RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 LHX4Q969G2 390 aa15.61■□□□□ 0.09
LMNB1-202ENST00000395354 PARP11Q9NR21 331 aa15.61■□□□□ 0.09
LMNB1-202ENST00000395354 NUP50Q9UKX7 468 aa15.61■□□□□ 0.09
LMNB1-202ENST00000395354 AKAP9Q99996 3911 aa15.6■□□□□ 0.09
LMNB1-202ENST00000395354 ENSAO43768 121 aaKnown RBP15.6■□□□□ 0.09
LMNB1-202ENST00000395354 TGFAP01135 160 aa15.6■□□□□ 0.09
LMNB1-202ENST00000395354 IGKV1-16P04430 117 aa15.6■□□□□ 0.09
LMNB1-202ENST00000395354 HAPLN4Q86UW8 402 aa15.6■□□□□ 0.09
LMNB1-202ENST00000395354 KIR3DL3Q8N743 410 aa15.6■□□□□ 0.09
LMNB1-202ENST00000395354 OR4C13Q8NGP0 309 aa15.6■□□□□ 0.09
LMNB1-202ENST00000395354 ZDHHC16Q969W1 377 aa15.6■□□□□ 0.09
LMNB1-202ENST00000395354 MARC2Q969Z3 335 aa15.6■□□□□ 0.09
LMNB1-202ENST00000395354 FLYWCH2Q96CP2 140 aaKnown RBP15.6■□□□□ 0.09
LMNB1-202ENST00000395354 OR4C12Q96R67 309 aa15.6■□□□□ 0.09
LMNB1-202ENST00000395354 FKBP11Q9NYL4 201 aa15.6■□□□□ 0.09
LMNB1-202ENST00000395354 PLA2G2EQ9NZK7 142 aa15.6■□□□□ 0.09
LMNB1-202ENST00000395354 ZNF257Q9Y2Q1 563 aa15.6■□□□□ 0.09
LMNB1-202ENST00000395354 WASHC3Q9Y3C0 194 aa15.6■□□□□ 0.09
LMNB1-202ENST00000395354 MAST4O15021 2626 aa15.6■□□□□ 0.09
LMNB1-202ENST00000395354 TLN2Q9Y4G6 2542 aa15.59■□□□□ 0.09
LMNB1-202ENST00000395354 TRAV3A0A0B4J244 114 aa15.59■□□□□ 0.09
LMNB1-202ENST00000395354 IGHV2-70DA0A0C4DH43 119 aa15.59■□□□□ 0.09
LMNB1-202ENST00000395354 RAB19A4D1S5 217 aa15.59■□□□□ 0.09
LMNB1-202ENST00000395354 UMAD1C9J7I0 102 aa15.59■□□□□ 0.09
LMNB1-202ENST00000395354 TRIM77I1YAP6 450 aa15.59■□□□□ 0.09
LMNB1-202ENST00000395354 UPK2O00526 184 aa15.59■□□□□ 0.09
LMNB1-202ENST00000395354 SHOXO15266 292 aa15.59■□□□□ 0.09
LMNB1-202ENST00000395354 ARG1P05089 322 aa15.59■□□□□ 0.09
LMNB1-202ENST00000395354 OR8U8P0C7N1 319 aa15.59■□□□□ 0.09
LMNB1-202ENST00000395354 ATP6V0CP27449 155 aa15.59■□□□□ 0.09
LMNB1-202ENST00000395354 HSPE1P61604 102 aaKnown RBP15.59■□□□□ 0.09
LMNB1-202ENST00000395354 ARL16Q0P5N6 197 aa15.59■□□□□ 0.09
LMNB1-202ENST00000395354 OR4A5Q8NH83 315 aa15.59■□□□□ 0.09
LMNB1-202ENST00000395354 PINX1Q96BK5 328 aaKnown RBP15.59■□□□□ 0.09
LMNB1-202ENST00000395354 HIPK2Q9H2X6 1198 aa15.59■□□□□ 0.09
LMNB1-202ENST00000395354 ONECUT1Q9UBC0 465 aa15.59■□□□□ 0.09
LMNB1-202ENST00000395354 TCF19Q9Y242 345 aa15.59■□□□□ 0.09
LMNB1-202ENST00000395354 TRAV20A0A0B4J274 112 aa15.58■□□□□ 0.09
LMNB1-202ENST00000395354 BUB1B-PAK6H3BSN5 160 aa15.58■□□□□ 0.09
LMNB1-202ENST00000395354 H7C2Y5 167 aa15.58■□□□□ 0.09
LMNB1-202ENST00000395354 I3L521 148 aa15.58■□□□□ 0.09
LMNB1-202ENST00000395354 VDAC2P45880 294 aaPredicted RBP15.58■□□□□ 0.09
LMNB1-202ENST00000395354 SLC38A11Q08AI6 406 aa15.58■□□□□ 0.09
LMNB1-202ENST00000395354 UQCC3Q6UW78 93 aa15.58■□□□□ 0.09
LMNB1-202ENST00000395354 IL34Q6ZMJ4 242 aa15.58■□□□□ 0.09
LMNB1-202ENST00000395354 LILRB2Q8N423 598 aa15.58■□□□□ 0.09
LMNB1-202ENST00000395354 SH3BGRL3Q9H299 93 aa15.58■□□□□ 0.09
LMNB1-202ENST00000395354 HIF1ANQ9NWT6 349 aa15.58■□□□□ 0.09
LMNB1-202ENST00000395354 SRRM4A7MD48 611 aaKnown RBP15.58■□□□□ 0.08
LMNB1-202ENST00000395354 PMS2P5A8MQ11 134 aa15.58■□□□□ 0.08
LMNB1-202ENST00000395354 REG1BP48304 166 aa15.58■□□□□ 0.08
LMNB1-202ENST00000395354 TOR2AQ5JU69 321 aa15.58■□□□□ 0.08
LMNB1-202ENST00000395354 PXDC1Q5TGL8 231 aa15.58■□□□□ 0.08
LMNB1-202ENST00000395354 Q8N7P7 452 aa15.58■□□□□ 0.08
LMNB1-202ENST00000395354 OR10P1Q8NGE3 313 aa15.58■□□□□ 0.08
LMNB1-202ENST00000395354 OR2G3Q8NGZ4 309 aa15.58■□□□□ 0.08
LMNB1-202ENST00000395354 VSTM2AQ8TAG5 236 aa15.58■□□□□ 0.08
LMNB1-202ENST00000395354 SCGB1C1Q8TD33 95 aa15.58■□□□□ 0.08
LMNB1-202ENST00000395354 HARBI1Q96MB7 349 aa15.58■□□□□ 0.08
LMNB1-202ENST00000395354 INSIG2Q9Y5U4 225 aa15.58■□□□□ 0.08
LMNB1-202ENST00000395354 ZNF469Q96JG9 3925 aaPredicted RBP15.57■□□□□ 0.08
LMNB1-202ENST00000395354 KBTBD11O94819 623 aa15.57■□□□□ 0.08
LMNB1-202ENST00000395354 CD99P14209 185 aa15.57■□□□□ 0.08
LMNB1-202ENST00000395354 DVL1P1P54792 670 aaPredicted RBP15.57■□□□□ 0.08
LMNB1-202ENST00000395354 ARF6P62330 175 aa15.57■□□□□ 0.08
LMNB1-202ENST00000395354 DIAPH2-AS1Q14236 149 aa15.57■□□□□ 0.08
LMNB1-202ENST00000395354 LRRC75BQ2VPJ9 315 aa15.57■□□□□ 0.08
LMNB1-202ENST00000395354 OR11H6Q8NGC7 330 aa15.57■□□□□ 0.08
LMNB1-202ENST00000395354 LYPD6BQ8NI32 183 aa15.57■□□□□ 0.08
LMNB1-202ENST00000395354 TMUB1Q9BVT8 246 aa15.57■□□□□ 0.08
LMNB1-202ENST00000395354 C15orf62A8K5M9 175 aa15.56■□□□□ 0.08
LMNB1-202ENST00000395354 SAA1P0DJI8 122 aaPredicted RBP15.56■□□□□ 0.08
LMNB1-202ENST00000395354 PRTN3P24158 256 aa15.56■□□□□ 0.08
LMNB1-202ENST00000395354 LGALS7P47929 136 aa15.56■□□□□ 0.08
LMNB1-202ENST00000395354 F2RL1P55085 397 aa15.56■□□□□ 0.08
LMNB1-202ENST00000395354 SLC25A24Q6NUK1 477 aa15.56■□□□□ 0.08
LMNB1-202ENST00000395354 BTNL8Q6UX41 500 aa15.56■□□□□ 0.08
LMNB1-202ENST00000395354 OR4P4Q8NGL7 312 aa15.56■□□□□ 0.08
LMNB1-202ENST00000395354 PSMG3Q9BT73 122 aaPredicted RBP15.56■□□□□ 0.08
LMNB1-202ENST00000395354 TMEM147Q9BVK8 224 aa15.56■□□□□ 0.08
LMNB1-202ENST00000395354 HEYLQ9NQ87 328 aaPredicted RBP15.56■□□□□ 0.08
LMNB1-202ENST00000395354 OR51B2Q9Y5P1 312 aa15.56■□□□□ 0.08
LMNB1-202ENST00000395354 KRBOX1C9JBD0 128 aa15.55■□□□□ 0.08
LMNB1-202ENST00000395354 LY6LH3BQJ8 138 aa15.55■□□□□ 0.08
LMNB1-202ENST00000395354 GATA3P23771 443 aa15.55■□□□□ 0.08
LMNB1-202ENST00000395354 HOXA1P49639 335 aaPredicted RBP15.55■□□□□ 0.08
LMNB1-202ENST00000395354 PAX8Q06710 450 aa15.55■□□□□ 0.08
LMNB1-202ENST00000395354 VWC2Q2TAL6 325 aa15.55■□□□□ 0.08
LMNB1-202ENST00000395354 SPINK9Q5DT21 86 aa15.55■□□□□ 0.08
LMNB1-202ENST00000395354 OR8G2PQ6IF36 304 aa15.55■□□□□ 0.08
LMNB1-202ENST00000395354 DPPA3Q6W0C5 159 aa15.55■□□□□ 0.08
LMNB1-202ENST00000395354 Q6ZRG5 221 aa15.55■□□□□ 0.08
LMNB1-202ENST00000395354 OR5B3Q8NH48 314 aa15.55■□□□□ 0.08
LMNB1-202ENST00000395354 MS4A7Q9GZW8 240 aaPredicted RBP15.55■□□□□ 0.08
LMNB1-202ENST00000395354 UNKLQ9H9P5 680 aaKnown RBP15.55■□□□□ 0.08
LMNB1-202ENST00000395354 ENY2Q9NPA8 101 aa15.55■□□□□ 0.08
LMNB1-202ENST00000395354 KPTNQ9Y664 436 aa15.55■□□□□ 0.08
LMNB1-202ENST00000395354 HIVEP1P15822 2718 aa15.55■□□□□ 0.08
LMNB1-202ENST00000395354 TEX46H3BTG2 121 aa15.54■□□□□ 0.08
LMNB1-202ENST00000395354 FOSL1P15407 271 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms