RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 IGHV4-4A0A075B6R2 117 aa8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 TMEM272A0A1B0GTI8 110 aa8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 DPPA5A6NC42 116 aa8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 OR2T8A6NH00 312 aa8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 MFNGO00587 321 aa8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 CIB2O75838 187 aa8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 DIRAS3O95661 229 aa8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 GNB3P16520 340 aa8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 PTBP1P26599 531 aaKnown RBP eCLIP8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 ADMP35318 185 aa8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 MAP2K4P45985 399 aa8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 OR2B8PP59922 312 aa8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 ARFRP1Q13795 201 aa8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 C2orf76Q3KRA6 126 aa8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 HSD17B12Q53GQ0 312 aa8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 PLET1Q6UQ28 207 aa8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 RNF2Q99496 336 aa8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 SMPD3Q9NY59 655 aaPredicted RBP8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 LSM2Q9Y333 95 aaKnown RBP8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 RBMX2Q9Y388 322 aaKnown RBP8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 RBM7Q9Y580 266 aaKnown RBP8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 ETV7Q9Y603 341 aa8.62□□□□□ -1.03
SPTLC1P3-201ENST00000403408 ELOA3CA0A087WX78 387 aaPredicted RBP8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 IGHV3-21A0A0B4J1V1 117 aa8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 OR4C46A6NHA9 309 aa8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 CREBL2O60519 120 aaPredicted RBP8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 GNAO1P09471 354 aa8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 HIST1H1BP16401 226 aaKnown RBP8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 NFYAP23511 347 aaPredicted RBP8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 HLA-DMBP28068 263 aa8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 TFPI2P48307 235 aa8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 PSMD7P51665 324 aa8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 IRF3Q14653 427 aa8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 RAB11BQ15907 218 aa8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 ZFP1Q6P2D0 407 aa8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 AHSA2Q719I0 299 aa8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 KCTD9Q7L273 389 aa8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 OR4A5Q8NH83 315 aa8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 FAM3DQ96BQ1 224 aa8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 CXorf58Q96LI9 332 aa8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 GINS4Q9BRT9 223 aa8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 DAZ1Q9NQZ3 744 aaKnown RBP8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 FKBP14Q9NWM8 211 aa8.61□□□□□ -1.03
SPTLC1P3-201ENST00000403408 IGHV3-49A0A0A0MS15 119 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 IGHV4-28A0A0C4DH34 117 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 MYL12BO14950 172 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 CA1P00915 261 aaPredicted RBP8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 HLA-DQB1P01920 261 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 HLA-GP17693 338 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 CRHBPP24387 322 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 MAS1LP35410 378 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 RPL8P62917 257 aaKnown RBP8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 MED22Q15528 200 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 FAM90A2PQ658T7 463 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 LAMTOR1Q6IAA8 161 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 ZNF773Q6PK81 442 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 Q6ZS49 121 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 PQLC1Q8N2U9 271 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 MS4A15Q8N5U1 240 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 FAM24BQ8N5W8 94 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 ZNF555Q8NEP9 628 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 OR10W1Q8NGF6 305 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 OR56B1Q8NGI3 324 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 CYGBQ8WWM9 190 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 TMEM203Q969S6 136 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 RAB3CQ96E17 227 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 HRH4Q9H3N8 390 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 PLGRKTQ9HBL7 147 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 S100A14Q9HCY8 104 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 SMPXQ9UHP9 88 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 NACAE9PAV3 2078 aa8.6□□□□□ -1.03
SPTLC1P3-201ENST00000403408 VPS13BQ7Z7G8 4022 aa8.59□□□□□ -1.03
SPTLC1P3-201ENST00000403408 IGKV3-7A0A075B6H7 116 aa8.59□□□□□ -1.03
SPTLC1P3-201ENST00000403408 A0A075B6Q4 140 aa8.59□□□□□ -1.03
SPTLC1P3-201ENST00000403408 C11orf94C9JXX5 98 aa8.59□□□□□ -1.03
SPTLC1P3-201ENST00000403408 CHEK1O14757 476 aa8.59□□□□□ -1.03
SPTLC1P3-201ENST00000403408 DENRO43583 198 aaKnown RBP8.59□□□□□ -1.03
SPTLC1P3-201ENST00000403408 DEFA4P12838 97 aa8.59□□□□□ -1.03
SPTLC1P3-201ENST00000403408 RASSF2P50749 326 aa8.59□□□□□ -1.03
SPTLC1P3-201ENST00000403408 RPS25P62851 125 aaKnown RBP8.59□□□□□ -1.03
SPTLC1P3-201ENST00000403408 Q6ZR54 194 aa8.59□□□□□ -1.03
SPTLC1P3-201ENST00000403408 ZNF767PQ75MW2 155 aa8.59□□□□□ -1.03
SPTLC1P3-201ENST00000403408 LILRB2Q8N423 598 aa8.59□□□□□ -1.03
SPTLC1P3-201ENST00000403408 POM121L12Q8N7R1 296 aa8.59□□□□□ -1.03
SPTLC1P3-201ENST00000403408 C20orf24Q9BUV8 137 aa8.59□□□□□ -1.03
SPTLC1P3-201ENST00000403408 SPATA2Q9UM82 520 aa8.59□□□□□ -1.03
SPTLC1P3-201ENST00000403408 CELA1Q9UNI1 258 aa8.59□□□□□ -1.03
SPTLC1P3-201ENST00000403408 SRRM2Q9UQ35 2752 aaKnown RBP8.59□□□□□ -1.03
SPTLC1P3-201ENST00000403408 K7EMT4 169 aa8.58□□□□□ -1.04
SPTLC1P3-201ENST00000403408 NDUFA4O00483 81 aa8.58□□□□□ -1.04
SPTLC1P3-201ENST00000403408 HIST1H1DP16402 221 aaKnown RBP8.58□□□□□ -1.04
SPTLC1P3-201ENST00000403408 WT1-ASQ06250 92 aa8.58□□□□□ -1.04
SPTLC1P3-201ENST00000403408 TMEM187Q14656 261 aa8.58□□□□□ -1.04
SPTLC1P3-201ENST00000403408 TIMM50Q3ZCQ8 353 aa8.58□□□□□ -1.04
SPTLC1P3-201ENST00000403408 HES5Q5TA89 166 aa8.58□□□□□ -1.04
SPTLC1P3-201ENST00000403408 MFSD4AQ8N468 514 aa8.58□□□□□ -1.04
SPTLC1P3-201ENST00000403408 GBGT1Q8N5D6 347 aa8.58□□□□□ -1.04
SPTLC1P3-201ENST00000403408 OR10R2Q8NGX6 335 aa8.58□□□□□ -1.04
SPTLC1P3-201ENST00000403408 OR4S2Q8NH73 311 aa8.58□□□□□ -1.04
SPTLC1P3-201ENST00000403408 VSTM2AQ8TAG5 236 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms