000407019 TXNDC17Q9BRA2 123 aa13.78□□□□□ -0.2
NUP50-203ENST00000407019 ZNRD1Q9P1U0 126 aa13.78□□□□□ -0.2
NUP50-203ENST00000407019 DYSFO75923 2080 aa13.77□□□□□ -0.2
NUP50-203ENST00000407019 J3QR06 171 aa13.77□□□□□ -0.21
NUP50-203ENST00000407019 PRCDQ00LT1 54 aa13.77□□□□□ -0.21
NUP50-203ENST00000407019 RAB31Q13636 194 aa13.77□□□□□ -0.21
NUP50-203ENST00000407019 C4orf17Q53FE4 359 aa13.77□□□□□ -0.21
NUP50-203ENST00000407019 ZCCHC24Q8N2G6 241 aaKnown RBP13.77□□□□□ -0.21
NUP50-203ENST00000407019 STPG3Q8N7X2 389 aa13.77□□□□□ -0.21
NUP50-203ENST00000407019 Q8NA96 180 aa13.77□□□□□ -0.21
NUP50-203ENST00000407019 OR51M1Q9H341 326 aa13.77□□□□□ -0.21
NUP50-203ENST00000407019 GSN-AS1Q9NRJ2 163 aa13.77□□□□□ -0.21
NUP50-203ENST00000407019 JKAMPQ9P055 326 aa13.77□□□□□ -0.21
NUP50-203ENST00000407019 BOD1L1Q8NFC6 3051 aa13.77□□□□□ -0.21
NUP50-203ENST00000407019 FNDC10F2Z333 226 aa13.76□□□□□ -0.21
NUP50-203ENST00000407019 IGKV1-16P04430 117 aa13.76□□□□□ -0.21
NUP50-203ENST00000407019 RPL31P62899 125 aaKnown RBP13.76□□□□□ -0.21
NUP50-203ENST00000407019 CTAG1AP78358 180 aa13.76□□□□□ -0.21
NUP50-203ENST00000407019 ZNF833PQ6ZTB9 187 aa13.76□□□□□ -0.21
NUP50-203ENST00000407019 SSX8Q7RTT4 187 aa13.76□□□□□ -0.21
NUP50-203ENST00000407019 HIST3H2BBQ8N257 126 aa13.76□□□□□ -0.21
NUP50-203ENST00000407019 SAP30LQ9HAJ7 183 aa13.76□□□□□ -0.21
NUP50-203ENST00000407019 NDUFB4O95168 129 aa13.76□□□□□ -0.21
NUP50-203ENST00000407019 SOD3P08294 240 aa13.76□□□□□ -0.21
NUP50-203ENST00000407019 RPL29P47914 159 aaKnown RBP13.76□□□□□ -0.21
NUP50-203ENST00000407019 NEUROG1Q92886 237 aa13.76□□□□□ -0.21
NUP50-203ENST00000407019 ZNF714Q96N38 554 aa13.76□□□□□ -0.21
NUP50-203ENST00000407019 ELOVL1Q9BW60 279 aa13.76□□□□□ -0.21
NUP50-203ENST00000407019 PPIAL4EA0A075B759 164 aa13.75□□□□□ -0.21
NUP50-203ENST00000407019 SRRM4A7MD48 611 aaKnown RBP13.75□□□□□ -0.21
NUP50-203ENST00000407019 PPP5D1E7EU14 171 aa13.75□□□□□ -0.21
NUP50-203ENST00000407019 PPIAL4DF5H284 164 aa13.75□□□□□ -0.21
NUP50-203ENST00000407019 PPIAL4FP0DN26 164 aa13.75□□□□□ -0.21
NUP50-203ENST00000407019 SRP14P37108 136 aaKnown RBP13.75□□□□□ -0.21
NUP50-203ENST00000407019 RHOBP62745 196 aa13.75□□□□□ -0.21
NUP50-203ENST00000407019 EFNB3Q15768 340 aa13.75□□□□□ -0.21
NUP50-203ENST00000407019 LINC01551Q86U37 167 aa13.75□□□□□ -0.21
NUP50-203ENST00000407019 OR5T1Q8NG75 326 aa13.75□□□□□ -0.21
NUP50-203ENST00000407019 OR4X1Q8NH49 305 aa13.75□□□□□ -0.21
NUP50-203ENST00000407019 RND1Q92730 232 aa13.75□□□□□ -0.21
NUP50-203ENST00000407019 FKBP11Q9NYL4 201 aa13.75□□□□□ -0.21
NUP50-203ENST00000407019 BET1LQ9NYM9 111 aa13.75□□□□□ -0.21
NUP50-203ENST00000407019 MIOXQ9UGB7 285 aa13.75□□□□□ -0.21
NUP50-203ENST00000407019 PPIAL4AQ9Y536 164 aa13.75□□□□□ -0.21
NUP50-203ENST00000407019 TMEM178BH3BS89 294 aa13.75□□□□□ -0.21
NUP50-203ENST00000407019 SAA1P0DJI8 122 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms