RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 FAM25GB3EWG6 89 aa10.49□□□□□ -0.73
CXCL12-205ENST00000395794 UPK2O00526 184 aa10.49□□□□□ -0.73
CXCL12-205ENST00000395794 GGCTO75223 188 aaKnown RBP10.49□□□□□ -0.73
CXCL12-205ENST00000395794 PGLYRP1O75594 196 aaPredicted RBP10.49□□□□□ -0.73
CXCL12-205ENST00000395794 RLN1P04808 185 aa10.49□□□□□ -0.73
CXCL12-205ENST00000395794 CRYGCP07315 174 aa10.49□□□□□ -0.73
CXCL12-205ENST00000395794 FRMD6-AS1P0C7T7 363 aa10.49□□□□□ -0.73
CXCL12-205ENST00000395794 AREGP15514 252 aa10.49□□□□□ -0.73
CXCL12-205ENST00000395794 HRH1P35367 487 aa10.49□□□□□ -0.73
CXCL12-205ENST00000395794 POU2AF1Q16633 256 aa10.49□□□□□ -0.73
CXCL12-205ENST00000395794 GTSCR1Q86UQ5 136 aa10.49□□□□□ -0.73
CXCL12-205ENST00000395794 SNX29P2Q8IUI4 249 aa10.49□□□□□ -0.73
CXCL12-205ENST00000395794 Q8N402 240 aa10.49□□□□□ -0.73
CXCL12-205ENST00000395794 EEF1AKMT3Q96AZ1 226 aa10.49□□□□□ -0.73
CXCL12-205ENST00000395794 ZMAT4Q9H898 229 aa10.49□□□□□ -0.73
CXCL12-205ENST00000395794 TMEM140Q9NV12 185 aa10.49□□□□□ -0.73
CXCL12-205ENST00000395794 SIGLEC8Q9NYZ4 499 aa10.49□□□□□ -0.73
CXCL12-205ENST00000395794 THYN1Q9P016 225 aa10.49□□□□□ -0.73
CXCL12-205ENST00000395794 ADAM30Q9UKF2 790 aa10.49□□□□□ -0.73
CXCL12-205ENST00000395794 E7EUB6 86 aa10.48□□□□□ -0.73
CXCL12-205ENST00000395794 BMPR1BO00238 502 aa10.48□□□□□ -0.73
CXCL12-205ENST00000395794 GPR31O00270 319 aa10.48□□□□□ -0.73
CXCL12-205ENST00000395794 HPGDSO60760 199 aa10.48□□□□□ -0.73
CXCL12-205ENST00000395794 S1PR2O95136 353 aa10.48□□□□□ -0.73
CXCL12-205ENST00000395794 REG1AP05451 166 aa10.48□□□□□ -0.73
CXCL12-205ENST00000395794 CSN3P07498 182 aa10.48□□□□□ -0.73
CXCL12-205ENST00000395794 FGF2P09038 288 aa10.48□□□□□ -0.73
CXCL12-205ENST00000395794 F2RP25116 425 aa10.48□□□□□ -0.73
CXCL12-205ENST00000395794 RCVRNP35243 200 aa10.48□□□□□ -0.73
CXCL12-205ENST00000395794 OR2B8PP59922 312 aa10.48□□□□□ -0.73
CXCL12-205ENST00000395794 IL34Q6ZMJ4 242 aa10.48□□□□□ -0.73
CXCL12-205ENST00000395794 LYSMD2Q8IV50 215 aa10.48□□□□□ -0.73
CXCL12-205ENST00000395794 GPX8Q8TED1 209 aa10.48□□□□□ -0.73
CXCL12-205ENST00000395794 DYNLRB2Q8TF09 96 aa10.48□□□□□ -0.73
CXCL12-205ENST00000395794 DGCR14Q96DF8 476 aaKnown RBP10.48□□□□□ -0.73
CXCL12-205ENST00000395794 CXorf58Q96LI9 332 aa10.48□□□□□ -0.73
CXCL12-205ENST00000395794 SRSF8Q9BRL6 282 aaKnown RBP10.48□□□□□ -0.73
CXCL12-205ENST00000395794 DNAH9Q9NYC9 4486 aa10.47□□□□□ -0.73
CXCL12-205ENST00000395794 PPP5D1E7EU14 171 aa10.47□□□□□ -0.73
CXCL12-205ENST00000395794 SNAPC5O75971 98 aa10.47□□□□□ -0.73
CXCL12-205ENST00000395794 NDUFB8O95169 186 aa10.47□□□□□ -0.73
CXCL12-205ENST00000395794 MYOD1P15172 320 aa10.47□□□□□ -0.73
CXCL12-205ENST00000395794 RPA2P15927 270 aa10.47□□□□□ -0.73
CXCL12-205ENST00000395794 CTRB1P17538 263 aa10.47□□□□□ -0.73
CXCL12-205ENST00000395794 ELK1P19419 428 aa10.47□□□□□ -0.73
CXCL12-205ENST00000395794 ARL3P36405 182 aa10.47□□□□□ -0.73
CXCL12-205ENST00000395794 CTRB2Q6GPI1 263 aa10.47□□□□□ -0.73
CXCL12-205ENST00000395794 THOC7Q6I9Y2 204 aaKnown RBP10.47□□□□□ -0.73
CXCL12-205ENST00000395794 CLEC19AQ6UXS0 136 aa10.47□□□□□ -0.73
CXCL12-205ENST00000395794 C19orf35Q6ZS72 473 aa10.47□□□□□ -0.73
CXCL12-205ENST00000395794 HSD17B13Q7Z5P4 300 aaPredicted RBP10.47□□□□□ -0.73
CXCL12-205ENST00000395794 SBSPONQ8IVN8 264 aa10.47□□□□□ -0.73
CXCL12-205ENST00000395794 OR2K2Q8NGT1 345 aa10.47□□□□□ -0.73
CXCL12-205ENST00000395794 QTRT1Q9BXR0 403 aaKnown RBP10.47□□□□□ -0.73
CXCL12-205ENST00000395794 TRBV7-1A0A0A6YYK4 115 aa10.46□□□□□ -0.73
CXCL12-205ENST00000395794 TRAV3A0A0B4J244 114 aa10.46□□□□□ -0.73
CXCL12-205ENST00000395794 A0A1B0GW64 132 aa10.46□□□□□ -0.73
CXCL12-205ENST00000395794 MARCH11A6NNE9 402 aa10.46□□□□□ -0.73
CXCL12-205ENST00000395794 OR2C1O95371 312 aa10.46□□□□□ -0.73
CXCL12-205ENST00000395794 KRASP01116 189 aa10.46□□□□□ -0.73
CXCL12-205ENST00000395794 IGHV3-23P01764 117 aa10.46□□□□□ -0.73
CXCL12-205ENST00000395794 IFNA6P05013 189 aa10.46□□□□□ -0.73
CXCL12-205ENST00000395794 TRAPPC2P0DI81 140 aa10.46□□□□□ -0.73
CXCL12-205ENST00000395794 TRAPPC2BP0DI82 140 aa10.46□□□□□ -0.73
CXCL12-205ENST00000395794 IGHV4-30-4P0DP06 118 aa10.46□□□□□ -0.73
CXCL12-205ENST00000395794 ZNF182P17025 639 aaPredicted RBP10.46□□□□□ -0.73
CXCL12-205ENST00000395794 LPAR6P43657 344 aa10.46□□□□□ -0.73
CXCL12-205ENST00000395794 FAM106AQ4KMX7 169 aa10.46□□□□□ -0.73
CXCL12-205ENST00000395794 PHLDA2Q53GA4 152 aa10.46□□□□□ -0.73
CXCL12-205ENST00000395794 GPR107Q5VW38 600 aa10.46□□□□□ -0.73
CXCL12-205ENST00000395794 OR1L8Q8NGR8 309 aa10.46□□□□□ -0.73
CXCL12-205ENST00000395794 C15orf40Q8WUR7 153 aa10.46□□□□□ -0.73
CXCL12-205ENST00000395794 FANCD2OSQ96PS1 177 aa10.46□□□□□ -0.73
CXCL12-205ENST00000395794 TUBA4BQ9H853 241 aa10.46□□□□□ -0.73
CXCL12-205ENST00000395794 ZNF320A2RRD8 509 aa10.45□□□□□ -0.74
CXCL12-205ENST00000395794 GABARAPO95166 117 aa10.45□□□□□ -0.74
CXCL12-205ENST00000395794 HLA-AP01891 365 aaKnown RBP10.45□□□□□ -0.74
CXCL12-205ENST00000395794 GPHB5Q86YW7 130 aa10.45□□□□□ -0.74
CXCL12-205ENST00000395794 SLC38A6Q8IZM9 456 aa10.45□□□□□ -0.74
CXCL12-205ENST00000395794 Q8N1Y9 231 aa10.45□□□□□ -0.74
CXCL12-205ENST00000395794 FCAMRQ8WWV6 532 aa10.45□□□□□ -0.74
CXCL12-205ENST00000395794 RCHY1Q96PM5 261 aa10.45□□□□□ -0.74
CXCL12-205ENST00000395794 HINT2Q9BX68 163 aa10.45□□□□□ -0.74
CXCL12-205ENST00000395794 MRPS26Q9BYN8 205 aaKnown RBP10.45□□□□□ -0.74
CXCL12-205ENST00000395794 FXYD6Q9H0Q3 95 aa10.45□□□□□ -0.74
CXCL12-205ENST00000395794 FKBP11Q9NYL4 201 aa10.45□□□□□ -0.74
CXCL12-205ENST00000395794 S4R3C0 116 aa10.45□□□□□ -0.74
CXCL12-205ENST00000395794 IGLV11-55A0A075B6I3 123 aa10.44□□□□□ -0.74
CXCL12-205ENST00000395794 TEX50A0A1B0GTY4 177 aa10.44□□□□□ -0.74
CXCL12-205ENST00000395794 IGLC7A0M8Q6 106 aa10.44□□□□□ -0.74
CXCL12-205ENST00000395794 CGB1A6NKQ9 187 aa10.44□□□□□ -0.74
CXCL12-205ENST00000395794 A8MZ25 164 aa10.44□□□□□ -0.74
CXCL12-205ENST00000395794 LGALS9O00182 355 aa10.44□□□□□ -0.74
CXCL12-205ENST00000395794 CLEC3BP05452 202 aa10.44□□□□□ -0.74
CXCL12-205ENST00000395794 SMIM18P0DKX4 95 aa10.44□□□□□ -0.74
CXCL12-205ENST00000395794 OR13C7P0DN81 318 aa10.44□□□□□ -0.74
CXCL12-205ENST00000395794 FOLR2P14207 255 aa10.44□□□□□ -0.74
CXCL12-205ENST00000395794 G6PCP35575 357 aa10.44□□□□□ -0.74
CXCL12-205ENST00000395794 MECP2P51608 486 aaKnown RBP10.44□□□□□ -0.74
CXCL12-205ENST00000395794 CTF1Q16619 201 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms